RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 FGF16O43320 207 aa6.21□□□□□ -1.42
CCDC40-215ENST00000576033 BCL2L11O43521 198 aa6.21□□□□□ -1.42
CCDC40-215ENST00000576033 S1PR2O95136 353 aa6.21□□□□□ -1.42
CCDC40-215ENST00000576033 IGKV1-39P01597 117 aa6.21□□□□□ -1.42
CCDC40-215ENST00000576033 IGHG2P01859 326 aa6.21□□□□□ -1.42
CCDC40-215ENST00000576033 MBPP02686 304 aaPredicted RBP6.21□□□□□ -1.42
CCDC40-215ENST00000576033 IGKV1D-39P04432 117 aa6.21□□□□□ -1.42
CCDC40-215ENST00000576033 CRYGBP07316 175 aa6.21□□□□□ -1.42
CCDC40-215ENST00000576033 P0C879 139 aa6.21□□□□□ -1.42
CCDC40-215ENST00000576033 PET100P0DJ07 73 aa6.21□□□□□ -1.42
CCDC40-215ENST00000576033 SAA1P0DJI8 122 aaPredicted RBP6.21□□□□□ -1.42
CCDC40-215ENST00000576033 EGR2P11161 476 aaPredicted RBP6.21□□□□□ -1.42
CCDC40-215ENST00000576033 S100GP29377 79 aa6.21□□□□□ -1.42
CCDC40-215ENST00000576033 THBS3P49746 956 aa6.21□□□□□ -1.42
CCDC40-215ENST00000576033 EXOSC2Q13868 293 aaKnown RBP6.21□□□□□ -1.42
CCDC40-215ENST00000576033 ECSCRQ19T08 205 aa6.21□□□□□ -1.42
CCDC40-215ENST00000576033 NSUN5P1Q3KNT7 163 aa6.21□□□□□ -1.42
CCDC40-215ENST00000576033 LRRC37A5PQ49AS3 106 aa6.21□□□□□ -1.42
CCDC40-215ENST00000576033 TMEM268Q5VZI3 342 aa6.21□□□□□ -1.42
CCDC40-215ENST00000576033 SLC35E3Q7Z769 313 aa6.21□□□□□ -1.42
CCDC40-215ENST00000576033 SLC51BQ86UW2 128 aa6.21□□□□□ -1.42
CCDC40-215ENST00000576033 PDPNQ86YL7 162 aa6.21□□□□□ -1.42
CCDC40-215ENST00000576033 TCTEX1D1Q8N7M0 179 aa6.21□□□□□ -1.42
CCDC40-215ENST00000576033 DMBX1Q8NFW5 382 aa6.21□□□□□ -1.42
CCDC40-215ENST00000576033 NPBQ8NG41 125 aa6.21□□□□□ -1.42
CCDC40-215ENST00000576033 STOML3Q8TAV4 291 aa6.21□□□□□ -1.42
CCDC40-215ENST00000576033 LSM10Q969L4 123 aaKnown RBP6.21□□□□□ -1.42
CCDC40-215ENST00000576033 RASL11BQ9BPW5 248 aa6.21□□□□□ -1.42
CCDC40-215ENST00000576033 ARL6Q9H0F7 186 aa6.21□□□□□ -1.42
CCDC40-215ENST00000576033 LIN7CQ9NUP9 197 aaKnown RBP6.21□□□□□ -1.42
CCDC40-215ENST00000576033 RCL1Q9Y2P8 373 aaKnown RBP6.21□□□□□ -1.42
CCDC40-215ENST00000576033 TNCP24821 2201 aa6.21□□□□□ -1.42
CCDC40-215ENST00000576033 A0A0G2JRQ6 117 aa6.2□□□□□ -1.42
CCDC40-215ENST00000576033 A0A1B0GW64 132 aa6.2□□□□□ -1.42
CCDC40-215ENST00000576033 MSGN1A6NI15 193 aa6.2□□□□□ -1.42
CCDC40-215ENST00000576033 SHOXO15266 292 aa6.2□□□□□ -1.42
CCDC40-215ENST00000576033 SOX15O60248 233 aa6.2□□□□□ -1.42
CCDC40-215ENST00000576033 IFNA7P01567 189 aa6.2□□□□□ -1.42
CCDC40-215ENST00000576033 HLA-DRB1P01911 266 aa6.2□□□□□ -1.42
CCDC40-215ENST00000576033 CX3CL1P78423 397 aa6.2□□□□□ -1.42
CCDC40-215ENST00000576033 ID3Q02535 119 aa6.2□□□□□ -1.42
CCDC40-215ENST00000576033 CFHR3Q02985 330 aa6.2□□□□□ -1.42
CCDC40-215ENST00000576033 PLGLAQ15195 96 aa6.2□□□□□ -1.42
CCDC40-215ENST00000576033 IZUMO4Q1ZYL8 232 aa6.2□□□□□ -1.42
CCDC40-215ENST00000576033 TMEM177Q53S58 311 aa6.2□□□□□ -1.42
CCDC40-215ENST00000576033 CLLU1Q5K131 121 aa6.2□□□□□ -1.42
CCDC40-215ENST00000576033 ASPHD1Q5U4P2 390 aa6.2□□□□□ -1.42
CCDC40-215ENST00000576033 ZNF66Q6ZN08 573 aa6.2□□□□□ -1.42
CCDC40-215ENST00000576033 ZNF695Q8IW36 515 aa6.2□□□□□ -1.42
CCDC40-215ENST00000576033 STPG2Q8N412 459 aa6.2□□□□□ -1.42
CCDC40-215ENST00000576033 OR5AU1Q8NGC0 362 aa6.2□□□□□ -1.42
CCDC40-215ENST00000576033 FLYWCH2Q96CP2 140 aaKnown RBP6.2□□□□□ -1.42
CCDC40-215ENST00000576033 DUX3Q96PT4 197 aa6.2□□□□□ -1.42
CCDC40-215ENST00000576033 HSD17B10Q99714 261 aaKnown RBP6.2□□□□□ -1.42
CCDC40-215ENST00000576033 SPIN2AQ99865 258 aa6.2□□□□□ -1.42
CCDC40-215ENST00000576033 SPIN2BQ9BPZ2 258 aa6.2□□□□□ -1.42
CCDC40-215ENST00000576033 CYTL1Q9NRR1 136 aa6.2□□□□□ -1.42
CCDC40-215ENST00000576033 ZFP57Q9NU63 452 aa6.2□□□□□ -1.42
CCDC40-215ENST00000576033 KIAA1456Q9P272 454 aa6.2□□□□□ -1.42
CCDC40-215ENST00000576033 PRKDCP78527 4128 aaKnown RBP6.19□□□□□ -1.42
CCDC40-215ENST00000576033 A0A1B0GU03 582 aa6.19□□□□□ -1.42
CCDC40-215ENST00000576033 PSMB11A5LHX3 300 aa6.19□□□□□ -1.42
CCDC40-215ENST00000576033 LINC00862A6NCI5 91 aa6.19□□□□□ -1.42
CCDC40-215ENST00000576033 E5RGE8 158 aa6.19□□□□□ -1.42
CCDC40-215ENST00000576033 E7EUB6 86 aa6.19□□□□□ -1.42
CCDC40-215ENST00000576033 RBFOX2O43251 390 aaKnown RBP eCLIP6.19□□□□□ -1.42
CCDC40-215ENST00000576033 TSC22D2O75157 780 aa6.19□□□□□ -1.42
CCDC40-215ENST00000576033 FBXO24O75426 580 aa6.19□□□□□ -1.42
CCDC40-215ENST00000576033 RBMXL2O75526 392 aaKnown RBP6.19□□□□□ -1.42
CCDC40-215ENST00000576033 IGKV1-5P01602 117 aa6.19□□□□□ -1.42
CCDC40-215ENST00000576033 OPN1MWP04001 364 aa6.19□□□□□ -1.42
CCDC40-215ENST00000576033 RPLP1P05386 114 aaKnown RBP6.19□□□□□ -1.42
CCDC40-215ENST00000576033 OPN1MW2P0DN77 364 aa6.19□□□□□ -1.42
CCDC40-215ENST00000576033 OPN1MW3P0DN78 364 aa6.19□□□□□ -1.42
CCDC40-215ENST00000576033 HTR2BP41595 481 aa6.19□□□□□ -1.42
CCDC40-215ENST00000576033 RTL8BQ17RB0 113 aa6.19□□□□□ -1.42
CCDC40-215ENST00000576033 DEFB136Q30KP8 78 aa6.19□□□□□ -1.42
CCDC40-215ENST00000576033 AARDQ4LEZ3 155 aa6.19□□□□□ -1.42
CCDC40-215ENST00000576033 C19orf54Q5BKX5 351 aa6.19□□□□□ -1.42
CCDC40-215ENST00000576033 KHDC1LQ5JSQ8 128 aa6.19□□□□□ -1.42
CCDC40-215ENST00000576033 SPAG16Q8N0X2 631 aa6.19□□□□□ -1.42
CCDC40-215ENST00000576033 INO80EQ8NBZ0 244 aaPredicted RBP6.19□□□□□ -1.42
CCDC40-215ENST00000576033 OR8H1Q8NGG4 311 aa6.19□□□□□ -1.42
CCDC40-215ENST00000576033 ABHD5Q8WTS1 349 aa6.19□□□□□ -1.42
CCDC40-215ENST00000576033 ST8SIA2Q92186 375 aa6.19□□□□□ -1.42
CCDC40-215ENST00000576033 DCUN1D4Q92564 292 aa6.19□□□□□ -1.42
CCDC40-215ENST00000576033 GPR146Q96CH1 333 aa6.19□□□□□ -1.42
CCDC40-215ENST00000576033 PHYHIPLQ96FC7 376 aa6.19□□□□□ -1.42
CCDC40-215ENST00000576033 KLK15Q9H2R5 256 aa6.19□□□□□ -1.42
CCDC40-215ENST00000576033 ZNF430Q9H8G1 570 aaPredicted RBP6.19□□□□□ -1.42
CCDC40-215ENST00000576033 PLEKHA2Q9HB19 425 aa6.19□□□□□ -1.42
CCDC40-215ENST00000576033 COA4Q9NYJ1 87 aa6.19□□□□□ -1.42
CCDC40-215ENST00000576033 GSKIPQ9P0R6 139 aa6.19□□□□□ -1.42
CCDC40-215ENST00000576033 UBQLN2Q9UHD9 624 aa6.19□□□□□ -1.42
CCDC40-215ENST00000576033 NSG2Q9Y328 171 aa6.19□□□□□ -1.42
CCDC40-215ENST00000576033 A0A1B0GUS0 222 aa6.18□□□□□ -1.42
CCDC40-215ENST00000576033 KANTRA0A1W2PQU2 76 aa6.18□□□□□ -1.42
CCDC40-215ENST00000576033 CGB1A6NKQ9 187 aa6.18□□□□□ -1.42
CCDC40-215ENST00000576033 M0QZK8 103 aa6.18□□□□□ -1.42
CCDC40-215ENST00000576033 TAAR5O14804 337 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms