RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 DHRS7BQ6IAN0 325 aaPredicted RBP8.23□□□□□ -1.09
SS18-221ENST00000582448 FAM71F2Q6NXP2 309 aa8.23□□□□□ -1.09
SS18-221ENST00000582448 ZNF841Q6ZN19 808 aa8.23□□□□□ -1.09
SS18-221ENST00000582448 OR8H3Q8N146 312 aa8.23□□□□□ -1.09
SS18-221ENST00000582448 ABHD12Q8N2K0 398 aa8.23□□□□□ -1.09
SS18-221ENST00000582448 LINC00311Q8N616 119 aa8.23□□□□□ -1.09
SS18-221ENST00000582448 DMBX1Q8NFW5 382 aa8.23□□□□□ -1.09
SS18-221ENST00000582448 OR4F5Q8NH21 305 aa8.23□□□□□ -1.09
SS18-221ENST00000582448 C8orf46Q8TAG6 207 aa8.23□□□□□ -1.09
SS18-221ENST00000582448 R3HDM4Q96D70 268 aa8.23□□□□□ -1.09
SS18-221ENST00000582448 PHYHIPLQ96FC7 376 aa8.23□□□□□ -1.09
SS18-221ENST00000582448 RAB40CQ96S21 281 aa8.23□□□□□ -1.09
SS18-221ENST00000582448 A0A087X0M5 115 aa8.22□□□□□ -1.09
SS18-221ENST00000582448 TRAV40A0A0B4J280 105 aa8.22□□□□□ -1.09
SS18-221ENST00000582448 A0A1B0GX30 115 aa8.22□□□□□ -1.09
SS18-221ENST00000582448 J3QR06 171 aa8.22□□□□□ -1.09
SS18-221ENST00000582448 TIMM23O14925 209 aa8.22□□□□□ -1.09
SS18-221ENST00000582448 MMP23AO75900 390 aa8.22□□□□□ -1.09
SS18-221ENST00000582448 JTBO76095 146 aa8.22□□□□□ -1.09
SS18-221ENST00000582448 IGKV1-39P01597 117 aa8.22□□□□□ -1.09
SS18-221ENST00000582448 IGKV1-5P01602 117 aa8.22□□□□□ -1.09
SS18-221ENST00000582448 IGKV1D-39P04432 117 aa8.22□□□□□ -1.09
SS18-221ENST00000582448 G6PCP35575 357 aa8.22□□□□□ -1.09
SS18-221ENST00000582448 POLR2GP62487 172 aaKnown RBP eCLIP8.22□□□□□ -1.09
SS18-221ENST00000582448 PAX8Q06710 450 aa8.22□□□□□ -1.09
SS18-221ENST00000582448 EXOSC2Q13868 293 aaKnown RBP8.22□□□□□ -1.09
SS18-221ENST00000582448 CXorf66Q5JRM2 361 aaPredicted RBP8.22□□□□□ -1.09
SS18-221ENST00000582448 NCR3LG1Q68D85 454 aa8.22□□□□□ -1.09
SS18-221ENST00000582448 BRD3OSQ6XYD6 125 aa8.22□□□□□ -1.09
SS18-221ENST00000582448 STX12Q86Y82 276 aa8.22□□□□□ -1.09
SS18-221ENST00000582448 OR2C3Q8N628 320 aa8.22□□□□□ -1.09
SS18-221ENST00000582448 OR13D1Q8NGV5 346 aa8.22□□□□□ -1.09
SS18-221ENST00000582448 OR4A16Q8NH70 328 aa8.22□□□□□ -1.09
SS18-221ENST00000582448 FAM110DQ8TAY7 271 aaPredicted RBP8.22□□□□□ -1.09
SS18-221ENST00000582448 C5orf30Q96GV9 206 aa8.22□□□□□ -1.09
SS18-221ENST00000582448 CIB3Q96Q77 187 aaPredicted RBP8.22□□□□□ -1.09
SS18-221ENST00000582448 MAGT1Q9H0U3 335 aa8.22□□□□□ -1.09
SS18-221ENST00000582448 HEXA-AS1Q9H8Q6 139 aa8.22□□□□□ -1.09
SS18-221ENST00000582448 A0A1B0GUS0 222 aa8.21□□□□□ -1.1
SS18-221ENST00000582448 H7C2Y5 167 aa8.21□□□□□ -1.1
SS18-221ENST00000582448 M0R1W7 72 aa8.21□□□□□ -1.1
SS18-221ENST00000582448 TXNL1O43396 289 aa8.21□□□□□ -1.1
SS18-221ENST00000582448 SYNGR2O43760 224 aa8.21□□□□□ -1.1
SS18-221ENST00000582448 ENSAO43768 121 aaKnown RBP8.21□□□□□ -1.1
SS18-221ENST00000582448 CHST1O43916 411 aa8.21□□□□□ -1.1
SS18-221ENST00000582448 PITX3O75364 302 aa8.21□□□□□ -1.1
SS18-221ENST00000582448 SCAF4O95104 1147 aaKnown RBP8.21□□□□□ -1.1
SS18-221ENST00000582448 MC5RP33032 325 aa8.21□□□□□ -1.1
SS18-221ENST00000582448 HTR2BP41595 481 aa8.21□□□□□ -1.1
SS18-221ENST00000582448 DLX6P56179 175 aa8.21□□□□□ -1.1
SS18-221ENST00000582448 TAS2R30P59541 319 aa8.21□□□□□ -1.1
SS18-221ENST00000582448 BAXQ07812 192 aa8.21□□□□□ -1.1
SS18-221ENST00000582448 ZNF833PQ6ZTB9 187 aa8.21□□□□□ -1.1
SS18-221ENST00000582448 TGIF2LXQ8IUE1 241 aa8.21□□□□□ -1.1
SS18-221ENST00000582448 ZNF596Q8TC21 504 aa8.21□□□□□ -1.1
SS18-221ENST00000582448 SCARB1Q8WTV0 552 aa8.21□□□□□ -1.1
SS18-221ENST00000582448 CLEC7AQ9BXN2 247 aa8.21□□□□□ -1.1
SS18-221ENST00000582448 SLC35D1Q9NTN3 355 aa8.21□□□□□ -1.1
SS18-221ENST00000582448 LYRM2Q9NU23 88 aaPredicted RBP8.21□□□□□ -1.1
SS18-221ENST00000582448 A0A0G2JRQ6 117 aa8.2□□□□□ -1.1
SS18-221ENST00000582448 CLPSL1A2RUU4 121 aa8.2□□□□□ -1.1
SS18-221ENST00000582448 FCN3O75636 299 aa8.2□□□□□ -1.1
SS18-221ENST00000582448 NXPH3O95157 252 aa8.2□□□□□ -1.1
SS18-221ENST00000582448 CRYZL1O95825 349 aa8.2□□□□□ -1.1
SS18-221ENST00000582448 CEACAM3P40198 252 aa8.2□□□□□ -1.1
SS18-221ENST00000582448 RAB13P51153 203 aa8.2□□□□□ -1.1
SS18-221ENST00000582448 KRTAP10-3P60369 221 aa8.2□□□□□ -1.1
SS18-221ENST00000582448 RPP30P78346 268 aaKnown RBP8.2□□□□□ -1.1
SS18-221ENST00000582448 BAP18Q8IXM2 172 aa8.2□□□□□ -1.1
SS18-221ENST00000582448 LY6G5BQ8NDX9 201 aa8.2□□□□□ -1.1
SS18-221ENST00000582448 STOML3Q8TAV4 291 aa8.2□□□□□ -1.1
SS18-221ENST00000582448 LRRC20Q8TCA0 184 aa8.2□□□□□ -1.1
SS18-221ENST00000582448 RAX2Q96IS3 184 aa8.2□□□□□ -1.1
SS18-221ENST00000582448 CITED1Q99966 193 aa8.2□□□□□ -1.1
SS18-221ENST00000582448 PCGF1Q9BSM1 259 aa8.2□□□□□ -1.1
SS18-221ENST00000582448 C1RLQ9NZP8 487 aa8.2□□□□□ -1.1
SS18-221ENST00000582448 WSB1Q9Y6I7 421 aa8.2□□□□□ -1.1
SS18-221ENST00000582448 TANC2Q9HCD6 1990 aa8.2□□□□□ -1.1
SS18-221ENST00000582448 PRKDCP78527 4128 aaKnown RBP8.19□□□□□ -1.1
SS18-221ENST00000582448 IGHV2-26A0A0B4J1V2 119 aa8.19□□□□□ -1.1
SS18-221ENST00000582448 MSGN1A6NI15 193 aa8.19□□□□□ -1.1
SS18-221ENST00000582448 CEBPZOSA8MTT3 80 aa8.19□□□□□ -1.1
SS18-221ENST00000582448 PROP1O75360 226 aa8.19□□□□□ -1.1
SS18-221ENST00000582448 IFNA17P01571 189 aa8.19□□□□□ -1.1
SS18-221ENST00000582448 GAPDHP04406 335 aaKnown RBP8.19□□□□□ -1.1
SS18-221ENST00000582448 CT45A6P0DMU7 189 aa8.19□□□□□ -1.1
SS18-221ENST00000582448 CT45A5P0DMU8 189 aa8.19□□□□□ -1.1
SS18-221ENST00000582448 CT45A7P0DMV0 189 aa8.19□□□□□ -1.1
SS18-221ENST00000582448 UBE2KP61086 200 aa8.19□□□□□ -1.1
SS18-221ENST00000582448 HBG1P69891 147 aa8.19□□□□□ -1.1
SS18-221ENST00000582448 HBG2P69892 147 aa8.19□□□□□ -1.1
SS18-221ENST00000582448 EWSR1Q01844 656 aaKnown RBP eCLIP8.19□□□□□ -1.1
SS18-221ENST00000582448 TNFRSF9Q07011 255 aa8.19□□□□□ -1.1
SS18-221ENST00000582448 ZNF266Q14584 549 aa8.19□□□□□ -1.1
SS18-221ENST00000582448 RUSC1-AS1Q66K80 236 aa8.19□□□□□ -1.1
SS18-221ENST00000582448 ALKAL2Q6UX46 152 aa8.19□□□□□ -1.1
SS18-221ENST00000582448 C1orf122Q6ZSJ8 110 aa8.19□□□□□ -1.1
SS18-221ENST00000582448 SSX9Q7RTT3 188 aa8.19□□□□□ -1.1
SS18-221ENST00000582448 ODF3L1Q8IXM7 274 aa8.19□□□□□ -1.1
SS18-221ENST00000582448 ZNF383Q8NA42 475 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms