RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 FKBP11Q9NYL4 201 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 TAS2R8Q9NYW2 309 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 TAS2R5Q9NYW4 299 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 DNAJC27Q9NZQ0 273 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 CACFD1Q9UGQ2 172 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 NEUROG3Q9Y4Z2 214 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 V9GYH0 126 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 LRRIQ1Q96JM4 1722 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 MYH7BA7E2Y1 1941 aa2.27□□□□□ -2.05
SMCHD1-202ENST00000577300 MAP2P11137 1827 aaKnown RBP2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 FOCADQ5VW36 1801 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 PHLPP1O60346 1717 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 A0A0B4J2A0 478 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 DAPL1A0PJW8 107 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 ZNF850A8MQ14 1090 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 HMSDA8MTL9 139 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 F5H5P2 479 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 M0R1B8 84 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 NPFFO15130 113 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 CXCL13O43927 109 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 HRASP01112 189 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 KRASP01116 189 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 APOA2P02652 100 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 SCTP09683 121 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 ZNF286BP0CG31 522 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 ERGP11308 486 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 BCKDHAP12694 445 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 CXCL3P19876 107 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 DLX1P56177 255 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 UBE2NP61088 152 aaKnown RBP2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 LSM3P62310 102 aaKnown RBP2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 GRB2P62993 217 aaKnown RBP2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 SLC35A1P78382 337 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 ZNF92Q03936 586 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 LAMTOR4Q0VGL1 99 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 HMGN3Q15651 99 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 ZNF141Q15928 474 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 FAM27D1Q5T7N8 215 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 PVRIGQ6DKI7 326 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 TNFAIP8L2Q6P589 184 aaPredicted RBP2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 SLC25A26Q70HW3 274 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 PRSS41Q7RTY9 318 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 ZNF615Q8N8J6 731 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 OR8B12Q8NGG6 310 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 OR4A5Q8NH83 315 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 OR1L1Q8NH94 360 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 JOSD2Q8TAC2 188 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 CNIH3Q8TBE1 160 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 PSMF1Q92530 271 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 TMEM54Q969K7 222 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 SLAMF6Q96DU3 332 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 SCGB3A2Q96PL1 93 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 PITX2Q99697 317 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 NIPSNAP3BQ9BS92 247 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 AGMATQ9BSE5 352 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 SFXN3Q9BWM7 321 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 SAMD10Q9BYL1 202 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 WDR61Q9GZS3 305 aaKnown RBP2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 FBXL15Q9H469 300 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 EDA2RQ9HAV5 297 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 UQCR10Q9UDW1 63 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 SHPKQ9UHJ6 478 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 ZNF222Q9UK12 451 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 FUT9Q9Y231 359 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 YTHDF2Q9Y5A9 579 aaKnown RBP2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 IER3IP1Q9Y5U9 82 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 LINC00312Q9Y6C7 94 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 MYH3P11055 1940 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 SAMD9Q5K651 1589 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 TOPBP1Q92547 1522 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 RPRD2Q5VT52 1461 aaKnown RBP2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 BCL9LQ86UU0 1499 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 A0A1B0GUL6 1792 aa2.26□□□□□ -2.05
SMCHD1-202ENST00000577300 MYH10P35580 1976 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 MYH1P12882 1939 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 TCHHQ07283 1943 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 MYH2Q9UKX2 1941 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 CFAP74Q9C0B2 1584 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 TRAV19A0A0A6YYK7 116 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 IGHV2-26A0A0B4J1V2 119 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 TRAV8-6A0A0B4J262 113 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 MYBPHLA2RUH7 354 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 C7orf71A4D174 169 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 OR51F1A6NGY5 319 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 OR2T8A6NH00 312 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 NCBP2LA6PVI3 153 aaKnown RBP2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 ZNF705FA8MVS1 300 aaPredicted RBP2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 EEF1E1-BLOC1S5C9J1V9 151 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 K7EPK0 472 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 ZNF593O00488 134 aaPredicted RBP2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 CDC42EP2O14613 210 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 EEF1E1O43324 174 aaKnown RBP2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 CD5LO43866 347 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 MT-ATP8P03928 68 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 GPX1P07203 203 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 IL3P08700 152 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 LGALS1P09382 135 aaKnown RBP2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 H2BFMP0C1H6 154 aa2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 ZNF705DP0CH99 300 aaPredicted RBP2.25□□□□□ -2.05
SMCHD1-202ENST00000577300 ZNF705BP0CI00 300 aaPredicted RBP2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms