RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 TIGITQ495A1 244 aa11.92□□□□□ -0.5
SMG6-215ENST00000574501 LRRC10Q5BKY1 277 aa11.92□□□□□ -0.5
SMG6-215ENST00000574501 AMMECR1LQ6DCA0 310 aa11.92□□□□□ -0.5
SMG6-215ENST00000574501 TUSC5Q8IXB3 177 aa11.92□□□□□ -0.5
SMG6-215ENST00000574501 ZPBPQ9BS86 351 aa11.92□□□□□ -0.5
SMG6-215ENST00000574501 GCM1Q9NP62 436 aa11.92□□□□□ -0.5
SMG6-215ENST00000574501 ZNF331Q9NQX6 463 aaPredicted RBP11.92□□□□□ -0.5
SMG6-215ENST00000574501 CLEC5AQ9NY25 188 aa11.92□□□□□ -0.5
SMG6-215ENST00000574501 PSG11Q9UQ72 335 aa11.92□□□□□ -0.5
SMG6-215ENST00000574501 TRAV3A0A0B4J244 114 aa11.92□□□□□ -0.5
SMG6-215ENST00000574501 PRSS46E5RG02 174 aa11.92□□□□□ -0.5
SMG6-215ENST00000574501 FCGR3BO75015 233 aa11.92□□□□□ -0.5
SMG6-215ENST00000574501 NUDT3O95989 172 aa11.92□□□□□ -0.5
SMG6-215ENST00000574501 P04436 131 aa11.92□□□□□ -0.5
SMG6-215ENST00000574501 OR10J4P0C629 311 aa11.92□□□□□ -0.5
SMG6-215ENST00000574501 SSTR5P35346 364 aa11.92□□□□□ -0.5
SMG6-215ENST00000574501 RPL8P62917 257 aaKnown RBP11.92□□□□□ -0.5
SMG6-215ENST00000574501 RHOGP84095 191 aa11.92□□□□□ -0.5
SMG6-215ENST00000574501 PRAMEF5Q5TYX0 476 aa11.92□□□□□ -0.5
SMG6-215ENST00000574501 PRAMEF6Q5VXH4 476 aa11.92□□□□□ -0.5
SMG6-215ENST00000574501 SPACA3Q8IXA5 215 aa11.92□□□□□ -0.5
SMG6-215ENST00000574501 SLC24A4Q8NFF2 622 aa11.92□□□□□ -0.5
SMG6-215ENST00000574501 OR8B3Q8NGG8 313 aa11.92□□□□□ -0.5
SMG6-215ENST00000574501 OR4A16Q8NH70 328 aa11.92□□□□□ -0.5
SMG6-215ENST00000574501 OR8B2Q96RD0 313 aa11.92□□□□□ -0.5
SMG6-215ENST00000574501 CSTL1Q9H114 145 aa11.92□□□□□ -0.5
SMG6-215ENST00000574501 OSTCQ9NRP0 149 aa11.92□□□□□ -0.5
SMG6-215ENST00000574501 SMIM27A0A1W2PRY6 76 aa11.91□□□□□ -0.5
SMG6-215ENST00000574501 GRPP07492 148 aa11.91□□□□□ -0.5
SMG6-215ENST00000574501 LINC00869P0C866 280 aa11.91□□□□□ -0.5
SMG6-215ENST00000574501 CA7P43166 264 aa11.91□□□□□ -0.5
SMG6-215ENST00000574501 TBR1Q16650 682 aa11.91□□□□□ -0.5
SMG6-215ENST00000574501 BCL2L2Q92843 193 aaPredicted RBP11.91□□□□□ -0.5
SMG6-215ENST00000574501 HCFC1P51610 2035 aa11.91□□□□□ -0.5
SMG6-215ENST00000574501 LOC102723996A0A087X1L8 192 aa11.91□□□□□ -0.5
SMG6-215ENST00000574501 C2orf70A6NJV1 201 aa11.91□□□□□ -0.5
SMG6-215ENST00000574501 MT-CO3P00414 261 aa11.91□□□□□ -0.5
SMG6-215ENST00000574501 ZC2HC1AQ96GY0 325 aa11.91□□□□□ -0.5
SMG6-215ENST00000574501 SSBP4Q9BWG4 385 aaPredicted RBP11.91□□□□□ -0.5
SMG6-215ENST00000574501 NPVFQ9HCQ7 196 aa11.91□□□□□ -0.5
SMG6-215ENST00000574501 MRPL27Q9P0M9 148 aaKnown RBP11.91□□□□□ -0.5
SMG6-215ENST00000574501 IL19Q9UHD0 177 aa11.91□□□□□ -0.5
SMG6-215ENST00000574501 MUC21A0A0G2JKD1 596 aa11.9□□□□□ -0.5
SMG6-215ENST00000574501 MUC21A0A140T8X8 626 aa11.9□□□□□ -0.5
SMG6-215ENST00000574501 TMEM30CPA0ZSE6 113 aa11.9□□□□□ -0.5
SMG6-215ENST00000574501 GFRA3O60609 400 aa11.9□□□□□ -0.5
SMG6-215ENST00000574501 WISP2O76076 250 aa11.9□□□□□ -0.5
SMG6-215ENST00000574501 HAND1O96004 215 aa11.9□□□□□ -0.5
SMG6-215ENST00000574501 GDF1P27539 372 aa11.9□□□□□ -0.5
SMG6-215ENST00000574501 ERVK11-1P61568 191 aa11.9□□□□□ -0.5
SMG6-215ENST00000574501 PLP2Q04941 152 aa11.9□□□□□ -0.5
SMG6-215ENST00000574501 NRN1LQ496H8 165 aa11.9□□□□□ -0.5
SMG6-215ENST00000574501 COX19Q49B96 90 aa11.9□□□□□ -0.5
SMG6-215ENST00000574501 MUC21Q5SSG8 566 aa11.9□□□□□ -0.5
SMG6-215ENST00000574501 CXorf67Q86X51 503 aaPredicted RBP11.9□□□□□ -0.5
SMG6-215ENST00000574501 TMEM45BQ96B21 275 aa11.9□□□□□ -0.5
SMG6-215ENST00000574501 CDX2Q99626 313 aaPredicted RBP11.9□□□□□ -0.5
SMG6-215ENST00000574501 TNFRSF19Q9NS68 423 aa11.9□□□□□ -0.5
SMG6-215ENST00000574501 LSM4Q9Y4Z0 139 aaKnown RBP11.9□□□□□ -0.5
SMG6-215ENST00000574501 ARL2-SNX15V9GYD0 113 aa11.9□□□□□ -0.5
SMG6-215ENST00000574501 TET2Q6N021 2002 aaPredicted RBP11.9□□□□□ -0.5
SMG6-215ENST00000574501 TMEM265A0A087WTH1 108 aa11.9□□□□□ -0.5
SMG6-215ENST00000574501 hDV102S1A0JD36 115 aa11.9□□□□□ -0.5
SMG6-215ENST00000574501 SH2D7A6NKC9 451 aaPredicted RBP11.9□□□□□ -0.5
SMG6-215ENST00000574501 C2CD4DB7Z1M9 353 aa11.9□□□□□ -0.5
SMG6-215ENST00000574501 ISLRO14498 428 aa11.9□□□□□ -0.5
SMG6-215ENST00000574501 WNT9BO14905 357 aa11.9□□□□□ -0.5
SMG6-215ENST00000574501 IGLV2-8P01709 118 aa11.9□□□□□ -0.5
SMG6-215ENST00000574501 AREGP15514 252 aa11.9□□□□□ -0.5
SMG6-215ENST00000574501 VDAC2P45880 294 aaPredicted RBP11.9□□□□□ -0.5
SMG6-215ENST00000574501 GDF5OSQ5U4N7 250 aa11.9□□□□□ -0.5
SMG6-215ENST00000574501 FAM216AQ8WUB2 273 aa11.9□□□□□ -0.5
SMG6-215ENST00000574501 HSD17B10Q99714 261 aaKnown RBP11.9□□□□□ -0.5
SMG6-215ENST00000574501 IZUMO1RA6ND01 250 aa11.89□□□□□ -0.51
SMG6-215ENST00000574501 IGFBP2P18065 325 aa11.89□□□□□ -0.51
SMG6-215ENST00000574501 NPY1RP25929 384 aa11.89□□□□□ -0.51
SMG6-215ENST00000574501 FOXF2Q12947 444 aa11.89□□□□□ -0.51
SMG6-215ENST00000574501 ZNF146Q15072 292 aa11.89□□□□□ -0.51
SMG6-215ENST00000574501 TEPPQ6URK8 271 aa11.89□□□□□ -0.51
SMG6-215ENST00000574501 Q6ZR03 302 aa11.89□□□□□ -0.51
SMG6-215ENST00000574501 Q8TCH9 128 aa11.89□□□□□ -0.51
SMG6-215ENST00000574501 RTL8AQ9BWD3 113 aa11.89□□□□□ -0.51
SMG6-215ENST00000574501 PINLYPA6NC86 204 aa11.89□□□□□ -0.51
SMG6-215ENST00000574501 OOEPA6NGQ2 149 aa11.89□□□□□ -0.51
SMG6-215ENST00000574501 OR4C46A6NHA9 309 aa11.89□□□□□ -0.51
SMG6-215ENST00000574501 IGHV3-13P01766 116 aa11.89□□□□□ -0.51
SMG6-215ENST00000574501 IGHV3-7P01780 117 aa11.89□□□□□ -0.51
SMG6-215ENST00000574501 GATA2P23769 480 aaPredicted RBP11.89□□□□□ -0.51
SMG6-215ENST00000574501 MFAP2P55001 183 aa11.89□□□□□ -0.51
SMG6-215ENST00000574501 BVES-AS1Q5T3Y7 98 aa11.89□□□□□ -0.51
SMG6-215ENST00000574501 FAM214BQ7L5A3 538 aa11.89□□□□□ -0.51
SMG6-215ENST00000574501 LINC00479Q96M42 142 aa11.89□□□□□ -0.51
SMG6-215ENST00000574501 GGTLC3B5MD39 225 aa11.88□□□□□ -0.51
SMG6-215ENST00000574501 TMPRSS3P57727 454 aa11.88□□□□□ -0.51
SMG6-215ENST00000574501 ALKBH6Q3KRA9 238 aa11.88□□□□□ -0.51
SMG6-215ENST00000574501 PRR27Q6MZM9 219 aa11.88□□□□□ -0.51
SMG6-215ENST00000574501 OR2T6Q8NHC8 308 aa11.88□□□□□ -0.51
SMG6-215ENST00000574501 CORO2AQ92828 525 aa11.88□□□□□ -0.51
SMG6-215ENST00000574501 POLDIP2Q9Y2S7 368 aa11.88□□□□□ -0.51
SMG6-215ENST00000574501 DOCK10Q96BY6 2186 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms