RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 METTL15P1P0C7V9 234 aa10.07□□□□□ -0.8
SRSF1-204ENST00000581979 MYOD1P15172 320 aa10.07□□□□□ -0.8
SRSF1-204ENST00000581979 CD1BP29016 333 aa10.07□□□□□ -0.8
SRSF1-204ENST00000581979 DYNLT3P51808 116 aa10.07□□□□□ -0.8
SRSF1-204ENST00000581979 HSPE1P61604 102 aaKnown RBP10.07□□□□□ -0.8
SRSF1-204ENST00000581979 TUSC1Q2TAM9 212 aa10.07□□□□□ -0.8
SRSF1-204ENST00000581979 PDLIM3Q53GG5 364 aaPredicted RBP10.07□□□□□ -0.8
SRSF1-204ENST00000581979 BAP18Q8IXM2 172 aa10.07□□□□□ -0.8
SRSF1-204ENST00000581979 TMEM217Q8N7C4 229 aa10.07□□□□□ -0.8
SRSF1-204ENST00000581979 OR1S2Q8NGQ3 325 aa10.07□□□□□ -0.8
SRSF1-204ENST00000581979 OR5C1Q8NGR4 320 aa10.07□□□□□ -0.8
SRSF1-204ENST00000581979 TMEM167AQ8TBQ9 72 aa10.07□□□□□ -0.8
SRSF1-204ENST00000581979 SCARB1Q8WTV0 552 aa10.07□□□□□ -0.8
SRSF1-204ENST00000581979 RITA1Q96K30 269 aa10.07□□□□□ -0.8
SRSF1-204ENST00000581979 TSNAXQ99598 290 aaKnown RBP10.07□□□□□ -0.8
SRSF1-204ENST00000581979 HINT2Q9BX68 163 aa10.07□□□□□ -0.8
SRSF1-204ENST00000581979 STRAPQ9Y3F4 350 aaKnown RBP10.07□□□□□ -0.8
SRSF1-204ENST00000581979 AUP1Q9Y679 476 aa10.07□□□□□ -0.8
SRSF1-204ENST00000581979 TENM1Q9UKZ4 2725 aa10.07□□□□□ -0.8
SRSF1-204ENST00000581979 NPFFO15130 113 aa10.07□□□□□ -0.8
SRSF1-204ENST00000581979 OPN1MWP04001 364 aa10.07□□□□□ -0.8
SRSF1-204ENST00000581979 OPN1MW2P0DN77 364 aa10.07□□□□□ -0.8
SRSF1-204ENST00000581979 OPN1MW3P0DN78 364 aa10.07□□□□□ -0.8
SRSF1-204ENST00000581979 PAX6P26367 422 aa10.07□□□□□ -0.8
SRSF1-204ENST00000581979 HTR2BP41595 481 aa10.07□□□□□ -0.8
SRSF1-204ENST00000581979 RPP30P78346 268 aaKnown RBP10.07□□□□□ -0.8
SRSF1-204ENST00000581979 CLINT1Q14677 625 aa10.07□□□□□ -0.8
SRSF1-204ENST00000581979 CFHR4Q92496 578 aa10.07□□□□□ -0.8
SRSF1-204ENST00000581979 PHYHIPLQ96FC7 376 aa10.07□□□□□ -0.8
SRSF1-204ENST00000581979 RNF5Q99942 180 aa10.07□□□□□ -0.8
SRSF1-204ENST00000581979 COMMD5Q9GZQ3 224 aa10.07□□□□□ -0.8
SRSF1-204ENST00000581979 WFDC1Q9HC57 220 aa10.07□□□□□ -0.8
SRSF1-204ENST00000581979 HEYLQ9NQ87 328 aaPredicted RBP10.07□□□□□ -0.8
SRSF1-204ENST00000581979 ZNF257Q9Y2Q1 563 aa10.07□□□□□ -0.8
SRSF1-204ENST00000581979 CENPVL3A0A0U1RRI6 287 aa10.06□□□□□ -0.8
SRSF1-204ENST00000581979 TEX50A0A1B0GTY4 177 aa10.06□□□□□ -0.8
SRSF1-204ENST00000581979 TRIM77I1YAP6 450 aa10.06□□□□□ -0.8
SRSF1-204ENST00000581979 IGKV1D-33P01593 117 aa10.06□□□□□ -0.8
SRSF1-204ENST00000581979 IGKV1-33P01594 117 aa10.06□□□□□ -0.8
SRSF1-204ENST00000581979 CNTFRP26992 372 aa10.06□□□□□ -0.8
SRSF1-204ENST00000581979 SAA4P35542 130 aa10.06□□□□□ -0.8
SRSF1-204ENST00000581979 COMPP49747 757 aaPredicted RBP10.06□□□□□ -0.8
SRSF1-204ENST00000581979 RPL8P62917 257 aaKnown RBP10.06□□□□□ -0.8
SRSF1-204ENST00000581979 HBG1P69891 147 aa10.06□□□□□ -0.8
SRSF1-204ENST00000581979 HBG2P69892 147 aa10.06□□□□□ -0.8
SRSF1-204ENST00000581979 PSG5Q15238 335 aa10.06□□□□□ -0.8
SRSF1-204ENST00000581979 TMEM14EPQ6UXP3 125 aa10.06□□□□□ -0.8
SRSF1-204ENST00000581979 DYNAPQ8N1N2 210 aa10.06□□□□□ -0.8
SRSF1-204ENST00000581979 TEX45Q8NA69 505 aa10.06□□□□□ -0.8
SRSF1-204ENST00000581979 OR5B3Q8NH48 314 aa10.06□□□□□ -0.8
SRSF1-204ENST00000581979 C17orf50Q8WW18 174 aa10.06□□□□□ -0.8
SRSF1-204ENST00000581979 MALSU1Q96EH3 234 aa10.06□□□□□ -0.8
SRSF1-204ENST00000581979 OR4C12Q96R67 309 aa10.06□□□□□ -0.8
SRSF1-204ENST00000581979 NBEAL1Q6ZS30 2694 aa10.05□□□□□ -0.8
SRSF1-204ENST00000581979 TMEM89A2RUT3 159 aa10.05□□□□□ -0.8
SRSF1-204ENST00000581979 MOSP00540 346 aa10.05□□□□□ -0.8
SRSF1-204ENST00000581979 IFNA10P01566 189 aa10.05□□□□□ -0.8
SRSF1-204ENST00000581979 VDAC2P45880 294 aaPredicted RBP10.05□□□□□ -0.8
SRSF1-204ENST00000581979 RAB14P61106 215 aa10.05□□□□□ -0.8
SRSF1-204ENST00000581979 PRCDQ00LT1 54 aa10.05□□□□□ -0.8
SRSF1-204ENST00000581979 HES1Q14469 280 aa10.05□□□□□ -0.8
SRSF1-204ENST00000581979 HABP2Q14520 560 aaPredicted RBP10.05□□□□□ -0.8
SRSF1-204ENST00000581979 ZNF266Q14584 549 aa10.05□□□□□ -0.8
SRSF1-204ENST00000581979 LILRB2Q8N423 598 aa10.05□□□□□ -0.8
SRSF1-204ENST00000581979 ZNF430Q9H8G1 570 aaPredicted RBP10.05□□□□□ -0.8
SRSF1-204ENST00000581979 PLEKHA3Q9HB20 300 aa10.05□□□□□ -0.8
SRSF1-204ENST00000581979 METTL1Q9UBP6 276 aaKnown RBP10.05□□□□□ -0.8
SRSF1-204ENST00000581979 IGHV3OR16-10A0A075B7F0 116 aa10.04□□□□□ -0.8
SRSF1-204ENST00000581979 TRAV40A0A0B4J280 105 aa10.04□□□□□ -0.8
SRSF1-204ENST00000581979 IGHV1-69DA0A0B4J2H0 117 aa10.04□□□□□ -0.8
SRSF1-204ENST00000581979 DFFBO76075 338 aa10.04□□□□□ -0.8
SRSF1-204ENST00000581979 IGHV1-69P01742 117 aa10.04□□□□□ -0.8
SRSF1-204ENST00000581979 SNRNP70P08621 437 aaKnown RBP10.04□□□□□ -0.8
SRSF1-204ENST00000581979 CD24P25063 80 aa10.04□□□□□ -0.8
SRSF1-204ENST00000581979 PLGLAQ15195 96 aa10.04□□□□□ -0.8
SRSF1-204ENST00000581979 MMDQ15546 238 aa10.04□□□□□ -0.8
SRSF1-204ENST00000581979 KLF17Q5JT82 389 aaPredicted RBP10.04□□□□□ -0.8
SRSF1-204ENST00000581979 OR8G2PQ6IF36 304 aa10.04□□□□□ -0.8
SRSF1-204ENST00000581979 C12orf54Q6X4T0 127 aa10.04□□□□□ -0.8
SRSF1-204ENST00000581979 UBAC2Q8NBM4 344 aa10.04□□□□□ -0.8
SRSF1-204ENST00000581979 OR1L8Q8NGR8 309 aa10.04□□□□□ -0.8
SRSF1-204ENST00000581979 OR2T10Q8NGZ9 312 aa10.04□□□□□ -0.8
SRSF1-204ENST00000581979 ATP5SQ99766 215 aa10.04□□□□□ -0.8
SRSF1-204ENST00000581979 ESM1Q9NQ30 184 aa10.04□□□□□ -0.8
SRSF1-204ENST00000581979 TPSG1Q9NRR2 321 aa10.04□□□□□ -0.8
SRSF1-204ENST00000581979 CRYGBP07316 175 aa10.04□□□□□ -0.8
SRSF1-204ENST00000581979 OR8U8P0C7N1 319 aa10.04□□□□□ -0.8
SRSF1-204ENST00000581979 F2RL1P55085 397 aa10.04□□□□□ -0.8
SRSF1-204ENST00000581979 SLC38A11Q08AI6 406 aa10.04□□□□□ -0.8
SRSF1-204ENST00000581979 ARL16Q0P5N6 197 aa10.04□□□□□ -0.8
SRSF1-204ENST00000581979 HNF4GQ14541 408 aa10.04□□□□□ -0.8
SRSF1-204ENST00000581979 NDUFA5Q16718 116 aa10.04□□□□□ -0.8
SRSF1-204ENST00000581979 RUSC1-AS1Q66K80 236 aa10.04□□□□□ -0.8
SRSF1-204ENST00000581979 EIF5AL1Q6IS14 154 aaKnown RBP10.04□□□□□ -0.8
SRSF1-204ENST00000581979 HAPLN4Q86UW8 402 aa10.04□□□□□ -0.8
SRSF1-204ENST00000581979 MMD2Q8IY49 270 aa10.04□□□□□ -0.8
SRSF1-204ENST00000581979 OR10P1Q8NGE3 313 aa10.04□□□□□ -0.8
SRSF1-204ENST00000581979 EAF1Q96JC9 268 aaPredicted RBP10.04□□□□□ -0.8
SRSF1-204ENST00000581979 FBXL15Q9H469 300 aa10.04□□□□□ -0.8
SRSF1-204ENST00000581979 KIAA1456Q9P272 454 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms