RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 ASB13Q8WXK3 278 aa8.18□□□□□ -1.1
CCDC47-203ENST00000580986 CLCC1Q96S66 551 aa8.18□□□□□ -1.1
CCDC47-203ENST00000580986 PDCD10Q9BUL8 212 aa8.18□□□□□ -1.1
CCDC47-203ENST00000580986 PARP11Q9NR21 331 aa8.18□□□□□ -1.1
CCDC47-203ENST00000580986 HSPB7Q9UBY9 170 aa8.18□□□□□ -1.1
CCDC47-203ENST00000580986 KLK9Q9UKQ9 250 aa8.18□□□□□ -1.1
CCDC47-203ENST00000580986 FBXO7Q9Y3I1 522 aa8.18□□□□□ -1.1
CCDC47-203ENST00000580986 OR51B2Q9Y5P1 312 aa8.18□□□□□ -1.1
CCDC47-203ENST00000580986 ALG5Q9Y673 324 aa8.18□□□□□ -1.1
CCDC47-203ENST00000580986 ATRQ13535 2644 aa8.17□□□□□ -1.1
CCDC47-203ENST00000580986 TRAV41A0A0B4J266 112 aa8.17□□□□□ -1.1
CCDC47-203ENST00000580986 A0A1B0GW64 132 aa8.17□□□□□ -1.1
CCDC47-203ENST00000580986 IGLC7A0M8Q6 106 aa8.17□□□□□ -1.1
CCDC47-203ENST00000580986 CGB1A6NKQ9 187 aa8.17□□□□□ -1.1
CCDC47-203ENST00000580986 ST8SIA3O43173 380 aa8.17□□□□□ -1.1
CCDC47-203ENST00000580986 RBMXL2O75526 392 aaKnown RBP8.17□□□□□ -1.1
CCDC47-203ENST00000580986 ADAP1O75689 374 aa8.17□□□□□ -1.1
CCDC47-203ENST00000580986 IGHG4P01861 327 aa8.17□□□□□ -1.1
CCDC47-203ENST00000580986 CRYGCP07315 174 aa8.17□□□□□ -1.1
CCDC47-203ENST00000580986 TRAPPC2P0DI81 140 aa8.17□□□□□ -1.1
CCDC47-203ENST00000580986 TRAPPC2BP0DI82 140 aa8.17□□□□□ -1.1
CCDC47-203ENST00000580986 GNB1P62873 340 aa8.17□□□□□ -1.1
CCDC47-203ENST00000580986 SLC35B1P78383 322 aa8.17□□□□□ -1.1
CCDC47-203ENST00000580986 TNFRSF9Q07011 255 aa8.17□□□□□ -1.1
CCDC47-203ENST00000580986 ARSJQ5FYB0 599 aaPredicted RBP8.17□□□□□ -1.1
CCDC47-203ENST00000580986 C9orf152Q5JTZ5 239 aa8.17□□□□□ -1.1
CCDC47-203ENST00000580986 TTC9CQ8N5M4 171 aa8.17□□□□□ -1.1
CCDC47-203ENST00000580986 ZNF114Q8NC26 417 aa8.17□□□□□ -1.1
CCDC47-203ENST00000580986 OR4D5Q8NGN0 318 aa8.17□□□□□ -1.1
CCDC47-203ENST00000580986 WFDC12Q8WWY7 111 aa8.17□□□□□ -1.1
CCDC47-203ENST00000580986 NSG2Q9Y328 171 aa8.17□□□□□ -1.1
CCDC47-203ENST00000580986 RNF114Q9Y508 228 aa8.17□□□□□ -1.1
CCDC47-203ENST00000580986 PLXNB1O43157 2135 aa8.17□□□□□ -1.1
CCDC47-203ENST00000580986 MSGN1A6NI15 193 aa8.16□□□□□ -1.1
CCDC47-203ENST00000580986 SH2D7A6NKC9 451 aaPredicted RBP8.16□□□□□ -1.1
CCDC47-203ENST00000580986 LINC01548A6NM66 108 aa8.16□□□□□ -1.1
CCDC47-203ENST00000580986 E7EUB6 86 aa8.16□□□□□ -1.1
CCDC47-203ENST00000580986 IFNA17P01571 189 aa8.16□□□□□ -1.1
CCDC47-203ENST00000580986 IGLV1-40P01703 118 aa8.16□□□□□ -1.1
CCDC47-203ENST00000580986 ELANEP08246 267 aa8.16□□□□□ -1.1
CCDC47-203ENST00000580986 CTRB1P17538 263 aa8.16□□□□□ -1.1
CCDC47-203ENST00000580986 ATP5IP56385 69 aaPredicted RBP8.16□□□□□ -1.1
CCDC47-203ENST00000580986 CYCSP99999 105 aaKnown RBP8.16□□□□□ -1.1
CCDC47-203ENST00000580986 ID3Q02535 119 aa8.16□□□□□ -1.1
CCDC47-203ENST00000580986 SRSF4Q08170 494 aaKnown RBP8.16□□□□□ -1.1
CCDC47-203ENST00000580986 IZUMO4Q1ZYL8 232 aa8.16□□□□□ -1.1
CCDC47-203ENST00000580986 C10orf55Q5SWW7 151 aa8.16□□□□□ -1.1
CCDC47-203ENST00000580986 ASPHD1Q5U4P2 390 aa8.16□□□□□ -1.1
CCDC47-203ENST00000580986 CTRB2Q6GPI1 263 aa8.16□□□□□ -1.1
CCDC47-203ENST00000580986 TET2Q6N021 2002 aaPredicted RBP8.16□□□□□ -1.1
CCDC47-203ENST00000580986 GSG1LQ6UXU4 331 aa8.16□□□□□ -1.1
CCDC47-203ENST00000580986 LFNGQ8NES3 379 aa8.16□□□□□ -1.1
CCDC47-203ENST00000580986 OR1L6Q8NGR2 347 aa8.16□□□□□ -1.1
CCDC47-203ENST00000580986 GRPEL2Q8TAA5 225 aa8.16□□□□□ -1.1
CCDC47-203ENST00000580986 FAM110DQ8TAY7 271 aaPredicted RBP8.16□□□□□ -1.1
CCDC47-203ENST00000580986 C2orf50Q96LR7 162 aa8.16□□□□□ -1.1
CCDC47-203ENST00000580986 FYTTD1Q96QD9 318 aaKnown RBP8.16□□□□□ -1.1
CCDC47-203ENST00000580986 C19orf24Q9BVV8 132 aa8.16□□□□□ -1.1
CCDC47-203ENST00000580986 SLA2Q9H6Q3 261 aa8.16□□□□□ -1.1
CCDC47-203ENST00000580986 PLEKHA3Q9HB20 300 aa8.16□□□□□ -1.1
CCDC47-203ENST00000580986 ZFP57Q9NU63 452 aa8.16□□□□□ -1.1
CCDC47-203ENST00000580986 FBN1P35555 2871 aaKnown RBP8.15□□□□□ -1.1
CCDC47-203ENST00000580986 PSMB11A5LHX3 300 aa8.15□□□□□ -1.1
CCDC47-203ENST00000580986 MPTX1A8MV57 137 aa8.15□□□□□ -1.1
CCDC47-203ENST00000580986 CYB5BO43169 146 aa8.15□□□□□ -1.1
CCDC47-203ENST00000580986 SSNA1O43805 119 aa8.15□□□□□ -1.1
CCDC47-203ENST00000580986 MED6O75586 246 aa8.15□□□□□ -1.1
CCDC47-203ENST00000580986 MDKP21741 143 aaPredicted RBP8.15□□□□□ -1.1
CCDC47-203ENST00000580986 PSMB8P28062 276 aa8.15□□□□□ -1.1
CCDC47-203ENST00000580986 NKX2-1P43699 371 aaPredicted RBP8.15□□□□□ -1.1
CCDC47-203ENST00000580986 RRAS2P62070 204 aaPredicted RBP8.15□□□□□ -1.1
CCDC47-203ENST00000580986 SRSF2Q01130 221 aaKnown RBP8.15□□□□□ -1.1
CCDC47-203ENST00000580986 IL15RAQ13261 267 aa8.15□□□□□ -1.1
CCDC47-203ENST00000580986 FOXE3Q13461 319 aa8.15□□□□□ -1.1
CCDC47-203ENST00000580986 IAH1Q2TAA2 248 aaPredicted RBP8.15□□□□□ -1.1
CCDC47-203ENST00000580986 BSXQ3C1V8 233 aa8.15□□□□□ -1.1
CCDC47-203ENST00000580986 TMEM95Q3KNT9 176 aa8.15□□□□□ -1.1
CCDC47-203ENST00000580986 AWAT1Q58HT5 328 aa8.15□□□□□ -1.1
CCDC47-203ENST00000580986 PVRIGQ6DKI7 326 aa8.15□□□□□ -1.1
CCDC47-203ENST00000580986 TEX38Q6PEX7 206 aa8.15□□□□□ -1.1
CCDC47-203ENST00000580986 UNQ5815/PRO19632Q6UWF5 114 aa8.15□□□□□ -1.1
CCDC47-203ENST00000580986 Q6ZNX1 250 aa8.15□□□□□ -1.1
CCDC47-203ENST00000580986 ZBTB8BQ8NAP8 495 aaPredicted RBP8.15□□□□□ -1.1
CCDC47-203ENST00000580986 OR1S1Q8NH92 325 aa8.15□□□□□ -1.1
CCDC47-203ENST00000580986 MYOZ3Q8TDC0 251 aa8.15□□□□□ -1.1
CCDC47-203ENST00000580986 ABHD5Q8WTS1 349 aa8.15□□□□□ -1.1
CCDC47-203ENST00000580986 OR10C1Q96KK4 312 aa8.15□□□□□ -1.1
CCDC47-203ENST00000580986 NOL4LQ96MY1 436 aaPredicted RBP8.15□□□□□ -1.1
CCDC47-203ENST00000580986 CIB3Q96Q77 187 aaPredicted RBP8.15□□□□□ -1.1
CCDC47-203ENST00000580986 FAM103A1Q9BTL3 118 aaKnown RBP8.15□□□□□ -1.1
CCDC47-203ENST00000580986 NMES1Q9C002 83 aa8.15□□□□□ -1.1
CCDC47-203ENST00000580986 TRBV9A0A0B4J1U6 114 aa8.14□□□□□ -1.11
CCDC47-203ENST00000580986 G3V318 75 aa8.14□□□□□ -1.11
CCDC47-203ENST00000580986 FBXO24O75426 580 aa8.14□□□□□ -1.11
CCDC47-203ENST00000580986 HIST1H1BP16401 226 aaKnown RBP8.14□□□□□ -1.11
CCDC47-203ENST00000580986 PSMB6P28072 239 aa8.14□□□□□ -1.11
CCDC47-203ENST00000580986 ERHP84090 104 aaKnown RBP8.14□□□□□ -1.11
CCDC47-203ENST00000580986 WT1-ASQ06250 92 aa8.14□□□□□ -1.11
CCDC47-203ENST00000580986 ECSCRQ19T08 205 aa8.14□□□□□ -1.11
CCDC47-203ENST00000580986 CENPVQ7Z7K6 275 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms