RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 TPPP2P59282 170 aa10.31□□□□□ -0.76
RPAIN-216ENST00000575599 SUPT4H1P63272 117 aaKnown RBP10.31□□□□□ -0.76
RPAIN-216ENST00000575599 MRGPRG-AS1Q2M3A8 158 aa10.31□□□□□ -0.76
RPAIN-216ENST00000575599 SSX9Q7RTT3 188 aa10.31□□□□□ -0.76
RPAIN-216ENST00000575599 MITD1Q8WV92 249 aa10.31□□□□□ -0.76
RPAIN-216ENST00000575599 RCC1LQ96I51 464 aaKnown RBP10.31□□□□□ -0.76
RPAIN-216ENST00000575599 UBE2E2Q96LR5 201 aa10.31□□□□□ -0.76
RPAIN-216ENST00000575599 TP53RKQ96S44 253 aa10.31□□□□□ -0.76
RPAIN-216ENST00000575599 P2RX4Q99571 388 aa10.31□□□□□ -0.76
RPAIN-216ENST00000575599 TMEM222Q9H0R3 208 aa10.31□□□□□ -0.76
RPAIN-216ENST00000575599 ZNF430Q9H8G1 570 aaPredicted RBP10.31□□□□□ -0.76
RPAIN-216ENST00000575599 ZNF355PQ9NSJ1 428 aa10.31□□□□□ -0.76
RPAIN-216ENST00000575599 A0A0B4J293 547 aa10.3□□□□□ -0.76
RPAIN-216ENST00000575599 A0A0B4J2A0 478 aa10.3□□□□□ -0.76
RPAIN-216ENST00000575599 A0A1B0GVG6 124 aa10.3□□□□□ -0.76
RPAIN-216ENST00000575599 IFNA21P01568 189 aa10.3□□□□□ -0.76
RPAIN-216ENST00000575599 PRB2P02812 416 aaPredicted RBP10.3□□□□□ -0.76
RPAIN-216ENST00000575599 RPA2P15927 270 aa10.3□□□□□ -0.76
RPAIN-216ENST00000575599 LPAR6P43657 344 aa10.3□□□□□ -0.76
RPAIN-216ENST00000575599 KIAA0141Q14154 515 aaPredicted RBP10.3□□□□□ -0.76
RPAIN-216ENST00000575599 TMEM187Q14656 261 aa10.3□□□□□ -0.76
RPAIN-216ENST00000575599 TMEM268Q5VZI3 342 aa10.3□□□□□ -0.76
RPAIN-216ENST00000575599 OR5T1Q8NG75 326 aa10.3□□□□□ -0.76
RPAIN-216ENST00000575599 OR11H1Q8NG94 326 aa10.3□□□□□ -0.76
RPAIN-216ENST00000575599 SRSF12Q8WXF0 261 aaKnown RBP10.3□□□□□ -0.76
RPAIN-216ENST00000575599 SHPKQ9UHJ6 478 aa10.3□□□□□ -0.76
RPAIN-216ENST00000575599 MSGN1A6NI15 193 aa10.29□□□□□ -0.76
RPAIN-216ENST00000575599 KBTBD11O94819 623 aa10.29□□□□□ -0.76
RPAIN-216ENST00000575599 OR2A4O95047 310 aa10.29□□□□□ -0.76
RPAIN-216ENST00000575599 HPRT1P00492 218 aa10.29□□□□□ -0.76
RPAIN-216ENST00000575599 HRASP01112 189 aa10.29□□□□□ -0.76
RPAIN-216ENST00000575599 IGHV3-11P01762 117 aa10.29□□□□□ -0.76
RPAIN-216ENST00000575599 TRGV3P03979 118 aa10.29□□□□□ -0.76
RPAIN-216ENST00000575599 UCP1P25874 307 aa10.29□□□□□ -0.76
RPAIN-216ENST00000575599 RRAS2P62070 204 aaPredicted RBP10.29□□□□□ -0.76
RPAIN-216ENST00000575599 ANKRD55Q3KP44 614 aa10.29□□□□□ -0.76
RPAIN-216ENST00000575599 C10orf55Q5SWW7 151 aa10.29□□□□□ -0.76
RPAIN-216ENST00000575599 KPRPQ5T749 579 aaPredicted RBP10.29□□□□□ -0.76
RPAIN-216ENST00000575599 ASPHD1Q5U4P2 390 aa10.29□□□□□ -0.76
RPAIN-216ENST00000575599 MMD2Q8IY49 270 aa10.29□□□□□ -0.76
RPAIN-216ENST00000575599 VSTM2AQ8TAG5 236 aa10.29□□□□□ -0.76
RPAIN-216ENST00000575599 GLYATL2Q8WU03 294 aa10.29□□□□□ -0.76
RPAIN-216ENST00000575599 RBPMSQ93062 196 aaKnown RBP10.29□□□□□ -0.76
RPAIN-216ENST00000575599 RRNAD1Q96FB5 475 aaKnown RBP10.29□□□□□ -0.76
RPAIN-216ENST00000575599 RHOVQ96L33 236 aa10.29□□□□□ -0.76
RPAIN-216ENST00000575599 OR2A7Q96R45 310 aa10.29□□□□□ -0.76
RPAIN-216ENST00000575599 AIFM2Q9BRQ8 373 aa10.29□□□□□ -0.76
RPAIN-216ENST00000575599 KRTAP9-2Q9BYQ4 174 aa10.29□□□□□ -0.76
RPAIN-216ENST00000575599 FAM212BQ9NTI7 297 aaPredicted RBP10.29□□□□□ -0.76
RPAIN-216ENST00000575599 PRR13Q9NZ81 148 aa10.29□□□□□ -0.76
RPAIN-216ENST00000575599 MGAT4CQ9UBM8 478 aa10.29□□□□□ -0.76
RPAIN-216ENST00000575599 MEGF8Q7Z7M0 2845 aa10.29□□□□□ -0.76
RPAIN-216ENST00000575599 NOTCH3Q9UM47 2321 aa10.29□□□□□ -0.76
RPAIN-216ENST00000575599 NOTCH1P46531 2555 aa10.28□□□□□ -0.76
RPAIN-216ENST00000575599 C5orf51A6NDU8 294 aa10.28□□□□□ -0.76
RPAIN-216ENST00000575599 FAM25EA8MYX2 175 aa10.28□□□□□ -0.76
RPAIN-216ENST00000575599 I3L521 148 aa10.28□□□□□ -0.76
RPAIN-216ENST00000575599 GOSR2O14653 212 aa10.28□□□□□ -0.76
RPAIN-216ENST00000575599 RBFOX2O43251 390 aaKnown RBP eCLIP10.28□□□□□ -0.76
RPAIN-216ENST00000575599 HOXB5P09067 269 aa10.28□□□□□ -0.76
RPAIN-216ENST00000575599 BCAP31P51572 246 aa10.28□□□□□ -0.76
RPAIN-216ENST00000575599 AKR1C2P52895 323 aa10.28□□□□□ -0.76
RPAIN-216ENST00000575599 ERVK-16P61578 105 aa10.28□□□□□ -0.76
RPAIN-216ENST00000575599 DEFA5Q01523 94 aa10.28□□□□□ -0.76
RPAIN-216ENST00000575599 PUSL1Q8N0Z8 303 aaKnown RBP10.28□□□□□ -0.76
RPAIN-216ENST00000575599 IL22RA2Q969J5 263 aa10.28□□□□□ -0.76
RPAIN-216ENST00000575599 TMEM56Q96MV1 263 aa10.28□□□□□ -0.76
RPAIN-216ENST00000575599 PDCD10Q9BUL8 212 aa10.28□□□□□ -0.76
RPAIN-216ENST00000575599 SLA2Q9H6Q3 261 aa10.28□□□□□ -0.76
RPAIN-216ENST00000575599 COA4Q9NYJ1 87 aa10.28□□□□□ -0.76
RPAIN-216ENST00000575599 TMEM56-RWDD3S4R434 201 aa10.28□□□□□ -0.76
RPAIN-216ENST00000575599 C13orf42A0A1B0GVH6 325 aa10.27□□□□□ -0.76
RPAIN-216ENST00000575599 DUXBA0A1W2PPF3 345 aa10.27□□□□□ -0.76
RPAIN-216ENST00000575599 HMX3A6NHT5 357 aa10.27□□□□□ -0.76
RPAIN-216ENST00000575599 S1PR2O95136 353 aa10.27□□□□□ -0.76
RPAIN-216ENST00000575599 CDS2O95674 445 aa10.27□□□□□ -0.76
RPAIN-216ENST00000575599 LGALS1P09382 135 aaKnown RBP10.27□□□□□ -0.76
RPAIN-216ENST00000575599 ZNF616Q08AN1 781 aa10.27□□□□□ -0.76
RPAIN-216ENST00000575599 FHL3Q13643 280 aa10.27□□□□□ -0.76
RPAIN-216ENST00000575599 PDLIM3Q53GG5 364 aaPredicted RBP10.27□□□□□ -0.76
RPAIN-216ENST00000575599 OR4A47Q6IF82 309 aa10.27□□□□□ -0.76
RPAIN-216ENST00000575599 GSG1LQ6UXU4 331 aa10.27□□□□□ -0.76
RPAIN-216ENST00000575599 SELENOHQ8IZQ5 122 aaKnown RBP10.27□□□□□ -0.76
RPAIN-216ENST00000575599 CADM3Q8N126 398 aa10.27□□□□□ -0.76
RPAIN-216ENST00000575599 LRTM2Q8N967 370 aa10.27□□□□□ -0.76
RPAIN-216ENST00000575599 OR1N2Q8NGR9 330 aa10.27□□□□□ -0.76
RPAIN-216ENST00000575599 TMEM167AQ8TBQ9 72 aa10.27□□□□□ -0.76
RPAIN-216ENST00000575599 DPF1Q92782 380 aa10.27□□□□□ -0.76
RPAIN-216ENST00000575599 TMEM68Q96MH6 324 aa10.27□□□□□ -0.76
RPAIN-216ENST00000575599 PLEKHA2Q9HB19 425 aa10.27□□□□□ -0.76
RPAIN-216ENST00000575599 TNCP24821 2201 aa10.27□□□□□ -0.77
RPAIN-216ENST00000575599 H3BUA1 57 aa10.26□□□□□ -0.77
RPAIN-216ENST00000575599 PFDN1O60925 122 aa10.26□□□□□ -0.77
RPAIN-216ENST00000575599 KRASP01116 189 aa10.26□□□□□ -0.77
RPAIN-216ENST00000575599 OR8U8P0C7N1 319 aa10.26□□□□□ -0.77
RPAIN-216ENST00000575599 NQO2P16083 231 aa10.26□□□□□ -0.77
RPAIN-216ENST00000575599 HOXD3P31249 432 aaPredicted RBP10.26□□□□□ -0.77
RPAIN-216ENST00000575599 RUNX1Q01196 453 aa10.26□□□□□ -0.77
RPAIN-216ENST00000575599 FCN2Q15485 313 aa10.26□□□□□ -0.77
RPAIN-216ENST00000575599 ZNF585BQ52M93 769 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms