RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 ELANEP08246 267 aa17.22■□□□□ 0.35
RAB40B-207ENST00000572603 AREGP15514 252 aa17.22■□□□□ 0.35
RAB40B-207ENST00000572603 ZNF429Q86V71 674 aa17.22■□□□□ 0.35
RAB40B-207ENST00000572603 OR5M8Q8NGP6 311 aa17.22■□□□□ 0.35
RAB40B-207ENST00000572603 OR1L8Q8NGR8 309 aa17.22■□□□□ 0.35
RAB40B-207ENST00000572603 OR5B3Q8NH48 314 aa17.22■□□□□ 0.35
RAB40B-207ENST00000572603 OR4A16Q8NH70 328 aa17.22■□□□□ 0.35
RAB40B-207ENST00000572603 SEC22CQ9BRL7 303 aa17.22■□□□□ 0.35
RAB40B-207ENST00000572603 KLK15Q9H2R5 256 aa17.22■□□□□ 0.35
RAB40B-207ENST00000572603 NDUFA4L2Q9NRX3 87 aa17.22■□□□□ 0.35
RAB40B-207ENST00000572603 CACNG5Q9UF02 275 aa17.22■□□□□ 0.35
RAB40B-207ENST00000572603 ZNF257Q9Y2Q1 563 aa17.22■□□□□ 0.35
RAB40B-207ENST00000572603 TRRAPQ9Y4A5 3859 aa17.22■□□□□ 0.35
RAB40B-207ENST00000572603 CMYA5Q8N3K9 4069 aa17.21■□□□□ 0.35
RAB40B-207ENST00000572603 RPLP1P05386 114 aaKnown RBP17.21■□□□□ 0.35
RAB40B-207ENST00000572603 C19orf35Q6ZS72 473 aa17.21■□□□□ 0.35
RAB40B-207ENST00000572603 OR5T1Q8NG75 326 aa17.21■□□□□ 0.35
RAB40B-207ENST00000572603 SRSF8Q9BRL6 282 aaKnown RBP17.21■□□□□ 0.35
RAB40B-207ENST00000572603 FKBP11Q9NYL4 201 aa17.21■□□□□ 0.35
RAB40B-207ENST00000572603 VWFP04275 2813 aa17.2■□□□□ 0.34
RAB40B-207ENST00000572603 ST8SIA3O43173 380 aa17.2■□□□□ 0.34
RAB40B-207ENST00000572603 PTTG1O95997 202 aa17.2■□□□□ 0.34
RAB40B-207ENST00000572603 TRAPPC2P0DI81 140 aa17.2■□□□□ 0.34
RAB40B-207ENST00000572603 TRAPPC2BP0DI82 140 aa17.2■□□□□ 0.34
RAB40B-207ENST00000572603 DCTN2Q13561 401 aaKnown RBP17.2■□□□□ 0.34
RAB40B-207ENST00000572603 KIAA0141Q14154 515 aaPredicted RBP17.2■□□□□ 0.34
RAB40B-207ENST00000572603 THOC7Q6I9Y2 204 aaKnown RBP17.2■□□□□ 0.34
RAB40B-207ENST00000572603 PLET1Q6UQ28 207 aa17.2■□□□□ 0.34
RAB40B-207ENST00000572603 TTC9CQ8N5M4 171 aa17.2■□□□□ 0.34
RAB40B-207ENST00000572603 OR10W1Q8NGF6 305 aa17.2■□□□□ 0.34
RAB40B-207ENST00000572603 MITD1Q8WV92 249 aa17.2■□□□□ 0.34
RAB40B-207ENST00000572603 MARVELD1Q9BSK0 173 aa17.2■□□□□ 0.34
RAB40B-207ENST00000572603 NPIPB5A8MRT5 1133 aa17.19■□□□□ 0.34
RAB40B-207ENST00000572603 BRI3O95415 125 aa17.19■□□□□ 0.34
RAB40B-207ENST00000572603 IL5P05113 134 aa17.19■□□□□ 0.34
RAB40B-207ENST00000572603 HSPE1P61604 102 aaKnown RBP17.19■□□□□ 0.34
RAB40B-207ENST00000572603 PRCDQ00LT1 54 aa17.19■□□□□ 0.34
RAB40B-207ENST00000572603 WT1-ASQ06250 92 aa17.19■□□□□ 0.34
RAB40B-207ENST00000572603 CXorf66Q5JRM2 361 aaPredicted RBP17.19■□□□□ 0.34
RAB40B-207ENST00000572603 COQ8AQ8NI60 647 aa17.19■□□□□ 0.34
RAB40B-207ENST00000572603 ZNF431Q8TF32 576 aaPredicted RBP17.19■□□□□ 0.34
RAB40B-207ENST00000572603 PIGBOS1A0A0B4J2F0 54 aa17.18■□□□□ 0.34
RAB40B-207ENST00000572603 TCRBV4S1A1TA0A5B7 111 aa17.18■□□□□ 0.34
RAB40B-207ENST00000572603 H3BUA1 57 aa17.18■□□□□ 0.34
RAB40B-207ENST00000572603 ADAP1O75689 374 aa17.18■□□□□ 0.34
RAB40B-207ENST00000572603 CRYGCP07315 174 aa17.18■□□□□ 0.34
RAB40B-207ENST00000572603 PF4V1P10720 104 aa17.18■□□□□ 0.34
RAB40B-207ENST00000572603 CTRB1P17538 263 aa17.18■□□□□ 0.34
RAB40B-207ENST00000572603 PSMB6P28072 239 aa17.18■□□□□ 0.34
RAB40B-207ENST00000572603 RPL23AP62750 156 aaKnown RBP17.18■□□□□ 0.34
RAB40B-207ENST00000572603 CTRB2Q6GPI1 263 aa17.18■□□□□ 0.34
RAB40B-207ENST00000572603 HINT2Q9BX68 163 aa17.18■□□□□ 0.34
RAB40B-207ENST00000572603 COA4Q9NYJ1 87 aa17.18■□□□□ 0.34
RAB40B-207ENST00000572603 TSSC4Q9Y5U2 329 aaPredicted RBP17.18■□□□□ 0.34
RAB40B-207ENST00000572603 INMT-MINDY4F8WBC2 141 aa17.17■□□□□ 0.34
RAB40B-207ENST00000572603 RBMXL2O75526 392 aaKnown RBP17.17■□□□□ 0.34
RAB40B-207ENST00000572603 REG1AP05451 166 aa17.17■□□□□ 0.34
RAB40B-207ENST00000572603 HOXB5P09067 269 aa17.17■□□□□ 0.34
RAB40B-207ENST00000572603 SULT1A3P0DMM9 295 aa17.17■□□□□ 0.34
RAB40B-207ENST00000572603 SULT1A4P0DMN0 295 aa17.17■□□□□ 0.34
RAB40B-207ENST00000572603 RAB9AP51151 201 aa17.17■□□□□ 0.34
RAB40B-207ENST00000572603 GGNBP1Q5YKI7 109 aa17.17■□□□□ 0.34
RAB40B-207ENST00000572603 C18orf65Q6ZTR6 163 aa17.17■□□□□ 0.34
RAB40B-207ENST00000572603 NDUFA11Q86Y39 141 aa17.17■□□□□ 0.34
RAB40B-207ENST00000572603 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.17■□□□□ 0.34
RAB40B-207ENST00000572603 TMED3Q9Y3Q3 217 aa17.17■□□□□ 0.34
RAB40B-207ENST00000572603 WNK1Q9H4A3 2382 aa17.17■□□□□ 0.34
RAB40B-207ENST00000572603 PITX3O75364 302 aa17.16■□□□□ 0.34
RAB40B-207ENST00000572603 PRH1P02810 166 aa17.16■□□□□ 0.34
RAB40B-207ENST00000572603 DEFA5Q01523 94 aa17.16■□□□□ 0.34
RAB40B-207ENST00000572603 SMCO1Q147U7 214 aa17.16■□□□□ 0.34
RAB40B-207ENST00000572603 KLK9Q2XQG4 91 aa17.16■□□□□ 0.34
RAB40B-207ENST00000572603 PDLIM3Q53GG5 364 aaPredicted RBP17.16■□□□□ 0.34
RAB40B-207ENST00000572603 SPINK9Q5DT21 86 aa17.16■□□□□ 0.34
RAB40B-207ENST00000572603 HSD17B13Q7Z5P4 300 aaPredicted RBP17.16■□□□□ 0.34
RAB40B-207ENST00000572603 MS4A10Q96PG2 267 aa17.16■□□□□ 0.34
RAB40B-207ENST00000572603 KLK9Q9UKQ9 250 aa17.16■□□□□ 0.34
RAB40B-207ENST00000572603 A0A1B0GU03 582 aa17.15■□□□□ 0.34
RAB40B-207ENST00000572603 MPTX1A8MV57 137 aa17.15■□□□□ 0.34
RAB40B-207ENST00000572603 KHDC1LQ5JSQ8 128 aa17.15■□□□□ 0.34
RAB40B-207ENST00000572603 ZNF491Q8N8L2 437 aa17.15■□□□□ 0.34
RAB40B-207ENST00000572603 OR52E5Q8NH55 327 aa17.15■□□□□ 0.34
RAB40B-207ENST00000572603 FANCD2OSQ96PS1 177 aa17.15■□□□□ 0.34
RAB40B-207ENST00000572603 SLA2Q9H6Q3 261 aa17.15■□□□□ 0.34
RAB40B-207ENST00000572603 ZFP57Q9NU63 452 aa17.15■□□□□ 0.34
RAB40B-207ENST00000572603 DMRT1Q9Y5R6 373 aa17.15■□□□□ 0.34
RAB40B-207ENST00000572603 TRBV9A0A0B4J1U6 114 aa17.14■□□□□ 0.33
RAB40B-207ENST00000572603 A0A1W2PRX2 142 aa17.14■□□□□ 0.33
RAB40B-207ENST00000572603 INS-IGF2F8WCM5 200 aa17.14■□□□□ 0.33
RAB40B-207ENST00000572603 PRAF2O60831 178 aa17.14■□□□□ 0.33
RAB40B-207ENST00000572603 TRGV3P03979 118 aa17.14■□□□□ 0.33
RAB40B-207ENST00000572603 OR13C7P0DN81 318 aa17.14■□□□□ 0.33
RAB40B-207ENST00000572603 SLC25A6P12236 298 aa17.14■□□□□ 0.33
RAB40B-207ENST00000572603 TPPP2P59282 170 aa17.14■□□□□ 0.33
RAB40B-207ENST00000572603 NSUN5P1Q3KNT7 163 aa17.14■□□□□ 0.33
RAB40B-207ENST00000572603 TMEM65Q6PI78 240 aa17.14■□□□□ 0.33
RAB40B-207ENST00000572603 GNB4Q9HAV0 340 aa17.14■□□□□ 0.33
RAB40B-207ENST00000572603 PLEKHA3Q9HB20 300 aa17.14■□□□□ 0.33
RAB40B-207ENST00000572603 NXPH3O95157 252 aa17.13■□□□□ 0.33
RAB40B-207ENST00000572603 IFNA17P01571 189 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms