RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 HCFC1P51610 2035 aa9□□□□□ -0.97
SKA2-204ENST00000578519 LOC102723971A0A1B0GUV8 181 aa8.99□□□□□ -0.97
SKA2-204ENST00000578519 SEC14L6B5MCN3 397 aa8.99□□□□□ -0.97
SKA2-204ENST00000578519 PRSS46E5RG02 174 aa8.99□□□□□ -0.97
SKA2-204ENST00000578519 C19orf84I3L1E1 186 aa8.99□□□□□ -0.97
SKA2-204ENST00000578519 SCO1O75880 301 aa8.99□□□□□ -0.97
SKA2-204ENST00000578519 LY6HO94772 140 aa8.99□□□□□ -0.97
SKA2-204ENST00000578519 IGLV2-23P01705 113 aa8.99□□□□□ -0.97
SKA2-204ENST00000578519 RNASE2P10153 161 aaKnown RBP8.99□□□□□ -0.97
SKA2-204ENST00000578519 BCL2P10415 239 aa8.99□□□□□ -0.97
SKA2-204ENST00000578519 RHOBP62745 196 aa8.99□□□□□ -0.97
SKA2-204ENST00000578519 PSG5Q15238 335 aa8.99□□□□□ -0.97
SKA2-204ENST00000578519 RHEBQ15382 184 aa8.99□□□□□ -0.97
SKA2-204ENST00000578519 PRSS8Q16651 343 aa8.99□□□□□ -0.97
SKA2-204ENST00000578519 BSXQ3C1V8 233 aa8.99□□□□□ -0.97
SKA2-204ENST00000578519 FAM74A3Q4VXF1 159 aa8.99□□□□□ -0.97
SKA2-204ENST00000578519 LCE2AQ5TA79 106 aaPredicted RBP8.99□□□□□ -0.97
SKA2-204ENST00000578519 OR2T10Q8NGZ9 312 aa8.99□□□□□ -0.97
SKA2-204ENST00000578519 RXFP4Q8TDU9 374 aa8.99□□□□□ -0.97
SKA2-204ENST00000578519 NIPSNAP3BQ9BS92 247 aa8.99□□□□□ -0.97
SKA2-204ENST00000578519 ZNF430Q9H8G1 570 aaPredicted RBP8.99□□□□□ -0.97
SKA2-204ENST00000578519 SMCO4Q9NRQ5 59 aa8.99□□□□□ -0.97
SKA2-204ENST00000578519 PXMP4Q9Y6I8 212 aa8.99□□□□□ -0.97
SKA2-204ENST00000578519 DSCAML1Q8TD84 2053 aa8.99□□□□□ -0.97
SKA2-204ENST00000578519 ARFGEF3Q5TH69 2177 aa8.99□□□□□ -0.97
SKA2-204ENST00000578519 ICE1Q9Y2F5 2266 aa8.98□□□□□ -0.97
SKA2-204ENST00000578519 IGHV2-70DA0A0C4DH43 119 aa8.98□□□□□ -0.97
SKA2-204ENST00000578519 ZFP92A6NM28 416 aa8.98□□□□□ -0.97
SKA2-204ENST00000578519 B4DEV8 164 aa8.98□□□□□ -0.97
SKA2-204ENST00000578519 M0R036 132 aa8.98□□□□□ -0.97
SKA2-204ENST00000578519 CXorf1O96002 111 aa8.98□□□□□ -0.97
SKA2-204ENST00000578519 MOSP00540 346 aa8.98□□□□□ -0.97
SKA2-204ENST00000578519 SRP19P09132 144 aaKnown RBP8.98□□□□□ -0.97
SKA2-204ENST00000578519 OR13C7P0DN81 318 aa8.98□□□□□ -0.97
SKA2-204ENST00000578519 BRS3P32247 399 aa8.98□□□□□ -0.97
SKA2-204ENST00000578519 B2MP61769 119 aa8.98□□□□□ -0.97
SKA2-204ENST00000578519 SELENOTP62341 195 aa8.98□□□□□ -0.97
SKA2-204ENST00000578519 CCL20P78556 96 aa8.98□□□□□ -0.97
SKA2-204ENST00000578519 CD69Q07108 199 aa8.98□□□□□ -0.97
SKA2-204ENST00000578519 TNXAQ16473 311 aa8.98□□□□□ -0.97
SKA2-204ENST00000578519 SP5Q6BEB4 398 aaPredicted RBP8.98□□□□□ -0.97
SKA2-204ENST00000578519 ACSM6Q6P461 480 aa8.98□□□□□ -0.97
SKA2-204ENST00000578519 CLEC2AQ6UVW9 174 aa8.98□□□□□ -0.97
SKA2-204ENST00000578519 PPP1R27Q86WC6 154 aa8.98□□□□□ -0.97
SKA2-204ENST00000578519 RPP25LQ8N5L8 163 aaKnown RBP8.98□□□□□ -0.97
SKA2-204ENST00000578519 Q8N7P7 452 aa8.98□□□□□ -0.97
SKA2-204ENST00000578519 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.98□□□□□ -0.97
SKA2-204ENST00000578519 RAB24Q969Q5 203 aa8.98□□□□□ -0.97
SKA2-204ENST00000578519 VSIRQ9H7M9 311 aa8.98□□□□□ -0.97
SKA2-204ENST00000578519 C1RLQ9NZP8 487 aa8.98□□□□□ -0.97
SKA2-204ENST00000578519 METTL1Q9UBP6 276 aaKnown RBP8.98□□□□□ -0.97
SKA2-204ENST00000578519 SIGLEC9Q9Y336 463 aa8.98□□□□□ -0.97
SKA2-204ENST00000578519 LSM4Q9Y4Z0 139 aaKnown RBP8.98□□□□□ -0.97
SKA2-204ENST00000578519 RFNGQ9Y644 331 aa8.98□□□□□ -0.97
SKA2-204ENST00000578519 MAP1BP46821 2468 aaKnown RBP8.98□□□□□ -0.97
SKA2-204ENST00000578519 PCNX1Q96RV3 2341 aa8.97□□□□□ -0.97
SKA2-204ENST00000578519 ODF3BA8MYP8 253 aa8.97□□□□□ -0.97
SKA2-204ENST00000578519 FAM157AC9JC47 383 aa8.97□□□□□ -0.97
SKA2-204ENST00000578519 TOX4O94842 621 aa8.97□□□□□ -0.97
SKA2-204ENST00000578519 OPN1MWP04001 364 aa8.97□□□□□ -0.97
SKA2-204ENST00000578519 CRYGBP07316 175 aa8.97□□□□□ -0.97
SKA2-204ENST00000578519 OPN1MW2P0DN77 364 aa8.97□□□□□ -0.97
SKA2-204ENST00000578519 OPN1MW3P0DN78 364 aa8.97□□□□□ -0.97
SKA2-204ENST00000578519 ADCYAP1P18509 176 aa8.97□□□□□ -0.97
SKA2-204ENST00000578519 TAS2R45P59539 299 aa8.97□□□□□ -0.97
SKA2-204ENST00000578519 PNRC1Q12796 327 aaPredicted RBP8.97□□□□□ -0.97
SKA2-204ENST00000578519 DIAPH2-AS1Q14236 149 aa8.97□□□□□ -0.97
SKA2-204ENST00000578519 ICAM4Q14773 271 aa8.97□□□□□ -0.97
SKA2-204ENST00000578519 GUCA2BQ16661 112 aa8.97□□□□□ -0.97
SKA2-204ENST00000578519 VMO1Q7Z5L0 202 aa8.97□□□□□ -0.97
SKA2-204ENST00000578519 IQCF2Q8IXL9 164 aa8.97□□□□□ -0.97
SKA2-204ENST00000578519 OR1L4Q8NGR5 311 aa8.97□□□□□ -0.97
SKA2-204ENST00000578519 FAM168AQ92567 244 aa8.97□□□□□ -0.97
SKA2-204ENST00000578519 MALSU1Q96EH3 234 aa8.97□□□□□ -0.97
SKA2-204ENST00000578519 TVP23CQ96ET8 276 aa8.97□□□□□ -0.97
SKA2-204ENST00000578519 MGST2Q99735 147 aa8.97□□□□□ -0.97
SKA2-204ENST00000578519 SCRT1Q9BWW7 348 aa8.97□□□□□ -0.97
SKA2-204ENST00000578519 GGTLC1Q9BX51 225 aa8.97□□□□□ -0.97
SKA2-204ENST00000578519 SIRT7Q9NRC8 400 aa8.97□□□□□ -0.97
SKA2-204ENST00000578519 ARID1AO14497 2285 aa8.97□□□□□ -0.97
SKA2-204ENST00000578519 YLPM1P49750 1951 aaKnown RBP8.97□□□□□ -0.97
SKA2-204ENST00000578519 IGHV3-72A0A0B4J1Y9 119 aa8.96□□□□□ -0.98
SKA2-204ENST00000578519 A0A1W2PPR1 153 aa8.96□□□□□ -0.98
SKA2-204ENST00000578519 TMEM250H0YL14 139 aa8.96□□□□□ -0.98
SKA2-204ENST00000578519 TSPAN4O14817 238 aa8.96□□□□□ -0.98
SKA2-204ENST00000578519 NBR2O15453 112 aa8.96□□□□□ -0.98
SKA2-204ENST00000578519 CNIH1O95406 144 aa8.96□□□□□ -0.98
SKA2-204ENST00000578519 FABP1P07148 127 aa8.96□□□□□ -0.98
SKA2-204ENST00000578519 FBP1P09467 338 aa8.96□□□□□ -0.98
SKA2-204ENST00000578519 COX6B1P14854 86 aa8.96□□□□□ -0.98
SKA2-204ENST00000578519 UBE2E1P51965 193 aa8.96□□□□□ -0.98
SKA2-204ENST00000578519 ZNF726P1Q15940 193 aa8.96□□□□□ -0.98
SKA2-204ENST00000578519 ARSJQ5FYB0 599 aaPredicted RBP8.96□□□□□ -0.98
SKA2-204ENST00000578519 SLC16A13Q7RTY0 426 aa8.96□□□□□ -0.98
SKA2-204ENST00000578519 ZNF114Q8NC26 417 aa8.96□□□□□ -0.98
SKA2-204ENST00000578519 NPBQ8NG41 125 aa8.96□□□□□ -0.98
SKA2-204ENST00000578519 RARRES2Q99969 163 aa8.96□□□□□ -0.98
SKA2-204ENST00000578519 TUBA4BQ9H853 241 aa8.96□□□□□ -0.98
SKA2-204ENST00000578519 SLC25A22Q9H936 323 aa8.96□□□□□ -0.98
SKA2-204ENST00000578519 RPS10P5Q9NQ39 176 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms