RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 IL6RP08887 468 aaPredicted RBP10.17□□□□□ -0.78
TRAF4-214ENST00000580073 MYOD1P15172 320 aa10.17□□□□□ -0.78
TRAF4-214ENST00000580073 F2RP25116 425 aa10.17□□□□□ -0.78
TRAF4-214ENST00000580073 LPAR6P43657 344 aa10.17□□□□□ -0.78
TRAF4-214ENST00000580073 PIGPP57054 158 aa10.17□□□□□ -0.78
TRAF4-214ENST00000580073 CD81P60033 236 aa10.17□□□□□ -0.78
TRAF4-214ENST00000580073 UBE2KP61086 200 aa10.17□□□□□ -0.78
TRAF4-214ENST00000580073 RND3P61587 244 aa10.17□□□□□ -0.78
TRAF4-214ENST00000580073 IFITM3Q01628 133 aa10.17□□□□□ -0.78
TRAF4-214ENST00000580073 ZNF57Q68EA5 555 aaPredicted RBP10.17□□□□□ -0.78
TRAF4-214ENST00000580073 LPCAT3Q6P1A2 487 aa10.17□□□□□ -0.78
TRAF4-214ENST00000580073 ADAMTSL5Q6ZMM2 481 aa10.17□□□□□ -0.78
TRAF4-214ENST00000580073 SLC25A42Q86VD7 318 aa10.17□□□□□ -0.78
TRAF4-214ENST00000580073 PUSL1Q8N0Z8 303 aaKnown RBP10.17□□□□□ -0.78
TRAF4-214ENST00000580073 TEX45Q8NA69 505 aa10.17□□□□□ -0.78
TRAF4-214ENST00000580073 OR4S2Q8NH73 311 aa10.17□□□□□ -0.78
TRAF4-214ENST00000580073 OSR1Q8TAX0 266 aaPredicted RBP10.17□□□□□ -0.78
TRAF4-214ENST00000580073 TP53RKQ96S44 253 aa10.17□□□□□ -0.78
TRAF4-214ENST00000580073 RBFOX2O43251 390 aaKnown RBP eCLIP10.16□□□□□ -0.78
TRAF4-214ENST00000580073 RPA2P15927 270 aa10.16□□□□□ -0.78
TRAF4-214ENST00000580073 KIR2DS2P43631 304 aa10.16□□□□□ -0.78
TRAF4-214ENST00000580073 CCR6P51684 374 aa10.16□□□□□ -0.78
TRAF4-214ENST00000580073 EXOSC2Q13868 293 aaKnown RBP10.16□□□□□ -0.78
TRAF4-214ENST00000580073 TNXAQ16473 311 aa10.16□□□□□ -0.78
TRAF4-214ENST00000580073 SP6Q3SY56 376 aa10.16□□□□□ -0.78
TRAF4-214ENST00000580073 SSX9Q7RTT3 188 aa10.16□□□□□ -0.78
TRAF4-214ENST00000580073 CMTM1Q8IZ96 169 aa10.16□□□□□ -0.78
TRAF4-214ENST00000580073 ZNF486Q96H40 463 aaPredicted RBP10.16□□□□□ -0.78
TRAF4-214ENST00000580073 SPIN2AQ99865 258 aa10.16□□□□□ -0.78
TRAF4-214ENST00000580073 PRRT1Q99946 306 aa10.16□□□□□ -0.78
TRAF4-214ENST00000580073 SPIN2BQ9BPZ2 258 aa10.16□□□□□ -0.78
TRAF4-214ENST00000580073 A0A1B0GW64 132 aa10.15□□□□□ -0.78
TRAF4-214ENST00000580073 E7EUB6 86 aa10.15□□□□□ -0.78
TRAF4-214ENST00000580073 HPRT1P00492 218 aa10.15□□□□□ -0.78
TRAF4-214ENST00000580073 CSN3P07498 182 aa10.15□□□□□ -0.78
TRAF4-214ENST00000580073 AP3S2P59780 193 aa10.15□□□□□ -0.78
TRAF4-214ENST00000580073 CATR1Q13166 79 aa10.15□□□□□ -0.78
TRAF4-214ENST00000580073 SURF2Q15527 256 aaPredicted RBP10.15□□□□□ -0.78
TRAF4-214ENST00000580073 PRSS8Q16651 343 aa10.15□□□□□ -0.78
TRAF4-214ENST00000580073 C10orf55Q5SWW7 151 aa10.15□□□□□ -0.78
TRAF4-214ENST00000580073 TRIQKQ629K1 86 aa10.15□□□□□ -0.78
TRAF4-214ENST00000580073 IL34Q6ZMJ4 242 aa10.15□□□□□ -0.78
TRAF4-214ENST00000580073 ZFAND1Q8TCF1 268 aa10.15□□□□□ -0.78
TRAF4-214ENST00000580073 SRSF12Q8WXF0 261 aaKnown RBP10.15□□□□□ -0.78
TRAF4-214ENST00000580073 BORCS5Q969J3 196 aa10.15□□□□□ -0.78
TRAF4-214ENST00000580073 NEURL2Q9BR09 285 aa10.15□□□□□ -0.78
TRAF4-214ENST00000580073 ZNF430Q9H8G1 570 aaPredicted RBP10.15□□□□□ -0.78
TRAF4-214ENST00000580073 CSMD3Q7Z407 3707 aa10.14□□□□□ -0.79
TRAF4-214ENST00000580073 CGB1A6NKQ9 187 aa10.14□□□□□ -0.79
TRAF4-214ENST00000580073 SUPT4H1P63272 117 aaKnown RBP10.14□□□□□ -0.79
TRAF4-214ENST00000580073 RHOGP84095 191 aa10.14□□□□□ -0.79
TRAF4-214ENST00000580073 ATP5G2Q06055 141 aa10.14□□□□□ -0.79
TRAF4-214ENST00000580073 POU2AF1Q16633 256 aa10.14□□□□□ -0.79
TRAF4-214ENST00000580073 OR4A47Q6IF82 309 aa10.14□□□□□ -0.79
TRAF4-214ENST00000580073 MMD2Q8IY49 270 aa10.14□□□□□ -0.79
TRAF4-214ENST00000580073 NECAP1Q8NC96 275 aa10.14□□□□□ -0.79
TRAF4-214ENST00000580073 LHFPL5Q8TAF8 219 aa10.14□□□□□ -0.79
TRAF4-214ENST00000580073 TMEM167AQ8TBQ9 72 aa10.14□□□□□ -0.79
TRAF4-214ENST00000580073 S100ZQ8WXG8 99 aa10.14□□□□□ -0.79
TRAF4-214ENST00000580073 PLEKHA2Q9HB19 425 aa10.14□□□□□ -0.79
TRAF4-214ENST00000580073 PLEKHA3Q9HB20 300 aa10.14□□□□□ -0.79
TRAF4-214ENST00000580073 TECRQ9NZ01 308 aaKnown RBP10.14□□□□□ -0.79
TRAF4-214ENST00000580073 PRR13Q9NZ81 148 aa10.14□□□□□ -0.79
TRAF4-214ENST00000580073 SCP2D1Q9UJQ7 156 aa10.14□□□□□ -0.79
TRAF4-214ENST00000580073 TBC1D24Q9ULP9 559 aa10.14□□□□□ -0.79
TRAF4-214ENST00000580073 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.13□□□□□ -0.79
TRAF4-214ENST00000580073 C3orf85A0A1B0GTC6 90 aa10.13□□□□□ -0.79
TRAF4-214ENST00000580073 MSGN1A6NI15 193 aa10.13□□□□□ -0.79
TRAF4-214ENST00000580073 CRYM-AS1A6NIL9 109 aa10.13□□□□□ -0.79
TRAF4-214ENST00000580073 KBTBD11O94819 623 aa10.13□□□□□ -0.79
TRAF4-214ENST00000580073 DHFRP00374 187 aa10.13□□□□□ -0.79
TRAF4-214ENST00000580073 G6PCP35575 357 aa10.13□□□□□ -0.79
TRAF4-214ENST00000580073 TAS2R31P59538 309 aa10.13□□□□□ -0.79
TRAF4-214ENST00000580073 IZUMO4Q1ZYL8 232 aa10.13□□□□□ -0.79
TRAF4-214ENST00000580073 SLC16A13Q7RTY0 426 aa10.13□□□□□ -0.79
TRAF4-214ENST00000580073 VSTM2AQ8TAG5 236 aa10.13□□□□□ -0.79
TRAF4-214ENST00000580073 GLYATL2Q8WU03 294 aa10.13□□□□□ -0.79
TRAF4-214ENST00000580073 DEDD2Q8WXF8 326 aa10.13□□□□□ -0.79
TRAF4-214ENST00000580073 SEC22AQ96IW7 307 aa10.13□□□□□ -0.79
TRAF4-214ENST00000580073 OR2A7Q96R45 310 aa10.13□□□□□ -0.79
TRAF4-214ENST00000580073 CCDC32Q9BV29 185 aa10.13□□□□□ -0.79
TRAF4-214ENST00000580073 HIPK2Q9H2X6 1198 aa10.13□□□□□ -0.79
TRAF4-214ENST00000580073 FLVCR2Q9UPI3 526 aa10.13□□□□□ -0.79
TRAF4-214ENST00000580073 BIRC6Q9NR09 4857 aa10.13□□□□□ -0.79
TRAF4-214ENST00000580073 A0A0G2JRQ6 117 aa10.12□□□□□ -0.79
TRAF4-214ENST00000580073 DBX1A6NMT0 343 aa10.12□□□□□ -0.79
TRAF4-214ENST00000580073 UPK2O00526 184 aa10.12□□□□□ -0.79
TRAF4-214ENST00000580073 HRASP01112 189 aa10.12□□□□□ -0.79
TRAF4-214ENST00000580073 KRASP01116 189 aa10.12□□□□□ -0.79
TRAF4-214ENST00000580073 IGKV1-5P01602 117 aa10.12□□□□□ -0.79
TRAF4-214ENST00000580073 TRBV12-3P01733 135 aa10.12□□□□□ -0.79
TRAF4-214ENST00000580073 OR5AC1P0C628 307 aa10.12□□□□□ -0.79
TRAF4-214ENST00000580073 P0C879 139 aa10.12□□□□□ -0.79
TRAF4-214ENST00000580073 NQO2P16083 231 aa10.12□□□□□ -0.79
TRAF4-214ENST00000580073 FAUP35544 74 aaKnown RBP10.12□□□□□ -0.79
TRAF4-214ENST00000580073 ZNF846Q147U1 533 aa10.12□□□□□ -0.79
TRAF4-214ENST00000580073 CD300LFQ8TDQ1 290 aa10.12□□□□□ -0.79
TRAF4-214ENST00000580073 NAA60Q9H7X0 242 aa10.12□□□□□ -0.79
TRAF4-214ENST00000580073 SRD5A3Q9H8P0 318 aa10.12□□□□□ -0.79
TRAF4-214ENST00000580073 FAM212BQ9NTI7 297 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms