RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 TXNDC9O14530 226 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 TP53I11O14683 189 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 SYNGR2O43760 224 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 PFDN1O60925 122 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 CDS2O95674 445 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 NPYP01303 97 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 IFNA7P01567 189 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 IGKV1-5P01602 117 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 PRM2P04554 102 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 LGALS1P09382 135 aaKnown RBP1.23□□□□□ -2.21
CHD3-217ENST00000574022 ZNF22P17026 224 aaPredicted RBP1.23□□□□□ -2.21
CHD3-217ENST00000574022 G6PCP35575 357 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 CD200P41217 278 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 GABRA4P48169 554 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 ATP5G3P48201 142 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 KRTAP10-12P60413 245 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 RAB4BP61018 213 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 RPS11P62280 158 aaKnown RBP eCLIP1.23□□□□□ -2.21
CHD3-217ENST00000574022 LCN6P62502 163 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 CCL20P78556 96 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 ZNF117Q03924 483 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 AKR1C1Q04828 323 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 MOBPQ13875 183 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 FAM229BQ4G0N7 80 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 DNLZQ5SXM8 178 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 LYRM7Q5U5X0 104 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 AADACL3Q5VUY0 350 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 RPL22L1Q6P5R6 122 aaKnown RBP1.23□□□□□ -2.21
CHD3-217ENST00000574022 Q6Q795 121 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 C2orf91Q6ZV80 131 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 SH2D6Q7Z4S9 175 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 PHF13Q86YI8 300 aaPredicted RBP1.23□□□□□ -2.21
CHD3-217ENST00000574022 OR10P1Q8NGE3 313 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 CLDND2Q8NHS1 167 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 ZNF675Q8TD23 568 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 H1FXQ92522 213 aaKnown RBP1.23□□□□□ -2.21
CHD3-217ENST00000574022 CAPZA3Q96KX2 299 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 TTTY13Q9BZ97 58 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 SH3BGRL3Q9H299 93 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 C16orf95Q9H693 158 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 CYTL1Q9NRR1 136 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 TP73-AS1Q9UF72 201 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 HEY1Q9Y5J3 304 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 PCM1Q15154 2024 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 FMN1Q68DA7 1419 aa1.23□□□□□ -2.21
CHD3-217ENST00000574022 ZCCHC11Q5TAX3 1644 aaKnown RBP1.22□□□□□ -2.21
CHD3-217ENST00000574022 DSCAMO60469 2012 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 MAST2Q6P0Q8 1798 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 TP53BP1Q12888 1972 aaPredicted RBP1.22□□□□□ -2.21
CHD3-217ENST00000574022 ZNF638Q14966 1978 aaKnown RBP1.22□□□□□ -2.21
CHD3-217ENST00000574022 TRAV38-1A0A0B4J264 116 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 FUOMA2VDF0 154 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 MAP1LC3B2A6NCE7 125 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 GGT3PA6NGU5 568 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 SIGLEC16A6NMB1 481 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 C17orf98A8MV24 154 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 LEPROTO15243 131 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 PSCAO43653 123 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 BANF1O75531 89 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 IFNA14P01570 189 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 APOA2P02652 100 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 C1QAP02745 245 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 NBEAP1P0C6P0 100 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 GZMBP10144 247 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 HLA-DMBP28068 263 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 S100GP29377 79 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 CASP1P29466 404 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 CA5AP35218 305 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 XCL1P47992 114 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 PIGPP57054 158 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 FXYD7P58549 80 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 LINC00315P59091 139 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 HIST1H4AP62805 103 aaKnown RBP1.22□□□□□ -2.21
CHD3-217ENST00000574022 MEF2BQ02080 365 aaPredicted RBP1.22□□□□□ -2.21
CHD3-217ENST00000574022 EIF4EBP2Q13542 120 aaPredicted RBP1.22□□□□□ -2.21
CHD3-217ENST00000574022 ZNF141Q15928 474 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 KRTAP25-1Q3LHN0 102 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 SPANXN3Q5MJ09 141 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 TMEM78Q5T7P6 136 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 AMMECR1LQ6DCA0 310 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 DCUN1D2Q6PH85 259 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 LYPD6Q86Y78 171 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 FAM24BQ8N5W8 94 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 OR13D1Q8NGV5 346 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 GRPEL2Q8TAA5 225 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 SMCR5Q8TEV8 140 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 FGF13Q92913 245 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 MALSU1Q96EH3 234 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 C2orf50Q96LR7 162 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 OR8B2Q96RD0 313 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 LYSMD1Q96S90 227 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 SERPINI1Q99574 410 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 DERL1Q9BUN8 251 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 MAP1LC3BQ9GZQ8 125 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 CHST6Q9GZX3 395 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 MYH3P11055 1940 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 UHRF1BP1Q6BDS2 1440 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 ECM29Q5VYK3 1845 aa1.22□□□□□ -2.21
CHD3-217ENST00000574022 SCN10AQ9Y5Y9 1956 aa1.21□□□□□ -2.22
CHD3-217ENST00000574022 ADGRL1O94910 1474 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms