RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 CLDND2Q8NHS1 167 aa8.55□□□□□ -1.04
USP43-205ENST00000574408 TRAV1-1A0A0B4J248 108 aa8.54□□□□□ -1.04
USP43-205ENST00000574408 RRHO14718 337 aa8.54□□□□□ -1.04
USP43-205ENST00000574408 RPP30P78346 268 aaKnown RBP8.54□□□□□ -1.04
USP43-205ENST00000574408 ZNF833PQ6ZTB9 187 aa8.54□□□□□ -1.04
USP43-205ENST00000574408 PKD1L2Q7Z442 2459 aa8.54□□□□□ -1.04
USP43-205ENST00000574408 ZNF709Q8N972 641 aa8.54□□□□□ -1.04
USP43-205ENST00000574408 PACRGQ96M98 296 aaPredicted RBP8.54□□□□□ -1.04
USP43-205ENST00000574408 MAP1LC3B2A6NCE7 125 aa8.54□□□□□ -1.04
USP43-205ENST00000574408 IGKV1D-33P01593 117 aa8.54□□□□□ -1.04
USP43-205ENST00000574408 IGKV1-33P01594 117 aa8.54□□□□□ -1.04
USP43-205ENST00000574408 HSPE1P61604 102 aaKnown RBP8.54□□□□□ -1.04
USP43-205ENST00000574408 ICAM4Q14773 271 aa8.54□□□□□ -1.04
USP43-205ENST00000574408 FAM210BQ96KR6 192 aa8.54□□□□□ -1.04
USP43-205ENST00000574408 NPCDR1Q9BY65 106 aa8.54□□□□□ -1.04
USP43-205ENST00000574408 MAP1LC3BQ9GZQ8 125 aa8.54□□□□□ -1.04
USP43-205ENST00000574408 SMDT1Q9H4I9 107 aa8.54□□□□□ -1.04
USP43-205ENST00000574408 PRORYQ9H606 182 aa8.54□□□□□ -1.04
USP43-205ENST00000574408 FOXA2Q9Y261 457 aaPredicted RBP8.54□□□□□ -1.04
USP43-205ENST00000574408 TIMM8BQ9Y5J9 83 aaPredicted RBP8.54□□□□□ -1.04
USP43-205ENST00000574408 SRRM4A7MD48 611 aaKnown RBP8.54□□□□□ -1.04
USP43-205ENST00000574408 DLL1O00548 723 aa8.54□□□□□ -1.04
USP43-205ENST00000574408 APOA2P02652 100 aa8.54□□□□□ -1.04
USP43-205ENST00000574408 TRGC1P0CF51 173 aa8.54□□□□□ -1.04
USP43-205ENST00000574408 POU2AF1Q16633 256 aa8.54□□□□□ -1.04
USP43-205ENST00000574408 TMEM155Q4W5P6 130 aa8.54□□□□□ -1.04
USP43-205ENST00000574408 KHDC3LQ587J8 217 aa8.54□□□□□ -1.04
USP43-205ENST00000574408 ZNF506Q5JVG8 444 aa8.54□□□□□ -1.04
USP43-205ENST00000574408 RPP25LQ8N5L8 163 aaKnown RBP8.54□□□□□ -1.04
USP43-205ENST00000574408 MBD3L1Q8WWY6 194 aa8.54□□□□□ -1.04
USP43-205ENST00000574408 ENY2Q9NPA8 101 aa8.54□□□□□ -1.04
USP43-205ENST00000574408 TMEM14BQ9NUH8 114 aa8.54□□□□□ -1.04
USP43-205ENST00000574408 TCAPO15273 167 aa8.53□□□□□ -1.04
USP43-205ENST00000574408 OPN1MWP04001 364 aa8.53□□□□□ -1.04
USP43-205ENST00000574408 OPN1MW2P0DN77 364 aa8.53□□□□□ -1.04
USP43-205ENST00000574408 OPN1MW3P0DN78 364 aa8.53□□□□□ -1.04
USP43-205ENST00000574408 CD1BP29016 333 aa8.53□□□□□ -1.04
USP43-205ENST00000574408 VWC2Q2TAL6 325 aa8.53□□□□□ -1.04
USP43-205ENST00000574408 PDLIM3Q53GG5 364 aaPredicted RBP8.53□□□□□ -1.04
USP43-205ENST00000574408 FFAR4Q5NUL3 377 aa8.53□□□□□ -1.04
USP43-205ENST00000574408 CENPVQ7Z7K6 275 aaPredicted RBP8.53□□□□□ -1.04
USP43-205ENST00000574408 Q8WTZ3 238 aa8.53□□□□□ -1.04
USP43-205ENST00000574408 SLC25A22Q9H936 323 aa8.53□□□□□ -1.04
USP43-205ENST00000574408 SLC39A9Q9NUM3 307 aa8.53□□□□□ -1.04
USP43-205ENST00000574408 J3QR06 171 aa8.53□□□□□ -1.04
USP43-205ENST00000574408 SOD3P08294 240 aa8.53□□□□□ -1.04
USP43-205ENST00000574408 SRP19P09132 144 aaKnown RBP8.53□□□□□ -1.04
USP43-205ENST00000574408 DLX6P56179 175 aa8.53□□□□□ -1.04
USP43-205ENST00000574408 DIAPH2-AS1Q14236 149 aa8.53□□□□□ -1.04
USP43-205ENST00000574408 TMEM170AQ8WVE7 144 aa8.53□□□□□ -1.04
USP43-205ENST00000574408 LHX4Q969G2 390 aa8.53□□□□□ -1.04
USP43-205ENST00000574408 OR51B2Q9Y5P1 312 aa8.53□□□□□ -1.04
USP43-205ENST00000574408 CACNA1AO00555 2505 aa8.53□□□□□ -1.04
USP43-205ENST00000574408 SPINK4O60575 86 aa8.52□□□□□ -1.04
USP43-205ENST00000574408 LY6HO94772 140 aa8.52□□□□□ -1.04
USP43-205ENST00000574408 HARBI1Q96MB7 349 aa8.52□□□□□ -1.04
USP43-205ENST00000574408 TMEM204Q9BSN7 226 aa8.52□□□□□ -1.04
USP43-205ENST00000574408 METTL1Q9UBP6 276 aaKnown RBP8.52□□□□□ -1.04
USP43-205ENST00000574408 PRNDQ9UKY0 176 aa8.52□□□□□ -1.04
USP43-205ENST00000574408 LOC102723971A0A1B0GUV8 181 aa8.52□□□□□ -1.05
USP43-205ENST00000574408 H0YJW9 148 aa8.52□□□□□ -1.05
USP43-205ENST00000574408 UPK2O00526 184 aa8.52□□□□□ -1.05
USP43-205ENST00000574408 UBE2CO00762 179 aa8.52□□□□□ -1.05
USP43-205ENST00000574408 SAA1P0DJI8 122 aaPredicted RBP8.52□□□□□ -1.05
USP43-205ENST00000574408 SFTPCP11686 197 aa8.52□□□□□ -1.05
USP43-205ENST00000574408 MISP3Q96FF7 219 aa8.52□□□□□ -1.05
USP43-205ENST00000574408 PATZ1Q9HBE1 687 aaKnown RBP8.52□□□□□ -1.05
USP43-205ENST00000574408 RALYQ9UKM9 306 aaKnown RBP8.52□□□□□ -1.05
USP43-205ENST00000574408 WDR83OSQ9Y284 106 aa8.52□□□□□ -1.05
USP43-205ENST00000574408 C17orf112F2Z3M2 114 aa8.52□□□□□ -1.05
USP43-205ENST00000574408 HSPB1P04792 205 aaKnown RBP8.52□□□□□ -1.05
USP43-205ENST00000574408 IGHV1-8P0DP01 117 aa8.52□□□□□ -1.05
USP43-205ENST00000574408 BCL2P10415 239 aa8.52□□□□□ -1.05
USP43-205ENST00000574408 NPY1RP25929 384 aa8.52□□□□□ -1.05
USP43-205ENST00000574408 DDTP30046 118 aa8.52□□□□□ -1.05
USP43-205ENST00000574408 SLC24A4Q8NFF2 622 aa8.52□□□□□ -1.05
USP43-205ENST00000574408 OR10G4Q8NGN3 311 aa8.52□□□□□ -1.05
USP43-205ENST00000574408 OR10G9Q8NGN4 311 aa8.52□□□□□ -1.05
USP43-205ENST00000574408 OR10G7Q8NGN6 311 aa8.52□□□□□ -1.05
USP43-205ENST00000574408 OR9G1Q8NH87 305 aa8.52□□□□□ -1.05
USP43-205ENST00000574408 MBP02144 154 aa8.51□□□□□ -1.05
USP43-205ENST00000574408 DEFA4P12838 97 aa8.51□□□□□ -1.05
USP43-205ENST00000574408 CHRNA7P36544 502 aa8.51□□□□□ -1.05
USP43-205ENST00000574408 PPOXP50336 477 aa8.51□□□□□ -1.05
USP43-205ENST00000574408 DLX1P56177 255 aa8.51□□□□□ -1.05
USP43-205ENST00000574408 UBE2G2P60604 165 aa8.51□□□□□ -1.05
USP43-205ENST00000574408 PRB3Q04118 309 aaPredicted RBP8.51□□□□□ -1.05
USP43-205ENST00000574408 PMS2P11Q13670 270 aa8.51□□□□□ -1.05
USP43-205ENST00000574408 TUBA4BQ9H853 241 aa8.51□□□□□ -1.05
USP43-205ENST00000574408 PLEKHA3Q9HB20 300 aa8.51□□□□□ -1.05
USP43-205ENST00000574408 KBTBD11O94819 623 aa8.51□□□□□ -1.05
USP43-205ENST00000574408 CA2P00918 260 aa8.51□□□□□ -1.05
USP43-205ENST00000574408 IGHV2-70P01814 119 aa8.51□□□□□ -1.05
USP43-205ENST00000574408 ZNF25P17030 456 aaPredicted RBP8.51□□□□□ -1.05
USP43-205ENST00000574408 LINC00311Q8N616 119 aa8.51□□□□□ -1.05
USP43-205ENST00000574408 OR5AN1Q8NGI8 311 aa8.51□□□□□ -1.05
USP43-205ENST00000574408 OSR1Q8TAX0 266 aaPredicted RBP8.51□□□□□ -1.05
USP43-205ENST00000574408 TMEM186Q96B77 213 aa8.51□□□□□ -1.05
USP43-205ENST00000574408 TVP23CQ96ET8 276 aa8.51□□□□□ -1.05
USP43-205ENST00000574408 OR5B12Q96R08 314 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 157.2 ms