RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 NABP1Q96AH0 204 aa12.74□□□□□ -0.37
ITGB4-206ENST00000579662 STAG3L2P0CL84 134 aa12.74□□□□□ -0.37
ITGB4-206ENST00000579662 RNF224P0DH78 156 aa12.74□□□□□ -0.37
ITGB4-206ENST00000579662 IGFBP2P18065 325 aa12.74□□□□□ -0.37
ITGB4-206ENST00000579662 TMEM133Q9H2Q1 129 aa12.74□□□□□ -0.37
ITGB4-206ENST00000579662 PLXNA3P51805 1871 aa12.74□□□□□ -0.37
ITGB4-206ENST00000579662 TRAV24A0A0B4J272 114 aa12.74□□□□□ -0.37
ITGB4-206ENST00000579662 SAMD13Q5VXD3 122 aa12.74□□□□□ -0.37
ITGB4-206ENST00000579662 PAM16Q9Y3D7 125 aa12.74□□□□□ -0.37
ITGB4-206ENST00000579662 MSGN1A6NI15 193 aa12.73□□□□□ -0.37
ITGB4-206ENST00000579662 NBEAP1P0C6P0 100 aa12.73□□□□□ -0.37
ITGB4-206ENST00000579662 TBR1Q16650 682 aa12.73□□□□□ -0.37
ITGB4-206ENST00000579662 MORN2Q502X0 79 aa12.73□□□□□ -0.37
ITGB4-206ENST00000579662 OR1N2Q8NGR9 330 aa12.73□□□□□ -0.37
ITGB4-206ENST00000579662 NBR2O15453 112 aa12.73□□□□□ -0.37
ITGB4-206ENST00000579662 TEX45Q8NA69 505 aa12.73□□□□□ -0.37
ITGB4-206ENST00000579662 TNFRSF14Q92956 283 aa12.73□□□□□ -0.37
ITGB4-206ENST00000579662 TFF3Q07654 80 aa12.73□□□□□ -0.37
ITGB4-206ENST00000579662 C7orf69Q9H7B7 122 aa12.73□□□□□ -0.37
ITGB4-206ENST00000579662 HAX1O00165 279 aa12.73□□□□□ -0.37
ITGB4-206ENST00000579662 LEPROTL1O95214 131 aa12.73□□□□□ -0.37
ITGB4-206ENST00000579662 GAS1P54826 345 aa12.73□□□□□ -0.37
ITGB4-206ENST00000579662 C2orf83Q53S99 150 aa12.73□□□□□ -0.37
ITGB4-206ENST00000579662 GPR82Q96P67 336 aa12.73□□□□□ -0.37
ITGB4-206ENST00000579662 C15orf61A6NNL5 157 aa12.72□□□□□ -0.37
ITGB4-206ENST00000579662 NUDT3O95989 172 aa12.72□□□□□ -0.37
ITGB4-206ENST00000579662 PF4P02776 101 aa12.72□□□□□ -0.37
ITGB4-206ENST00000579662 SAA1P0DJI8 122 aaPredicted RBP12.72□□□□□ -0.37
ITGB4-206ENST00000579662 ZNF525Q8N782 197 aa12.72□□□□□ -0.37
ITGB4-206ENST00000579662 FOXA2Q9Y261 457 aaPredicted RBP12.72□□□□□ -0.37
ITGB4-206ENST00000579662 FBLL1A6NHQ2 334 aaKnown RBP12.72□□□□□ -0.37
ITGB4-206ENST00000579662 ZNF319Q9P2F9 582 aa12.72□□□□□ -0.37
ITGB4-206ENST00000579662 OR4C46A6NHA9 309 aa12.72□□□□□ -0.37
ITGB4-206ENST00000579662 H3BTX0 84 aa12.72□□□□□ -0.37
ITGB4-206ENST00000579662 IGHV3-48P01763 117 aa12.72□□□□□ -0.37
ITGB4-206ENST00000579662 BTCP35070 178 aa12.72□□□□□ -0.37
ITGB4-206ENST00000579662 HIST1H1AQ02539 215 aaPredicted RBP12.72□□□□□ -0.37
ITGB4-206ENST00000579662 FAM159AQ6UWV7 190 aa12.72□□□□□ -0.37
ITGB4-206ENST00000579662 FMC1Q96HJ9 113 aa12.72□□□□□ -0.37
ITGB4-206ENST00000579662 MESP1Q9BRJ9 268 aa12.72□□□□□ -0.37
ITGB4-206ENST00000579662 SMAD7O15105 426 aaKnown RBP12.72□□□□□ -0.37
ITGB4-206ENST00000579662 RPLP1P05386 114 aaKnown RBP12.72□□□□□ -0.37
ITGB4-206ENST00000579662 HBBP68871 147 aa12.72□□□□□ -0.37
ITGB4-206ENST00000579662 ICAM4Q14773 271 aa12.72□□□□□ -0.37
ITGB4-206ENST00000579662 CARHSP1Q9Y2V2 147 aaKnown RBP12.71□□□□□ -0.37
ITGB4-206ENST00000579662 IGHV3OR16-12A0A075B7B8 117 aa12.71□□□□□ -0.37
ITGB4-206ENST00000579662 TMEM238LA0A1B0GVL6 79 aa12.71□□□□□ -0.37
ITGB4-206ENST00000579662 A6NJY4 79 aa12.71□□□□□ -0.37
ITGB4-206ENST00000579662 NMUP48645 174 aa12.71□□□□□ -0.37
ITGB4-206ENST00000579662 HERPUD1Q15011 391 aa12.71□□□□□ -0.37
ITGB4-206ENST00000579662 PAQR4Q8N4S7 273 aaPredicted RBP12.71□□□□□ -0.37
ITGB4-206ENST00000579662 MDS2Q8NDY4 140 aa12.71□□□□□ -0.37
ITGB4-206ENST00000579662 RNF222A6NCQ9 220 aa12.71□□□□□ -0.37
ITGB4-206ENST00000579662 FOXI3A8MTJ6 420 aaPredicted RBP12.71□□□□□ -0.37
ITGB4-206ENST00000579662 CCL3L1P16619 93 aa12.71□□□□□ -0.37
ITGB4-206ENST00000579662 CDKN1AP38936 164 aa12.71□□□□□ -0.37
ITGB4-206ENST00000579662 OR4X2Q8NGF9 303 aa12.71□□□□□ -0.37
ITGB4-206ENST00000579662 OR10AG1Q8NH19 301 aa12.71□□□□□ -0.37
ITGB4-206ENST00000579662 FGFBP3Q8TAT2 258 aa12.71□□□□□ -0.37
ITGB4-206ENST00000579662 SIGLEC5O15389 551 aa12.71□□□□□ -0.38
ITGB4-206ENST00000579662 IGHV1-46P01743 117 aa12.71□□□□□ -0.38
ITGB4-206ENST00000579662 HLA-DRB1P01911 266 aa12.71□□□□□ -0.38
ITGB4-206ENST00000579662 Q0VFX4 171 aa12.71□□□□□ -0.38
ITGB4-206ENST00000579662 ZNF324BQ6AW86 544 aaPredicted RBP12.71□□□□□ -0.38
ITGB4-206ENST00000579662 TMEM144Q7Z5S9 345 aa12.71□□□□□ -0.38
ITGB4-206ENST00000579662 IGKV1D-13A0A0B4J2D9 117 aa12.7□□□□□ -0.38
ITGB4-206ENST00000579662 IGKV1-13P0DP09 117 aa12.7□□□□□ -0.38
ITGB4-206ENST00000579662 SRIP30626 198 aa12.7□□□□□ -0.38
ITGB4-206ENST00000579662 BMPERQ8N8U9 685 aa12.7□□□□□ -0.38
ITGB4-206ENST00000579662 OR52E5Q8NH55 327 aa12.7□□□□□ -0.38
ITGB4-206ENST00000579662 ZNF502Q8TBZ5 544 aa12.7□□□□□ -0.38
ITGB4-206ENST00000579662 TRAV14DV4A0A0A6YYC5 116 aa12.7□□□□□ -0.38
ITGB4-206ENST00000579662 PEX7O00628 323 aa12.7□□□□□ -0.38
ITGB4-206ENST00000579662 NUTF2P61970 127 aaKnown RBP12.7□□□□□ -0.38
ITGB4-206ENST00000579662 MIEN1Q9BRT3 115 aa12.7□□□□□ -0.38
ITGB4-206ENST00000579662 CIDEAO60543 219 aa12.7□□□□□ -0.38
ITGB4-206ENST00000579662 FAM209BQ5JX69 171 aa12.7□□□□□ -0.38
ITGB4-206ENST00000579662 WNT10AQ9GZT5 417 aa12.7□□□□□ -0.38
ITGB4-206ENST00000579662 ARID1AO14497 2285 aa12.7□□□□□ -0.38
ITGB4-206ENST00000579662 A1L4Q6 167 aa12.7□□□□□ -0.38
ITGB4-206ENST00000579662 GFI1Q99684 422 aa12.7□□□□□ -0.38
ITGB4-206ENST00000579662 SOX21Q9Y651 276 aaPredicted RBP12.7□□□□□ -0.38
ITGB4-206ENST00000579662 CGAP01215 116 aa12.7□□□□□ -0.38
ITGB4-206ENST00000579662 CRXO43186 299 aaPredicted RBP12.69□□□□□ -0.38
ITGB4-206ENST00000579662 ZNF324O75467 553 aaPredicted RBP12.69□□□□□ -0.38
ITGB4-206ENST00000579662 PVRIGQ6DKI7 326 aa12.69□□□□□ -0.38
ITGB4-206ENST00000579662 TMEM70Q9BUB7 260 aa12.69□□□□□ -0.38
ITGB4-206ENST00000579662 EIF3GO75821 320 aaKnown RBP eCLIP12.69□□□□□ -0.38
ITGB4-206ENST00000579662 A0A0A6YYD4 124 aa12.69□□□□□ -0.38
ITGB4-206ENST00000579662 FOLR2P14207 255 aa12.69□□□□□ -0.38
ITGB4-206ENST00000579662 DSCR9P59020 149 aa12.69□□□□□ -0.38
ITGB4-206ENST00000579662 FOXF2Q12947 444 aa12.69□□□□□ -0.38
ITGB4-206ENST00000579662 PAPPA-AS1Q5QFB9 102 aa12.69□□□□□ -0.38
ITGB4-206ENST00000579662 GPR183P32249 361 aa12.69□□□□□ -0.38
ITGB4-206ENST00000579662 TRIOBPQ9H2D6 2365 aa12.68□□□□□ -0.38
ITGB4-206ENST00000579662 TRAV9-1A0A075B6T8 112 aa12.68□□□□□ -0.38
ITGB4-206ENST00000579662 A0A1B0GW15 77 aa12.68□□□□□ -0.38
ITGB4-206ENST00000579662 KIR2DL4Q99706 377 aa12.68□□□□□ -0.38
ITGB4-206ENST00000579662 SRRM5B3KS81 715 aa12.68□□□□□ -0.38
ITGB4-206ENST00000579662 TGFAP01135 160 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms