RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 LGALS9O00182 355 aa13.11□□□□□ -0.31
SMG6-212ENST00000573153 IGHV4-30-4P0DP06 118 aa13.11□□□□□ -0.31
SMG6-212ENST00000573153 RPL5P46777 297 aaKnown RBP13.11□□□□□ -0.31
SMG6-212ENST00000573153 PHLDA2Q53GA4 152 aa13.11□□□□□ -0.31
SMG6-212ENST00000573153 RNASE10Q5GAN6 216 aaKnown RBP13.11□□□□□ -0.31
SMG6-212ENST00000573153 TBC1D26Q86UD7 250 aa13.11□□□□□ -0.31
SMG6-212ENST00000573153 LAX1Q8IWV1 398 aa13.11□□□□□ -0.31
SMG6-212ENST00000573153 OR1L8Q8NGR8 309 aa13.11□□□□□ -0.31
SMG6-212ENST00000573153 OR2K2Q8NGT1 345 aa13.11□□□□□ -0.31
SMG6-212ENST00000573153 RABL2AQ9UBK7 228 aaPredicted RBP13.11□□□□□ -0.31
SMG6-212ENST00000573153 RABL2BQ9UNT1 228 aa13.11□□□□□ -0.31
SMG6-212ENST00000573153 TRBV7-1A0A0A6YYK4 115 aa13.1□□□□□ -0.31
SMG6-212ENST00000573153 H0Y980 276 aa13.1□□□□□ -0.31
SMG6-212ENST00000573153 CTDSP2O14595 271 aa13.1□□□□□ -0.31
SMG6-212ENST00000573153 GGCTO75223 188 aaKnown RBP13.1□□□□□ -0.31
SMG6-212ENST00000573153 KRASP01116 189 aa13.1□□□□□ -0.31
SMG6-212ENST00000573153 HLA-AP01891 365 aaKnown RBP13.1□□□□□ -0.31
SMG6-212ENST00000573153 CD3DP04234 171 aa13.1□□□□□ -0.31
SMG6-212ENST00000573153 REG1AP05451 166 aa13.1□□□□□ -0.31
SMG6-212ENST00000573153 TRAPPC2P0DI81 140 aa13.1□□□□□ -0.31
SMG6-212ENST00000573153 TRAPPC2BP0DI82 140 aa13.1□□□□□ -0.31
SMG6-212ENST00000573153 GPHB5Q86YW7 130 aa13.1□□□□□ -0.31
SMG6-212ENST00000573153 GDPD1Q8N9F7 314 aa13.1□□□□□ -0.31
SMG6-212ENST00000573153 TMEM229BQ8NBD8 167 aa13.1□□□□□ -0.31
SMG6-212ENST00000573153 EEF1AKMT3Q96AZ1 226 aa13.1□□□□□ -0.31
SMG6-212ENST00000573153 ZNF414Q96IQ9 312 aa13.1□□□□□ -0.31
SMG6-212ENST00000573153 SEC22AQ96IW7 307 aa13.1□□□□□ -0.31
SMG6-212ENST00000573153 CXorf58Q96LI9 332 aa13.1□□□□□ -0.31
SMG6-212ENST00000573153 TSC22D3Q99576 134 aa13.1□□□□□ -0.31
SMG6-212ENST00000573153 TM2D3Q9BRN9 247 aa13.1□□□□□ -0.31
SMG6-212ENST00000573153 TMEM14BQ9NUH8 114 aa13.1□□□□□ -0.31
SMG6-212ENST00000573153 FKBP11Q9NYL4 201 aa13.1□□□□□ -0.31
SMG6-212ENST00000573153 PRNDQ9UKY0 176 aa13.1□□□□□ -0.31
SMG6-212ENST00000573153 S4R3C0 116 aa13.1□□□□□ -0.31
SMG6-212ENST00000573153 MFSD2BA6NFX1 497 aa13.09□□□□□ -0.31
SMG6-212ENST00000573153 CTDSPLO15194 276 aa13.09□□□□□ -0.31
SMG6-212ENST00000573153 IFNA6P05013 189 aa13.09□□□□□ -0.31
SMG6-212ENST00000573153 SERPINE2P07093 398 aa13.09□□□□□ -0.31
SMG6-212ENST00000573153 DEFA4P12838 97 aa13.09□□□□□ -0.31
SMG6-212ENST00000573153 G6PCP35575 357 aa13.09□□□□□ -0.31
SMG6-212ENST00000573153 WT1-ASQ06250 92 aa13.09□□□□□ -0.31
SMG6-212ENST00000573153 OR5B3Q8NH48 314 aa13.09□□□□□ -0.31
SMG6-212ENST00000573153 LSM10Q969L4 123 aaKnown RBP13.09□□□□□ -0.31
SMG6-212ENST00000573153 THYN1Q9P016 225 aa13.09□□□□□ -0.31
SMG6-212ENST00000573153 CSMD3Q7Z407 3707 aa13.08□□□□□ -0.32
SMG6-212ENST00000573153 C15orf61A6NNL5 157 aa13.08□□□□□ -0.32
SMG6-212ENST00000573153 RGS5O15539 181 aa13.08□□□□□ -0.32
SMG6-212ENST00000573153 SNAPC5O75971 98 aa13.08□□□□□ -0.32
SMG6-212ENST00000573153 IGKV1-39P01597 117 aa13.08□□□□□ -0.32
SMG6-212ENST00000573153 IGHV3-23P01764 117 aa13.08□□□□□ -0.32
SMG6-212ENST00000573153 IGKV1D-39P04432 117 aa13.08□□□□□ -0.32
SMG6-212ENST00000573153 RPA2P15927 270 aa13.08□□□□□ -0.32
SMG6-212ENST00000573153 TAS2R19P59542 299 aa13.08□□□□□ -0.32
SMG6-212ENST00000573153 LCN12Q6JVE5 192 aa13.08□□□□□ -0.32
SMG6-212ENST00000573153 Q8N402 240 aa13.08□□□□□ -0.32
SMG6-212ENST00000573153 OR10W1Q8NGF6 305 aa13.08□□□□□ -0.32
SMG6-212ENST00000573153 ZNF502Q8TBZ5 544 aa13.08□□□□□ -0.32
SMG6-212ENST00000573153 VN1R17PQ8TDU5 208 aa13.08□□□□□ -0.32
SMG6-212ENST00000573153 SMIM4Q8WVI0 70 aa13.08□□□□□ -0.32
SMG6-212ENST00000573153 RCHY1Q96PM5 261 aa13.08□□□□□ -0.32
SMG6-212ENST00000573153 ATP6V0BQ99437 205 aa13.08□□□□□ -0.32
SMG6-212ENST00000573153 OR51B2Q9Y5P1 312 aa13.08□□□□□ -0.32
SMG6-212ENST00000573153 DBX1A6NMT0 343 aa13.07□□□□□ -0.32
SMG6-212ENST00000573153 ZNF785A8K8V0 405 aa13.07□□□□□ -0.32
SMG6-212ENST00000573153 A8MWP6 167 aa13.07□□□□□ -0.32
SMG6-212ENST00000573153 CYB5BO43169 146 aa13.07□□□□□ -0.32
SMG6-212ENST00000573153 OR13C7P0DN81 318 aa13.07□□□□□ -0.32
SMG6-212ENST00000573153 ARL3P36405 182 aa13.07□□□□□ -0.32
SMG6-212ENST00000573153 MFAP2P55001 183 aa13.07□□□□□ -0.32
SMG6-212ENST00000573153 RNASE12Q5GAN4 147 aaKnown RBP13.07□□□□□ -0.32
SMG6-212ENST00000573153 CLEC19AQ6UXS0 136 aa13.07□□□□□ -0.32
SMG6-212ENST00000573153 LINC00322Q6ZN03 302 aaPredicted RBP13.07□□□□□ -0.32
SMG6-212ENST00000573153 OR4D10Q8NGI6 311 aa13.07□□□□□ -0.32
SMG6-212ENST00000573153 TERB2Q8NHR7 220 aa13.07□□□□□ -0.32
SMG6-212ENST00000573153 SLIRPQ9GZT3 109 aaKnown RBP13.07□□□□□ -0.32
SMG6-212ENST00000573153 ZC4H2Q9NQZ6 224 aa13.07□□□□□ -0.32
SMG6-212ENST00000573153 TMEM213A2RRL7 107 aa13.06□□□□□ -0.32
SMG6-212ENST00000573153 C2orf70A6NJV1 201 aa13.06□□□□□ -0.32
SMG6-212ENST00000573153 H3BMQ9 156 aa13.06□□□□□ -0.32
SMG6-212ENST00000573153 OR2C1O95371 312 aa13.06□□□□□ -0.32
SMG6-212ENST00000573153 P0C879 139 aa13.06□□□□□ -0.32
SMG6-212ENST00000573153 CD300EQ496F6 205 aaPredicted RBP13.06□□□□□ -0.32
SMG6-212ENST00000573153 STEAP1BQ6NZ63 245 aa13.06□□□□□ -0.32
SMG6-212ENST00000573153 ISOC1Q96CN7 298 aa13.06□□□□□ -0.32
SMG6-212ENST00000573153 NSG2Q9Y328 171 aa13.06□□□□□ -0.32
SMG6-212ENST00000573153 F11RQ9Y624 299 aaKnown RBP13.06□□□□□ -0.32
SMG6-212ENST00000573153 F8W735 103 aaPredicted RBP13.05□□□□□ -0.32
SMG6-212ENST00000573153 B3GALNT1O75752 331 aa13.05□□□□□ -0.32
SMG6-212ENST00000573153 RAB3DO95716 219 aa13.05□□□□□ -0.32
SMG6-212ENST00000573153 PIGPP57054 158 aa13.05□□□□□ -0.32
SMG6-212ENST00000573153 MEF2DQ14814 521 aa13.05□□□□□ -0.32
SMG6-212ENST00000573153 DEFB114Q30KQ6 69 aa13.05□□□□□ -0.32
SMG6-212ENST00000573153 OR1L6Q8NGR2 347 aa13.05□□□□□ -0.32
SMG6-212ENST00000573153 ZFAND1Q8TCF1 268 aa13.05□□□□□ -0.32
SMG6-212ENST00000573153 CACNG8Q8WXS5 425 aa13.05□□□□□ -0.32
SMG6-212ENST00000573153 MRGPRFQ96AM1 343 aa13.05□□□□□ -0.32
SMG6-212ENST00000573153 DIRAS2Q96HU8 199 aa13.05□□□□□ -0.32
SMG6-212ENST00000573153 TMEM56Q96MV1 263 aa13.05□□□□□ -0.32
SMG6-212ENST00000573153 SOSTQ9BQB4 213 aa13.05□□□□□ -0.32
SMG6-212ENST00000573153 NXF2Q9GZY0 626 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms