RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 CLCF1Q9UBD9 225 aa5.1□□□□□ -1.59
COPS3-216ENST00000579716 OR2W1Q9Y3N9 320 aa5.1□□□□□ -1.59
COPS3-216ENST00000579716 ZSWIM8A7E2V4 1837 aa5.09□□□□□ -1.59
COPS3-216ENST00000579716 ITGB4P16144 1822 aa5.09□□□□□ -1.59
COPS3-216ENST00000579716 DNMT1P26358 1616 aaKnown RBP5.09□□□□□ -1.59
COPS3-216ENST00000579716 ARHGAP5Q13017 1502 aa5.09□□□□□ -1.59
COPS3-216ENST00000579716 TEX48A0A1B0GUV7 120 aa5.09□□□□□ -1.59
COPS3-216ENST00000579716 IGLC7A0M8Q6 106 aa5.09□□□□□ -1.59
COPS3-216ENST00000579716 IRGMA1A4Y4 181 aa5.09□□□□□ -1.59
COPS3-216ENST00000579716 GABARAPO95166 117 aa5.09□□□□□ -1.59
COPS3-216ENST00000579716 NAPSAO96009 420 aa5.09□□□□□ -1.59
COPS3-216ENST00000579716 CYB5AP00167 134 aa5.09□□□□□ -1.59
COPS3-216ENST00000579716 TRGC2P03986 189 aa5.09□□□□□ -1.59
COPS3-216ENST00000579716 SHBGP04278 402 aa5.09□□□□□ -1.59
COPS3-216ENST00000579716 FCGR3AP08637 254 aa5.09□□□□□ -1.59
COPS3-216ENST00000579716 HLA-DOBP13765 273 aa5.09□□□□□ -1.59
COPS3-216ENST00000579716 ABCA11PQ4W5N1 156 aa5.09□□□□□ -1.59
COPS3-216ENST00000579716 C9orf153Q5TBE3 101 aa5.09□□□□□ -1.59
COPS3-216ENST00000579716 HEPN1Q6WQI6 88 aa5.09□□□□□ -1.59
COPS3-216ENST00000579716 Q6ZS49 121 aa5.09□□□□□ -1.59
COPS3-216ENST00000579716 FAM57BQ71RH2 274 aa5.09□□□□□ -1.59
COPS3-216ENST00000579716 OR5D16Q8NGK9 328 aa5.09□□□□□ -1.59
COPS3-216ENST00000579716 C2orf15Q8WU43 125 aaKnown RBP5.09□□□□□ -1.59
COPS3-216ENST00000579716 OR2A5Q96R48 311 aa5.09□□□□□ -1.59
COPS3-216ENST00000579716 TBL1YQ9BQ87 522 aa5.09□□□□□ -1.59
COPS3-216ENST00000579716 TSSK6Q9BXA6 273 aa5.09□□□□□ -1.59
COPS3-216ENST00000579716 LINC00527Q9UJ94 153 aa5.09□□□□□ -1.59
COPS3-216ENST00000579716 LINC00312Q9Y6C7 94 aa5.09□□□□□ -1.59
COPS3-216ENST00000579716 CHCHD2Q9Y6H1 151 aaPredicted RBP5.09□□□□□ -1.59
COPS3-216ENST00000579716 V9GY05 133 aa5.09□□□□□ -1.59
COPS3-216ENST00000579716 ATG2AQ2TAZ0 1938 aa5.09□□□□□ -1.6
COPS3-216ENST00000579716 BAZ2AQ9UIF9 1905 aaKnown RBP5.09□□□□□ -1.6
COPS3-216ENST00000579716 ADGBQ8N7X0 1667 aa5.08□□□□□ -1.6
COPS3-216ENST00000579716 TOPBP1Q92547 1522 aa5.08□□□□□ -1.6
COPS3-216ENST00000579716 DISP1Q96F81 1524 aa5.08□□□□□ -1.6
COPS3-216ENST00000579716 BLMP54132 1417 aaPredicted RBP5.08□□□□□ -1.6
COPS3-216ENST00000579716 TTC3P53804 2025 aa5.08□□□□□ -1.6
COPS3-216ENST00000579716 DOCK3Q8IZD9 2030 aa5.08□□□□□ -1.6
COPS3-216ENST00000579716 VWA8A3KMH1 1905 aa5.08□□□□□ -1.6
COPS3-216ENST00000579716 IGKV1D-13A0A0B4J2D9 117 aa5.08□□□□□ -1.6
COPS3-216ENST00000579716 TAX1BP3O14907 124 aa5.08□□□□□ -1.6
COPS3-216ENST00000579716 ATP6V0E1O15342 81 aa5.08□□□□□ -1.6
COPS3-216ENST00000579716 HIST1H2BKO60814 126 aa5.08□□□□□ -1.6
COPS3-216ENST00000579716 SCRG1O75711 98 aa5.08□□□□□ -1.6
COPS3-216ENST00000579716 CFDP00746 253 aaPredicted RBP5.08□□□□□ -1.6
COPS3-216ENST00000579716 HRASP01112 189 aa5.08□□□□□ -1.6
COPS3-216ENST00000579716 HIST1H2BJP06899 126 aa5.08□□□□□ -1.6
COPS3-216ENST00000579716 IGKV1-13P0DP09 117 aa5.08□□□□□ -1.6
COPS3-216ENST00000579716 HIST1H2BOP23527 126 aa5.08□□□□□ -1.6
COPS3-216ENST00000579716 HIST1H2BBP33778 126 aa5.08□□□□□ -1.6
COPS3-216ENST00000579716 NDUFA8P51970 172 aa5.08□□□□□ -1.6
COPS3-216ENST00000579716 HIST1H2BDP58876 126 aa5.08□□□□□ -1.6
COPS3-216ENST00000579716 HIST1H2BCP62807 126 aa5.08□□□□□ -1.6
COPS3-216ENST00000579716 Q0VG73 95 aa5.08□□□□□ -1.6
COPS3-216ENST00000579716 HIST2H2BEQ16778 126 aa5.08□□□□□ -1.6
COPS3-216ENST00000579716 LGALSLQ3ZCW2 172 aaPredicted RBP5.08□□□□□ -1.6
COPS3-216ENST00000579716 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.08□□□□□ -1.6
COPS3-216ENST00000579716 LINC00242Q5T6M2 205 aa5.08□□□□□ -1.6
COPS3-216ENST00000579716 FAM219BQ5XKK7 198 aa5.08□□□□□ -1.6
COPS3-216ENST00000579716 CLEC20AQ6ZU45 233 aa5.08□□□□□ -1.6
COPS3-216ENST00000579716 AAED1Q7RTV5 226 aa5.08□□□□□ -1.6
COPS3-216ENST00000579716 KTN1-AS1Q86SY8 53 aa5.08□□□□□ -1.6
COPS3-216ENST00000579716 ATOH7Q8N100 152 aa5.08□□□□□ -1.6
COPS3-216ENST00000579716 C3orf22Q8N5N4 141 aa5.08□□□□□ -1.6
COPS3-216ENST00000579716 OR4X2Q8NGF9 303 aa5.08□□□□□ -1.6
COPS3-216ENST00000579716 OR2T10Q8NGZ9 312 aa5.08□□□□□ -1.6
COPS3-216ENST00000579716 HIST1H2BHQ93079 126 aa5.08□□□□□ -1.6
COPS3-216ENST00000579716 ZNF689Q96CS4 500 aaPredicted RBP5.08□□□□□ -1.6
COPS3-216ENST00000579716 LINC00526Q96FQ7 95 aa5.08□□□□□ -1.6
COPS3-216ENST00000579716 DPH3Q96FX2 82 aa5.08□□□□□ -1.6
COPS3-216ENST00000579716 MCEEQ96PE7 176 aa5.08□□□□□ -1.6
COPS3-216ENST00000579716 HIST1H2BNQ99877 126 aa5.08□□□□□ -1.6
COPS3-216ENST00000579716 HIST1H2BMQ99879 126 aa5.08□□□□□ -1.6
COPS3-216ENST00000579716 OTORQ9NRC9 128 aa5.08□□□□□ -1.6
COPS3-216ENST00000579716 BRCA1P38398 1863 aaKnown RBP5.08□□□□□ -1.6
COPS3-216ENST00000579716 PLEKHH2Q8IVE3 1493 aa5.07□□□□□ -1.6
COPS3-216ENST00000579716 LTN1O94822 1766 aa5.07□□□□□ -1.6
COPS3-216ENST00000579716 DSPPQ9NZW4 1301 aa5.07□□□□□ -1.6
COPS3-216ENST00000579716 ARAP2Q8WZ64 1704 aa5.07□□□□□ -1.6
COPS3-216ENST00000579716 IGHV2-26A0A0B4J1V2 119 aa5.07□□□□□ -1.6
COPS3-216ENST00000579716 C3orf85A0A1B0GTC6 90 aa5.07□□□□□ -1.6
COPS3-216ENST00000579716 A8MWV9 139 aa5.07□□□□□ -1.6
COPS3-216ENST00000579716 F8W1H4 67 aa5.07□□□□□ -1.6
COPS3-216ENST00000579716 M0R1X1 148 aa5.07□□□□□ -1.6
COPS3-216ENST00000579716 CECR9P0C854 216 aa5.07□□□□□ -1.6
COPS3-216ENST00000579716 FCGR2CP31995 323 aa5.07□□□□□ -1.6
COPS3-216ENST00000579716 RPL22P35268 128 aaKnown RBP5.07□□□□□ -1.6
COPS3-216ENST00000579716 CDKN2AP42771 156 aaKnown RBP5.07□□□□□ -1.6
COPS3-216ENST00000579716 NMUP48645 174 aa5.07□□□□□ -1.6
COPS3-216ENST00000579716 CRYBA2P53672 197 aa5.07□□□□□ -1.6
COPS3-216ENST00000579716 MFAP2P55001 183 aa5.07□□□□□ -1.6
COPS3-216ENST00000579716 PROK1P58294 105 aa5.07□□□□□ -1.6
COPS3-216ENST00000579716 C1orf140Q5VVS0 124 aa5.07□□□□□ -1.6
COPS3-216ENST00000579716 OR2T2Q6IF00 324 aa5.07□□□□□ -1.6
COPS3-216ENST00000579716 C11orf71Q6IPW1 123 aa5.07□□□□□ -1.6
COPS3-216ENST00000579716 C22orf39Q6P5X5 142 aa5.07□□□□□ -1.6
COPS3-216ENST00000579716 Q6ZS92 163 aa5.07□□□□□ -1.6
COPS3-216ENST00000579716 SHISA6Q6ZSJ9 500 aa5.07□□□□□ -1.6
COPS3-216ENST00000579716 SLC22A24Q8N4F4 322 aa5.07□□□□□ -1.6
COPS3-216ENST00000579716 Q8N9P0 234 aaPredicted RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms