RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 PRR20AP86496 221 aa8.56□□□□□ -1.04
CTDNEP1-212ENST00000576613 CATR1Q13166 79 aa8.56□□□□□ -1.04
CTDNEP1-212ENST00000576613 MSMO1Q15800 293 aa8.56□□□□□ -1.04
CTDNEP1-212ENST00000576613 OR11H2Q8NH07 326 aa8.56□□□□□ -1.04
CTDNEP1-212ENST00000576613 NUDCD2Q8WVJ2 157 aa8.56□□□□□ -1.04
CTDNEP1-212ENST00000576613 SECTM1Q8WVN6 248 aa8.56□□□□□ -1.04
CTDNEP1-212ENST00000576613 GPHA2Q96T91 129 aa8.56□□□□□ -1.04
CTDNEP1-212ENST00000576613 ANXA10Q9UJ72 324 aa8.56□□□□□ -1.04
CTDNEP1-212ENST00000576613 C11orf94C9JXX5 98 aa8.55□□□□□ -1.04
CTDNEP1-212ENST00000576613 UPK2O00526 184 aa8.55□□□□□ -1.04
CTDNEP1-212ENST00000576613 EBAG9O00559 213 aa8.55□□□□□ -1.04
CTDNEP1-212ENST00000576613 CASQ2O14958 399 aaPredicted RBP8.55□□□□□ -1.04
CTDNEP1-212ENST00000576613 HPRT1P00492 218 aa8.55□□□□□ -1.04
CTDNEP1-212ENST00000576613 SERPINE2P07093 398 aa8.55□□□□□ -1.04
CTDNEP1-212ENST00000576613 ARPC4P59998 168 aa8.55□□□□□ -1.04
CTDNEP1-212ENST00000576613 POU2AF1Q16633 256 aa8.55□□□□□ -1.04
CTDNEP1-212ENST00000576613 SLC25A24Q6NUK1 477 aa8.55□□□□□ -1.04
CTDNEP1-212ENST00000576613 LINC00336Q6ZUF6 198 aa8.55□□□□□ -1.04
CTDNEP1-212ENST00000576613 ZBTB34Q8NCN2 500 aa8.55□□□□□ -1.04
CTDNEP1-212ENST00000576613 DMBX1Q8NFW5 382 aa8.55□□□□□ -1.04
CTDNEP1-212ENST00000576613 DUSP21Q9H596 190 aa8.55□□□□□ -1.04
CTDNEP1-212ENST00000576613 C21orf62Q9NYP8 219 aa8.55□□□□□ -1.04
CTDNEP1-212ENST00000576613 VPS13DQ5THJ4 4388 aa8.54□□□□□ -1.04
CTDNEP1-212ENST00000576613 IGHV3OR16-8A0A075B7F1 116 aa8.54□□□□□ -1.04
CTDNEP1-212ENST00000576613 TMEM235A6NFC5 223 aa8.54□□□□□ -1.04
CTDNEP1-212ENST00000576613 IGLL5B9A064 214 aa8.54□□□□□ -1.04
CTDNEP1-212ENST00000576613 SULT1C2O00338 296 aa8.54□□□□□ -1.04
CTDNEP1-212ENST00000576613 ZNF207O43670 478 aaKnown RBP8.54□□□□□ -1.04
CTDNEP1-212ENST00000576613 MRPS14O60783 128 aaKnown RBP8.54□□□□□ -1.04
CTDNEP1-212ENST00000576613 TRAPPC2P0DI81 140 aa8.54□□□□□ -1.04
CTDNEP1-212ENST00000576613 TRAPPC2BP0DI82 140 aa8.54□□□□□ -1.04
CTDNEP1-212ENST00000576613 OR13C7P0DN81 318 aa8.54□□□□□ -1.04
CTDNEP1-212ENST00000576613 PRSS48Q7RTY5 328 aa8.54□□□□□ -1.04
CTDNEP1-212ENST00000576613 UBAC2Q8NBM4 344 aa8.54□□□□□ -1.04
CTDNEP1-212ENST00000576613 OR10W1Q8NGF6 305 aa8.54□□□□□ -1.04
CTDNEP1-212ENST00000576613 OR13F1Q8NGS4 319 aa8.54□□□□□ -1.04
CTDNEP1-212ENST00000576613 CMTM3Q96MX0 182 aa8.54□□□□□ -1.04
CTDNEP1-212ENST00000576613 CHRDL1Q9BU40 450 aa8.54□□□□□ -1.04
CTDNEP1-212ENST00000576613 CCL28Q9NRJ3 127 aa8.54□□□□□ -1.04
CTDNEP1-212ENST00000576613 TMEM140Q9NV12 185 aa8.54□□□□□ -1.04
CTDNEP1-212ENST00000576613 SMPXQ9UHP9 88 aa8.54□□□□□ -1.04
CTDNEP1-212ENST00000576613 ETV7Q9Y603 341 aa8.54□□□□□ -1.04
CTDNEP1-212ENST00000576613 KIAA1109Q2LD37 5005 aa8.54□□□□□ -1.04
CTDNEP1-212ENST00000576613 TRAV3A0A0B4J244 114 aa8.53□□□□□ -1.04
CTDNEP1-212ENST00000576613 CA1P00915 261 aaPredicted RBP8.53□□□□□ -1.04
CTDNEP1-212ENST00000576613 FCGR2CP31995 323 aa8.53□□□□□ -1.04
CTDNEP1-212ENST00000576613 TFPI2P48307 235 aa8.53□□□□□ -1.04
CTDNEP1-212ENST00000576613 MFAP2P55001 183 aa8.53□□□□□ -1.04
CTDNEP1-212ENST00000576613 PAFAH1B2P68402 229 aa8.53□□□□□ -1.04
CTDNEP1-212ENST00000576613 RELQ04864 619 aaPredicted RBP8.53□□□□□ -1.04
CTDNEP1-212ENST00000576613 WT1-ASQ06250 92 aa8.53□□□□□ -1.04
CTDNEP1-212ENST00000576613 TMEM187Q14656 261 aa8.53□□□□□ -1.04
CTDNEP1-212ENST00000576613 ZNF124Q15973 351 aa8.53□□□□□ -1.04
CTDNEP1-212ENST00000576613 Q56UQ5 140 aa8.53□□□□□ -1.04
CTDNEP1-212ENST00000576613 GVQW1Q8N7I0 195 aa8.53□□□□□ -1.04
CTDNEP1-212ENST00000576613 TMEM116Q8NCL8 245 aa8.53□□□□□ -1.04
CTDNEP1-212ENST00000576613 OR1L8Q8NGR8 309 aa8.53□□□□□ -1.04
CTDNEP1-212ENST00000576613 SCARB1Q8WTV0 552 aa8.53□□□□□ -1.04
CTDNEP1-212ENST00000576613 RNF2Q99496 336 aa8.53□□□□□ -1.04
CTDNEP1-212ENST00000576613 RHPN1-AS1Q9BWJ2 59 aa8.53□□□□□ -1.04
CTDNEP1-212ENST00000576613 PLEKHA2Q9HB19 425 aa8.53□□□□□ -1.04
CTDNEP1-212ENST00000576613 COMMD9Q9P000 198 aa8.53□□□□□ -1.04
CTDNEP1-212ENST00000576613 F11RQ9Y624 299 aaKnown RBP8.53□□□□□ -1.04
CTDNEP1-212ENST00000576613 IGKV3-7A0A075B6H7 116 aa8.52□□□□□ -1.05
CTDNEP1-212ENST00000576613 IGHV7-4-1A0A0J9YVY3 117 aa8.52□□□□□ -1.05
CTDNEP1-212ENST00000576613 CHEK1O14757 476 aa8.52□□□□□ -1.05
CTDNEP1-212ENST00000576613 XRCC3O43542 346 aa8.52□□□□□ -1.05
CTDNEP1-212ENST00000576613 SSX5O60225 188 aa8.52□□□□□ -1.05
CTDNEP1-212ENST00000576613 PPYP01298 95 aa8.52□□□□□ -1.05
CTDNEP1-212ENST00000576613 MED14OSP0DP75 135 aa8.52□□□□□ -1.05
CTDNEP1-212ENST00000576613 ERVK-16P61578 105 aa8.52□□□□□ -1.05
CTDNEP1-212ENST00000576613 ZNF367Q7RTV3 350 aa8.52□□□□□ -1.05
CTDNEP1-212ENST00000576613 NR2C2APQ86WQ0 139 aa8.52□□□□□ -1.05
CTDNEP1-212ENST00000576613 CENPSQ8N2Z9 138 aa8.52□□□□□ -1.05
CTDNEP1-212ENST00000576613 BEST4Q8NFU0 473 aa8.52□□□□□ -1.05
CTDNEP1-212ENST00000576613 BORCS5Q969J3 196 aa8.52□□□□□ -1.05
CTDNEP1-212ENST00000576613 LSM10Q969L4 123 aaKnown RBP8.52□□□□□ -1.05
CTDNEP1-212ENST00000576613 HINT2Q9BX68 163 aa8.52□□□□□ -1.05
CTDNEP1-212ENST00000576613 SLC5A7Q9GZV3 580 aa8.52□□□□□ -1.05
CTDNEP1-212ENST00000576613 HRH4Q9H3N8 390 aa8.52□□□□□ -1.05
CTDNEP1-212ENST00000576613 NDUFB11Q9NX14 153 aa8.52□□□□□ -1.05
CTDNEP1-212ENST00000576613 APLNQ9ULZ1 77 aa8.52□□□□□ -1.05
CTDNEP1-212ENST00000576613 IGHV3-21A0A0B4J1V1 117 aa8.51□□□□□ -1.05
CTDNEP1-212ENST00000576613 TEX50A0A1B0GTY4 177 aa8.51□□□□□ -1.05
CTDNEP1-212ENST00000576613 TRDV1A0A1B0GX56 115 aa8.51□□□□□ -1.05
CTDNEP1-212ENST00000576613 F8W735 103 aaPredicted RBP8.51□□□□□ -1.05
CTDNEP1-212ENST00000576613 DEFB4AO15263 64 aa8.51□□□□□ -1.05
CTDNEP1-212ENST00000576613 NUPL2O15504 423 aaKnown RBP8.51□□□□□ -1.05
CTDNEP1-212ENST00000576613 YIF1AO95070 293 aa8.51□□□□□ -1.05
CTDNEP1-212ENST00000576613 CD5P06127 495 aa8.51□□□□□ -1.05
CTDNEP1-212ENST00000576613 TBCEQ15813 527 aaPredicted RBP8.51□□□□□ -1.05
CTDNEP1-212ENST00000576613 AADACL3Q5VUY0 350 aa8.51□□□□□ -1.05
CTDNEP1-212ENST00000576613 OR51H1Q8NH63 302 aa8.51□□□□□ -1.05
CTDNEP1-212ENST00000576613 DNAH6Q9C0G6 4158 aa8.5□□□□□ -1.05
CTDNEP1-212ENST00000576613 TRAV14DV4A0A0A6YYC5 116 aa8.5□□□□□ -1.05
CTDNEP1-212ENST00000576613 SMIM30A4D0T7 59 aa8.5□□□□□ -1.05
CTDNEP1-212ENST00000576613 MARCH11A6NNE9 402 aa8.5□□□□□ -1.05
CTDNEP1-212ENST00000576613 C15orf61A6NNL5 157 aa8.5□□□□□ -1.05
CTDNEP1-212ENST00000576613 NOTOA8MTQ0 251 aa8.5□□□□□ -1.05
CTDNEP1-212ENST00000576613 K7EIM0 57 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms