RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 TCRBP04435 133 aa1.33□□□□□ -2.2
CDC27-219ENST00000576484 HIST1H1TP22492 207 aaPredicted RBP1.33□□□□□ -2.2
CDC27-219ENST00000576484 S100A7P31151 101 aa1.33□□□□□ -2.2
CDC27-219ENST00000576484 HAAOP46952 286 aa1.33□□□□□ -2.2
CDC27-219ENST00000576484 RANP62826 216 aaKnown RBP1.33□□□□□ -2.2
CDC27-219ENST00000576484 CCL7P80098 99 aa1.33□□□□□ -2.2
CDC27-219ENST00000576484 AESQ08117 197 aa1.33□□□□□ -2.2
CDC27-219ENST00000576484 FADDQ13158 208 aa1.33□□□□□ -2.2
CDC27-219ENST00000576484 GRK1Q15835 563 aa1.33□□□□□ -2.2
CDC27-219ENST00000576484 GUK1Q16774 197 aa1.33□□□□□ -2.2
CDC27-219ENST00000576484 OR51T1Q8NGJ9 327 aa1.33□□□□□ -2.2
CDC27-219ENST00000576484 OR2T4Q8NH00 348 aa1.33□□□□□ -2.2
CDC27-219ENST00000576484 SLC7A6Q92536 515 aa1.33□□□□□ -2.2
CDC27-219ENST00000576484 IMMP2LQ96T52 175 aa1.33□□□□□ -2.2
CDC27-219ENST00000576484 VCX3BQ9H321 246 aa1.33□□□□□ -2.2
CDC27-219ENST00000576484 PAQR5Q9NXK6 330 aaPredicted RBP1.33□□□□□ -2.2
CDC27-219ENST00000576484 TIMM9Q9Y5J7 89 aa1.33□□□□□ -2.2
CDC27-219ENST00000576484 SIPA1L1O43166 1804 aa1.32□□□□□ -2.2
CDC27-219ENST00000576484 TRBV20OR9-2A0A075B6H5 130 aa1.32□□□□□ -2.2
CDC27-219ENST00000576484 TRAV7A0A075B6U4 112 aa1.32□□□□□ -2.2
CDC27-219ENST00000576484 A0A0J9YY10 115 aa1.32□□□□□ -2.2
CDC27-219ENST00000576484 A0A1B0GX78 115 aa1.32□□□□□ -2.2
CDC27-219ENST00000576484 PQLC2LA1A4F0 135 aa1.32□□□□□ -2.2
CDC27-219ENST00000576484 H7C2G1 150 aa1.32□□□□□ -2.2
CDC27-219ENST00000576484 LGALS1P09382 135 aaKnown RBP1.32□□□□□ -2.2
CDC27-219ENST00000576484 TFPTP0C1Z6 253 aa1.32□□□□□ -2.2
CDC27-219ENST00000576484 CTXN2P0C2S0 81 aa1.32□□□□□ -2.2
CDC27-219ENST00000576484 RPL28P46779 137 aaKnown RBP1.32□□□□□ -2.2
CDC27-219ENST00000576484 RAB14P61106 215 aa1.32□□□□□ -2.2
CDC27-219ENST00000576484 HIST1H4AP62805 103 aaKnown RBP1.32□□□□□ -2.2
CDC27-219ENST00000576484 GLO1Q04760 184 aa1.32□□□□□ -2.2
CDC27-219ENST00000576484 ZNF705AQ6ZN79 300 aaPredicted RBP1.32□□□□□ -2.2
CDC27-219ENST00000576484 DCUN1D1Q96GG9 259 aa1.32□□□□□ -2.2
CDC27-219ENST00000576484 EFCAB1Q9HAE3 211 aa1.32□□□□□ -2.2
CDC27-219ENST00000576484 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.32□□□□□ -2.2
CDC27-219ENST00000576484 MRPL27Q9P0M9 148 aaKnown RBP1.32□□□□□ -2.2
CDC27-219ENST00000576484 FUT9Q9Y231 359 aa1.32□□□□□ -2.2
CDC27-219ENST00000576484 ZFHX2Q9C0A1 2572 aaPredicted RBP1.31□□□□□ -2.2
CDC27-219ENST00000576484 IGHV1-18A0A0C4DH31 117 aa1.31□□□□□ -2.2
CDC27-219ENST00000576484 TMEM210A6NLX4 147 aa1.31□□□□□ -2.2
CDC27-219ENST00000576484 TMEM114B3SHH9 223 aa1.31□□□□□ -2.2
CDC27-219ENST00000576484 H3BT86 120 aa1.31□□□□□ -2.2
CDC27-219ENST00000576484 ZNF737O75373 536 aa1.31□□□□□ -2.2
CDC27-219ENST00000576484 HLA-DRB1P01911 266 aa1.31□□□□□ -2.2
CDC27-219ENST00000576484 TTRP02766 147 aa1.31□□□□□ -2.2
CDC27-219ENST00000576484 PRM2P04554 102 aa1.31□□□□□ -2.2
CDC27-219ENST00000576484 MSMBP08118 114 aa1.31□□□□□ -2.2
CDC27-219ENST00000576484 MSNP26038 577 aaKnown RBP1.31□□□□□ -2.2
CDC27-219ENST00000576484 TMEM258P61165 79 aa1.31□□□□□ -2.2
CDC27-219ENST00000576484 SNRPD2P62316 118 aaKnown RBP1.31□□□□□ -2.2
CDC27-219ENST00000576484 CCL20P78556 96 aa1.31□□□□□ -2.2
CDC27-219ENST00000576484 RPL18Q07020 188 aaKnown RBP1.31□□□□□ -2.2
CDC27-219ENST00000576484 SRSF6Q13247 344 aaKnown RBP1.31□□□□□ -2.2
CDC27-219ENST00000576484 EDDM3AQ14507 147 aa1.31□□□□□ -2.2
CDC27-219ENST00000576484 Q6ZS49 121 aa1.31□□□□□ -2.2
CDC27-219ENST00000576484 RPP25LQ8N5L8 163 aaKnown RBP1.31□□□□□ -2.2
CDC27-219ENST00000576484 MRPL30Q8TCC3 161 aaKnown RBP1.31□□□□□ -2.2
CDC27-219ENST00000576484 KLK6Q92876 244 aa1.31□□□□□ -2.2
CDC27-219ENST00000576484 PRAP1Q96NZ9 151 aa1.31□□□□□ -2.2
CDC27-219ENST00000576484 ERMAPQ96PL5 475 aaPredicted RBP1.31□□□□□ -2.2
CDC27-219ENST00000576484 PPP1R2P1Q96PQ5 205 aa1.31□□□□□ -2.2
CDC27-219ENST00000576484 DOHHQ9BU89 302 aa1.31□□□□□ -2.2
CDC27-219ENST00000576484 OR8D2Q9GZM6 311 aa1.31□□□□□ -2.2
CDC27-219ENST00000576484 WDR61Q9GZS3 305 aaKnown RBP1.31□□□□□ -2.2
CDC27-219ENST00000576484 CHST6Q9GZX3 395 aa1.31□□□□□ -2.2
CDC27-219ENST00000576484 PRTFDC1Q9NRG1 225 aa1.31□□□□□ -2.2
CDC27-219ENST00000576484 CISHQ9NSE2 258 aa1.31□□□□□ -2.2
CDC27-219ENST00000576484 CMTM6Q9NX76 183 aa1.31□□□□□ -2.2
CDC27-219ENST00000576484 IL36BQ9NZH7 164 aa1.31□□□□□ -2.2
CDC27-219ENST00000576484 KIAA2026Q5HYC2 2103 aa1.31□□□□□ -2.2
CDC27-219ENST00000576484 A0A087WUJ7 227 aa1.3□□□□□ -2.2
CDC27-219ENST00000576484 TRAV38-1A0A0B4J264 116 aa1.3□□□□□ -2.2
CDC27-219ENST00000576484 IRGMA1A4Y4 181 aa1.3□□□□□ -2.2
CDC27-219ENST00000576484 FAAHO00519 579 aa1.3□□□□□ -2.2
CDC27-219ENST00000576484 IGHV3-7P01780 117 aa1.3□□□□□ -2.2
CDC27-219ENST00000576484 HLA-DMBP28068 263 aa1.3□□□□□ -2.2
CDC27-219ENST00000576484 EVX1P49640 407 aa1.3□□□□□ -2.2
CDC27-219ENST00000576484 AP3S2P59780 193 aa1.3□□□□□ -2.2
CDC27-219ENST00000576484 ERVS71-1P61550 626 aa1.3□□□□□ -2.2
CDC27-219ENST00000576484 STX5Q13190 355 aa1.3□□□□□ -2.2
CDC27-219ENST00000576484 TMEM155Q4W5P6 130 aa1.3□□□□□ -2.2
CDC27-219ENST00000576484 AKIRIN2Q53H80 203 aa1.3□□□□□ -2.2
CDC27-219ENST00000576484 IBA57Q5T440 356 aaKnown RBP1.3□□□□□ -2.2
CDC27-219ENST00000576484 ACOT12Q8WYK0 555 aa1.3□□□□□ -2.2
CDC27-219ENST00000576484 ITFG2Q969R8 447 aa1.3□□□□□ -2.2
CDC27-219ENST00000576484 BORCS7Q96B45 105 aa1.3□□□□□ -2.2
CDC27-219ENST00000576484 HSPB9Q9BQS6 159 aa1.3□□□□□ -2.2
CDC27-219ENST00000576484 ULBP3Q9BZM4 244 aa1.3□□□□□ -2.2
CDC27-219ENST00000576484 COMMD5Q9GZQ3 224 aa1.3□□□□□ -2.2
CDC27-219ENST00000576484 NAT8Q9UHE5 227 aa1.3□□□□□ -2.2
CDC27-219ENST00000576484 PKIGQ9Y2B9 76 aa1.3□□□□□ -2.2
CDC27-219ENST00000576484 TIMM22Q9Y584 194 aa1.3□□□□□ -2.2
CDC27-219ENST00000576484 FLG2Q5D862 2391 aaPredicted RBP1.3□□□□□ -2.2
CDC27-219ENST00000576484 NUP155O75694 1391 aa1.3□□□□□ -2.2
CDC27-219ENST00000576484 FLT4P35916 1363 aa1.3□□□□□ -2.2
CDC27-219ENST00000576484 MTUS2Q5JR59 1369 aa1.3□□□□□ -2.2
CDC27-219ENST00000576484 ZFYVE9O95405 1425 aa1.3□□□□□ -2.2
CDC27-219ENST00000576484 WRNQ14191 1432 aaPredicted RBP eCLIP1.3□□□□□ -2.2
CDC27-219ENST00000576484 DISP1Q96F81 1524 aa1.3□□□□□ -2.2
CDC27-219ENST00000576484 SMIM9A6NGZ8 99 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms