RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 BBIP1A8MTZ0 92 aa3.66□□□□□ -1.82
TOPBP1-210ENST00000572787 KRTAP16-1A8MUX0 517 aa3.66□□□□□ -1.82
TOPBP1-210ENST00000572787 H0YJW9 148 aa3.66□□□□□ -1.82
TOPBP1-210ENST00000572787 TAX1BP3O14907 124 aa3.66□□□□□ -1.82
TOPBP1-210ENST00000572787 ZNF73O43830 326 aaPredicted RBP3.66□□□□□ -1.82
TOPBP1-210ENST00000572787 PGLYRP1O75594 196 aaPredicted RBP3.66□□□□□ -1.82
TOPBP1-210ENST00000572787 NUDT2P50583 147 aa3.66□□□□□ -1.82
TOPBP1-210ENST00000572787 RBM11P57052 281 aaKnown RBP3.66□□□□□ -1.82
TOPBP1-210ENST00000572787 RHOGP84095 191 aa3.66□□□□□ -1.82
TOPBP1-210ENST00000572787 ATP5G2Q06055 141 aa3.66□□□□□ -1.82
TOPBP1-210ENST00000572787 KRTAP27-1Q3LI81 207 aa3.66□□□□□ -1.82
TOPBP1-210ENST00000572787 SCXQ7RTU7 201 aa3.66□□□□□ -1.82
TOPBP1-210ENST00000572787 CAMK2N1Q7Z7J9 78 aa3.66□□□□□ -1.82
TOPBP1-210ENST00000572787 NR2C2APQ86WQ0 139 aa3.66□□□□□ -1.82
TOPBP1-210ENST00000572787 C10orf126Q8N4M7 172 aa3.66□□□□□ -1.82
TOPBP1-210ENST00000572787 OR2T10Q8NGZ9 312 aa3.66□□□□□ -1.82
TOPBP1-210ENST00000572787 RMI2Q96E14 147 aa3.66□□□□□ -1.82
TOPBP1-210ENST00000572787 OR4C12Q96R67 309 aa3.66□□□□□ -1.82
TOPBP1-210ENST00000572787 MRPL57Q9BQC6 102 aaKnown RBP3.66□□□□□ -1.82
TOPBP1-210ENST00000572787 SPANXDQ9BXN6 97 aa3.66□□□□□ -1.82
TOPBP1-210ENST00000572787 TMEM133Q9H2Q1 129 aa3.66□□□□□ -1.82
TOPBP1-210ENST00000572787 C6orf106Q9H6K1 298 aaPredicted RBP3.66□□□□□ -1.82
TOPBP1-210ENST00000572787 LHX9Q9NQ69 397 aa3.66□□□□□ -1.82
TOPBP1-210ENST00000572787 CBLN4Q9NTU7 201 aa3.66□□□□□ -1.82
TOPBP1-210ENST00000572787 CCDC167Q9P0B6 97 aa3.66□□□□□ -1.82
TOPBP1-210ENST00000572787 CACNG5Q9UF02 275 aa3.66□□□□□ -1.82
TOPBP1-210ENST00000572787 V9GYS6 101 aa3.66□□□□□ -1.82
TOPBP1-210ENST00000572787 ADAMTS13Q76LX8 1427 aa3.66□□□□□ -1.82
TOPBP1-210ENST00000572787 MED14O60244 1454 aa3.66□□□□□ -1.82
TOPBP1-210ENST00000572787 DOCK5Q9H7D0 1870 aa3.65□□□□□ -1.82
TOPBP1-210ENST00000572787 MYOM3Q5VTT5 1437 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 IGLV1-50A0A075B6I6 118 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 IGHV1OR15-9A0A0B4J2B8 117 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 LOC100130705A0A1B0GUX0 176 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 ZNF670-ZNF695F2Z2N8 137 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 PLA2G10O15496 165 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 SNAPC5O75971 98 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 CST7O76096 145 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 SLC25A14O95258 325 aaPredicted RBP3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 IGHV3-11P01762 117 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 AMBPP02760 352 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 MAS1P04201 325 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 SEC11BP0C7V7 166 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 CRISP2P16562 243 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 CRYGSP22914 178 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 HIST1H2BOP23527 126 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 HIST1H2BBP33778 126 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 INSL3P51460 131 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 HIST1H2BDP58876 126 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 FGF12P61328 243 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 HIST1H2BCP62807 126 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 GNB1P62873 340 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 MEF2BQ02080 365 aaPredicted RBP3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 FHL2Q14192 279 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 ZNF141Q15928 474 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 HIST2H2BEQ16778 126 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 PABPC1L2AQ5JQF8 200 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 RPL22L1Q6P5R6 122 aaKnown RBP3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 OR4K5Q8NGD3 323 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 LMO3Q8TAP4 145 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 C15orf40Q8WUR7 153 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 H1FXQ92522 213 aaKnown RBP3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 HIST1H2BHQ93079 126 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 RPL36ALQ969Q0 106 aaKnown RBP3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 VSIG2Q96IQ7 327 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 HIST1H2BNQ99877 126 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 HIST1H2BMQ99879 126 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 TMEM204Q9BSN7 226 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 C1QTNF6Q9BXI9 259 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 Q9H521 79 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 HEXA-AS1Q9H8Q6 139 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 SND1-IT1Q9HBX3 110 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 FGF22Q9HCT0 170 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 ZFYVE16Q7Z3T8 1539 aa3.65□□□□□ -1.83
TOPBP1-210ENST00000572787 TROQ12816 1431 aaPredicted RBP3.64□□□□□ -1.83
TOPBP1-210ENST00000572787 TRAPPC8Q9Y2L5 1435 aa3.64□□□□□ -1.83
TOPBP1-210ENST00000572787 IGHV1-58A0A0C4DH39 117 aa3.64□□□□□ -1.83
TOPBP1-210ENST00000572787 SOCS3O14543 225 aa3.64□□□□□ -1.83
TOPBP1-210ENST00000572787 CDC42EP2O14613 210 aa3.64□□□□□ -1.83
TOPBP1-210ENST00000572787 IGLV2-23P01705 113 aa3.64□□□□□ -1.83
TOPBP1-210ENST00000572787 PATE4P0C8F1 98 aa3.64□□□□□ -1.83
TOPBP1-210ENST00000572787 ZNF823P16415 610 aa3.64□□□□□ -1.83
TOPBP1-210ENST00000572787 LGALS3P17931 250 aaKnown RBP3.64□□□□□ -1.83
TOPBP1-210ENST00000572787 ELK1P19419 428 aa3.64□□□□□ -1.83
TOPBP1-210ENST00000572787 PSMB8P28062 276 aa3.64□□□□□ -1.83
TOPBP1-210ENST00000572787 S100A2P29034 98 aa3.64□□□□□ -1.83
TOPBP1-210ENST00000572787 CCL20P78556 96 aa3.64□□□□□ -1.83
TOPBP1-210ENST00000572787 PDGFRLQ15198 375 aa3.64□□□□□ -1.83
TOPBP1-210ENST00000572787 TMEM183BQ1AE95 376 aa3.64□□□□□ -1.83
TOPBP1-210ENST00000572787 SPANXN3Q5MJ09 141 aa3.64□□□□□ -1.83
TOPBP1-210ENST00000572787 LAIR2Q6ISS4 152 aa3.64□□□□□ -1.83
TOPBP1-210ENST00000572787 ZNF767PQ75MW2 155 aa3.64□□□□□ -1.83
TOPBP1-210ENST00000572787 TRAPPC6BQ86SZ2 158 aa3.64□□□□□ -1.83
TOPBP1-210ENST00000572787 GPHB5Q86YW7 130 aa3.64□□□□□ -1.83
TOPBP1-210ENST00000572787 TMEM183AQ8IXX5 376 aa3.64□□□□□ -1.83
TOPBP1-210ENST00000572787 ORMDL3Q8N138 153 aa3.64□□□□□ -1.83
TOPBP1-210ENST00000572787 C2orf15Q8WU43 125 aaKnown RBP3.64□□□□□ -1.83
TOPBP1-210ENST00000572787 ZNF799Q96GE5 643 aa3.64□□□□□ -1.83
TOPBP1-210ENST00000572787 KRTAP3-1Q9BYR8 98 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms