RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 SLC35E3Q7Z769 313 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 FOXRED2Q8IWF2 684 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 SELENOHQ8IZQ5 122 aaKnown RBP2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 DUSP18Q8NEJ0 188 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 OR2T6Q8NHC8 308 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 SGMS2Q8NHU3 365 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 TMEM170AQ8WVE7 144 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 BORCS5Q969J3 196 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 R3HDM4Q96D70 268 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 TSNAXQ99598 290 aaKnown RBP2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 SLC25A21Q9BQT8 299 aaPredicted RBP2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 FAM103A1Q9BTL3 118 aaKnown RBP2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 KRTAP2-2Q9BYT5 123 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 ALX4Q9H161 411 aaPredicted RBP2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 C20orf85Q9H1P6 137 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 KLK15Q9H2R5 256 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 TMEM14BQ9NUH8 114 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 TMEM140Q9NV12 185 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 LINC00527Q9UJ94 153 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 SCP2D1Q9UJQ7 156 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 PRELID3BQ9Y3B1 194 aa2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 RBM7Q9Y580 266 aaKnown RBP2.94□□□□□ -1.94
SMARCE1-215ENST00000578995 TRBV9A0A0B4J1U6 114 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 TEX50A0A1B0GTY4 177 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 LINC00854A0A1B0GVQ3 168 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 C9orf170A2RU37 121 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 NCBP2LA6PVI3 153 aaKnown RBP2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 MPTX1A8MV57 137 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 INS-IGF2F8WCM5 200 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 AP4M1O00189 453 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 KCNAB3O43448 404 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 B3GALNT1O75752 331 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 OR2A4O95047 310 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 SFT2D2O95562 160 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 KRASP01116 189 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 CRYGCP07315 174 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 OR4E1P0C645 316 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 PGAM2P15259 253 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 AREGP15514 252 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 RPA2P15927 270 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 NQO2P16083 231 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 CTRB1P17538 263 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 HLA-GP17693 338 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 ANXA7P20073 488 aaKnown RBP2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 FAUP35544 74 aaKnown RBP2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 G6PCP35575 357 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 VDAC2P45880 294 aaPredicted RBP2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 UBE2MP61081 183 aaKnown RBP2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 WT1-ASQ06250 92 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 IL15RAQ13261 267 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 DHRS2Q13268 280 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 FHL3Q13643 280 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 FXYD3Q14802 87 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 C2orf68Q2NKX9 166 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 VMA21Q3ZAQ7 101 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 AKIRIN2Q53H80 203 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 TMEM128Q5BJH2 165 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 CTRB2Q6GPI1 263 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 SSX9Q7RTT3 188 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 ZNF329Q86UD4 541 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 ZNF429Q86V71 674 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 MMD2Q8IY49 270 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 CMTM1Q8IZ96 169 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 CENPSQ8N2Z9 138 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 SLC35G3Q8N808 338 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 CCDC71LQ8N9Z2 235 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 OR10W1Q8NGF6 305 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 OR52B4Q8NGK2 314 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 OR4A5Q8NH83 315 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 FAM110DQ8TAY7 271 aaPredicted RBP2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 ZFAND1Q8TCF1 268 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 CD300LFQ8TDQ1 290 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 SRSF12Q8WXF0 261 aaKnown RBP2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 ARPC1AQ92747 370 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 RBPMSQ93062 196 aaKnown RBP2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 IL22RA2Q969J5 263 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 LSM10Q969L4 123 aaKnown RBP2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 GPR146Q96CH1 333 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 OR2A7Q96R45 310 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 CLCC1Q96S66 551 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 CITED2Q99967 270 aaPredicted RBP2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 MARVELD1Q9BSK0 173 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 C11orf1Q9H5F2 150 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 BEX1Q9HBH7 125 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 PALMDQ9NP74 551 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 NDUFA4L2Q9NRX3 87 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 MCUBQ9NWR8 336 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 FOXA2Q9Y261 457 aaPredicted RBP2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 NSG2Q9Y328 171 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 NOTCH3Q9UM47 2321 aa2.93□□□□□ -1.94
SMARCE1-215ENST00000578995 SORL1Q92673 2214 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 IGLV11-55A0A075B6I3 123 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 TRAV41A0A0B4J266 112 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 A0A0B4J2A0 478 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 DUXBA0A1W2PPF3 345 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 C7orf66A4D0T2 115 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 PSMB11A5LHX3 300 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 HMX3A6NHT5 357 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 MSGN1A6NI15 193 aa2.92□□□□□ -1.94
SMARCE1-215ENST00000578995 NPIPB5A8MRT5 1133 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms