RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 UXS1Q8NBZ7 420 aa11.96□□□□□ -0.49
CRLF3-203ENST00000578692 OR1L8Q8NGR8 309 aa11.96□□□□□ -0.49
CRLF3-203ENST00000578692 GPX8Q8TED1 209 aa11.96□□□□□ -0.49
CRLF3-203ENST00000578692 FCAMRQ8WWV6 532 aa11.96□□□□□ -0.49
CRLF3-203ENST00000578692 CACNG8Q8WXS5 425 aa11.96□□□□□ -0.49
CRLF3-203ENST00000578692 WDR89Q96FK6 387 aaPredicted RBP11.96□□□□□ -0.49
CRLF3-203ENST00000578692 CMTM3Q96MX0 182 aa11.96□□□□□ -0.49
CRLF3-203ENST00000578692 FUNDC2Q9BWH2 189 aa11.96□□□□□ -0.49
CRLF3-203ENST00000578692 CEPT1Q9Y6K0 416 aa11.96□□□□□ -0.49
CRLF3-203ENST00000578692 DNAH7Q8WXX0 4024 aa11.96□□□□□ -0.49
CRLF3-203ENST00000578692 STAB2Q8WWQ8 2551 aa11.96□□□□□ -0.49
CRLF3-203ENST00000578692 TMEM213A2RRL7 107 aa11.95□□□□□ -0.5
CRLF3-203ENST00000578692 A8MWP6 167 aa11.95□□□□□ -0.5
CRLF3-203ENST00000578692 OR11H12B2RN74 326 aa11.95□□□□□ -0.5
CRLF3-203ENST00000578692 APOA1P02647 267 aa11.95□□□□□ -0.5
CRLF3-203ENST00000578692 OR13C7P0DN81 318 aa11.95□□□□□ -0.5
CRLF3-203ENST00000578692 VBP1P61758 197 aa11.95□□□□□ -0.5
CRLF3-203ENST00000578692 TSPAN5P62079 268 aa11.95□□□□□ -0.5
CRLF3-203ENST00000578692 ZNF585BQ52M93 769 aa11.95□□□□□ -0.5
CRLF3-203ENST00000578692 ZNF57Q68EA5 555 aaPredicted RBP11.95□□□□□ -0.5
CRLF3-203ENST00000578692 SLC25A24Q6NUK1 477 aa11.95□□□□□ -0.5
CRLF3-203ENST00000578692 PLET1Q6UQ28 207 aa11.95□□□□□ -0.5
CRLF3-203ENST00000578692 HSD17B13Q7Z5P4 300 aaPredicted RBP11.95□□□□□ -0.5
CRLF3-203ENST00000578692 CADM3Q8N126 398 aa11.95□□□□□ -0.5
CRLF3-203ENST00000578692 ZNF502Q8TBZ5 544 aa11.95□□□□□ -0.5
CRLF3-203ENST00000578692 FXYD6Q9H0Q3 95 aa11.95□□□□□ -0.5
CRLF3-203ENST00000578692 NDUFA4L2Q9NRX3 87 aa11.95□□□□□ -0.5
CRLF3-203ENST00000578692 SELENOKQ9Y6D0 94 aa11.95□□□□□ -0.5
CRLF3-203ENST00000578692 SNAPC5O75971 98 aa11.94□□□□□ -0.5
CRLF3-203ENST00000578692 GPR183P32249 361 aa11.94□□□□□ -0.5
CRLF3-203ENST00000578692 G6PCP35575 357 aa11.94□□□□□ -0.5
CRLF3-203ENST00000578692 WT1-ASQ06250 92 aa11.94□□□□□ -0.5
CRLF3-203ENST00000578692 TM4SF20Q53R12 229 aa11.94□□□□□ -0.5
CRLF3-203ENST00000578692 ZFAND6Q6FIF0 208 aa11.94□□□□□ -0.5
CRLF3-203ENST00000578692 LPCAT3Q6P1A2 487 aa11.94□□□□□ -0.5
CRLF3-203ENST00000578692 GDPD1Q8N9F7 314 aa11.94□□□□□ -0.5
CRLF3-203ENST00000578692 VN1R17PQ8TDU5 208 aa11.94□□□□□ -0.5
CRLF3-203ENST00000578692 HINT2Q9BX68 163 aa11.94□□□□□ -0.5
CRLF3-203ENST00000578692 MLXQ9UH92 298 aa11.94□□□□□ -0.5
CRLF3-203ENST00000578692 NSG2Q9Y328 171 aa11.94□□□□□ -0.5
CRLF3-203ENST00000578692 RBMY1BA6NDE4 496 aaKnown RBP11.93□□□□□ -0.5
CRLF3-203ENST00000578692 RBMY1EA6NEQ0 496 aaKnown RBP11.93□□□□□ -0.5
CRLF3-203ENST00000578692 RBMY1DP0C7P1 496 aaKnown RBP11.93□□□□□ -0.5
CRLF3-203ENST00000578692 UNQ9165/PRO28630Q6UXU0 137 aa11.93□□□□□ -0.5
CRLF3-203ENST00000578692 SLC16A13Q7RTY0 426 aa11.93□□□□□ -0.5
CRLF3-203ENST00000578692 SNX29P2Q8IUI4 249 aa11.93□□□□□ -0.5
CRLF3-203ENST00000578692 TMEM61Q8N0U2 210 aa11.93□□□□□ -0.5
CRLF3-203ENST00000578692 WFDC10AQ9H1F0 79 aa11.93□□□□□ -0.5
CRLF3-203ENST00000578692 HIPK2Q9H2X6 1198 aa11.93□□□□□ -0.5
CRLF3-203ENST00000578692 SRD5A3Q9H8P0 318 aa11.93□□□□□ -0.5
CRLF3-203ENST00000578692 SCPEP1Q9HB40 452 aa11.93□□□□□ -0.5
CRLF3-203ENST00000578692 MRPL27Q9P0M9 148 aaKnown RBP11.93□□□□□ -0.5
CRLF3-203ENST00000578692 OR51B2Q9Y5P1 312 aa11.93□□□□□ -0.5
CRLF3-203ENST00000578692 IGHV3-35A0A0C4DH35 117 aa11.92□□□□□ -0.5
CRLF3-203ENST00000578692 C8orf88P0DMB2 117 aa11.92□□□□□ -0.5
CRLF3-203ENST00000578692 ELK1P19419 428 aa11.92□□□□□ -0.5
CRLF3-203ENST00000578692 S100GP29377 79 aa11.92□□□□□ -0.5
CRLF3-203ENST00000578692 ELLP55199 621 aaPredicted RBP11.92□□□□□ -0.5
CRLF3-203ENST00000578692 PHLDA2Q53GA4 152 aa11.92□□□□□ -0.5
CRLF3-203ENST00000578692 LSM10Q969L4 123 aaKnown RBP11.92□□□□□ -0.5
CRLF3-203ENST00000578692 MARC2Q969Z3 335 aa11.92□□□□□ -0.5
CRLF3-203ENST00000578692 FKBP11Q9NYL4 201 aa11.92□□□□□ -0.5
CRLF3-203ENST00000578692 UFC1Q9Y3C8 167 aa11.92□□□□□ -0.5
CRLF3-203ENST00000578692 F11RQ9Y624 299 aaKnown RBP11.92□□□□□ -0.5
CRLF3-203ENST00000578692 TGOLN2O43493 480 aa11.92□□□□□ -0.5
CRLF3-203ENST00000578692 HPGDSO60760 199 aa11.92□□□□□ -0.5
CRLF3-203ENST00000578692 SCAF4O95104 1147 aaKnown RBP11.92□□□□□ -0.5
CRLF3-203ENST00000578692 RORCP51449 518 aa11.92□□□□□ -0.5
CRLF3-203ENST00000578692 ANKRD55Q3KP44 614 aa11.92□□□□□ -0.5
CRLF3-203ENST00000578692 BTNL8Q6UX41 500 aa11.92□□□□□ -0.5
CRLF3-203ENST00000578692 OR52B4Q8NGK2 314 aa11.92□□□□□ -0.5
CRLF3-203ENST00000578692 TMEM56Q96MV1 263 aa11.92□□□□□ -0.5
CRLF3-203ENST00000578692 TSC22D3Q99576 134 aa11.92□□□□□ -0.5
CRLF3-203ENST00000578692 ZNF436Q9C0F3 470 aaPredicted RBP11.92□□□□□ -0.5
CRLF3-203ENST00000578692 RETNQ9HD89 108 aa11.92□□□□□ -0.5
CRLF3-203ENST00000578692 FAM212BQ9NTI7 297 aaPredicted RBP11.92□□□□□ -0.5
CRLF3-203ENST00000578692 PRNDQ9UKY0 176 aa11.92□□□□□ -0.5
CRLF3-203ENST00000578692 TRAV25A0A0B4J276 109 aa11.91□□□□□ -0.5
CRLF3-203ENST00000578692 OR2T8A6NH00 312 aa11.91□□□□□ -0.5
CRLF3-203ENST00000578692 RCVRNP35243 200 aa11.91□□□□□ -0.5
CRLF3-203ENST00000578692 MFAP2P55001 183 aa11.91□□□□□ -0.5
CRLF3-203ENST00000578692 UCP3P55916 312 aa11.91□□□□□ -0.5
CRLF3-203ENST00000578692 MZT2AQ6P582 158 aa11.91□□□□□ -0.5
CRLF3-203ENST00000578692 RBPMS2Q6ZRY4 209 aaKnown RBP11.91□□□□□ -0.5
CRLF3-203ENST00000578692 TBC1D26Q86UD7 250 aa11.91□□□□□ -0.5
CRLF3-203ENST00000578692 OR5B3Q8NH48 314 aa11.91□□□□□ -0.5
CRLF3-203ENST00000578692 IGHV3-21A0A0B4J1V1 117 aa11.9□□□□□ -0.5
CRLF3-203ENST00000578692 FAM25AB3EWG3 89 aa11.9□□□□□ -0.5
CRLF3-203ENST00000578692 FAM25CB3EWG5 89 aa11.9□□□□□ -0.5
CRLF3-203ENST00000578692 FAM25GB3EWG6 89 aa11.9□□□□□ -0.5
CRLF3-203ENST00000578692 SPSB3Q6PJ21 355 aa11.9□□□□□ -0.5
CRLF3-203ENST00000578692 SLC38A6Q8IZM9 456 aa11.9□□□□□ -0.5
CRLF3-203ENST00000578692 OR1L6Q8NGR2 347 aa11.9□□□□□ -0.5
CRLF3-203ENST00000578692 SCARB1Q8WTV0 552 aa11.9□□□□□ -0.5
CRLF3-203ENST00000578692 BSCL2Q96G97 398 aaPredicted RBP11.9□□□□□ -0.5
CRLF3-203ENST00000578692 SEC22AQ96IW7 307 aa11.9□□□□□ -0.5
CRLF3-203ENST00000578692 ATP6V0BQ99437 205 aa11.9□□□□□ -0.5
CRLF3-203ENST00000578692 FAM110AQ9BQ89 295 aa11.9□□□□□ -0.5
CRLF3-203ENST00000578692 TMEM14BQ9NUH8 114 aa11.9□□□□□ -0.5
CRLF3-203ENST00000578692 DBX1A6NMT0 343 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms