RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 MOSP00540 346 aa4.92□□□□□ -1.62
CYLD-216ENST00000569891 IGHV3-7P01780 117 aa4.92□□□□□ -1.62
CYLD-216ENST00000569891 CDC34P49427 236 aaPredicted RBP4.92□□□□□ -1.62
CYLD-216ENST00000569891 ZNF134P52741 427 aa4.92□□□□□ -1.62
CYLD-216ENST00000569891 DLX6P56179 175 aa4.92□□□□□ -1.62
CYLD-216ENST00000569891 STXBP6Q8NFX7 210 aa4.92□□□□□ -1.62
CYLD-216ENST00000569891 OR10G4Q8NGN3 311 aa4.92□□□□□ -1.62
CYLD-216ENST00000569891 OR10G9Q8NGN4 311 aa4.92□□□□□ -1.62
CYLD-216ENST00000569891 OR10G7Q8NGN6 311 aa4.92□□□□□ -1.62
CYLD-216ENST00000569891 TMEM68Q96MH6 324 aa4.92□□□□□ -1.62
CYLD-216ENST00000569891 WDR83OSQ9Y284 106 aa4.92□□□□□ -1.62
CYLD-216ENST00000569891 SETXQ7Z333 2677 aaKnown RBP4.91□□□□□ -1.62
CYLD-216ENST00000569891 IGHV1-3A0A0C4DH29 117 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 MAP1LC3B2A6NCE7 125 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 TOX4O94842 621 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 HSPB1P04792 205 aaKnown RBP4.91□□□□□ -1.62
CYLD-216ENST00000569891 FBP1P09467 338 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 FAM157CP0CG43 387 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 C5orf24Q7Z6I8 188 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 CENPVQ7Z7K6 275 aaPredicted RBP4.91□□□□□ -1.62
CYLD-216ENST00000569891 IQCF2Q8IXL9 164 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 MALSU1Q96EH3 234 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 MAP1LC3BQ9GZQ8 125 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 DCAF16Q9NXF7 216 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 SLC45A2Q9UMX9 530 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 CADP27708 2225 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 KIAA2026Q5HYC2 2103 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 PIEZO1Q92508 2521 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 MEX3AA1L020 520 aaKnown RBP4.91□□□□□ -1.62
CYLD-216ENST00000569891 RBFOX3A6NFN3 312 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 IGHV2-5P01817 119 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 CDKN1AP38936 164 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 UQCRFS1P47985 274 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 ARF6P62330 175 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 PNRC1Q12796 327 aaPredicted RBP4.91□□□□□ -1.62
CYLD-216ENST00000569891 PMS2P11Q13670 270 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 VWC2Q2TAL6 325 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 TCF23Q7RTU1 214 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 MBD3L1Q8WWY6 194 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 TMEM167BQ9NRX6 74 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 IGHV2-70DA0A0C4DH43 119 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 KIAA1324LA8MWY0 1029 aaPredicted RBP4.91□□□□□ -1.62
CYLD-216ENST00000569891 HIST1H1BP16401 226 aaKnown RBP4.91□□□□□ -1.62
CYLD-216ENST00000569891 RHEBQ15382 184 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 TNXAQ16473 311 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 ZNF841Q6ZN19 808 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 TMEM144Q7Z5S9 345 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 ODF3L1Q8IXM7 274 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 NIPSNAP3BQ9BS92 247 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 MRPL32Q9BYC8 188 aaKnown RBP4.91□□□□□ -1.62
CYLD-216ENST00000569891 METTL1Q9UBP6 276 aaKnown RBP4.91□□□□□ -1.62
CYLD-216ENST00000569891 VAX2Q9UIW0 290 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 TANC2Q9HCD6 1990 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 TRAV30A0A087WSZ9 112 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 SIAH2O43255 324 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 DEFA4P12838 97 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 VDAC2P45880 294 aaPredicted RBP4.91□□□□□ -1.62
CYLD-216ENST00000569891 UBE2E1P51965 193 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 NKX6-2Q9C056 277 aaPredicted RBP4.91□□□□□ -1.62
CYLD-216ENST00000569891 WFDC1Q9HC57 220 aa4.91□□□□□ -1.62
CYLD-216ENST00000569891 CARHSP1Q9Y2V2 147 aaKnown RBP4.91□□□□□ -1.62
CYLD-216ENST00000569891 CACNA1DQ01668 2161 aa4.9□□□□□ -1.62
CYLD-216ENST00000569891 B4DEV8 164 aa4.9□□□□□ -1.62
CYLD-216ENST00000569891 F6UZH7 168 aa4.9□□□□□ -1.62
CYLD-216ENST00000569891 CXorf1O96002 111 aa4.9□□□□□ -1.62
CYLD-216ENST00000569891 IGLV1-47P01700 117 aa4.9□□□□□ -1.62
CYLD-216ENST00000569891 MMDQ15546 238 aa4.9□□□□□ -1.62
CYLD-216ENST00000569891 IZUMO4Q1ZYL8 232 aa4.9□□□□□ -1.62
CYLD-216ENST00000569891 DUX4L9Q6RFH8 374 aaPredicted RBP4.9□□□□□ -1.62
CYLD-216ENST00000569891 BPIFCQ8NFQ6 507 aa4.9□□□□□ -1.62
CYLD-216ENST00000569891 LYPD6BQ8NI32 183 aa4.9□□□□□ -1.62
CYLD-216ENST00000569891 NPCDR1Q9BY65 106 aa4.9□□□□□ -1.62
CYLD-216ENST00000569891 PITPNC1Q9UKF7 332 aa4.9□□□□□ -1.62
CYLD-216ENST00000569891 FAM96BQ9Y3D0 163 aa4.9□□□□□ -1.62
CYLD-216ENST00000569891 PLECQ15149 4684 aaKnown RBP4.9□□□□□ -1.62
CYLD-216ENST00000569891 TRAV20A0A0B4J274 112 aa4.9□□□□□ -1.62
CYLD-216ENST00000569891 TEX50A0A1B0GTY4 177 aa4.9□□□□□ -1.62
CYLD-216ENST00000569891 LYNX1G3V0Z9 82 aa4.9□□□□□ -1.62
CYLD-216ENST00000569891 NBR2O15453 112 aa4.9□□□□□ -1.62
CYLD-216ENST00000569891 KCNAB3O43448 404 aa4.9□□□□□ -1.62
CYLD-216ENST00000569891 SLC25A17O43808 307 aa4.9□□□□□ -1.62
CYLD-216ENST00000569891 LYNX1P0DP58 116 aa4.9□□□□□ -1.62
CYLD-216ENST00000569891 RPL29P47914 159 aaKnown RBP4.9□□□□□ -1.62
CYLD-216ENST00000569891 ELLP55199 621 aaPredicted RBP4.9□□□□□ -1.62
CYLD-216ENST00000569891 PPP1R27Q86WC6 154 aa4.9□□□□□ -1.62
CYLD-216ENST00000569891 PCNPQ8WW12 178 aaKnown RBP4.9□□□□□ -1.62
CYLD-216ENST00000569891 ST6GALNAC6Q969X2 333 aa4.9□□□□□ -1.62
CYLD-216ENST00000569891 CYYR1Q96J86 154 aa4.9□□□□□ -1.62
CYLD-216ENST00000569891 BEX4Q9NWD9 120 aaPredicted RBP4.9□□□□□ -1.62
CYLD-216ENST00000569891 M0R036 132 aa4.9□□□□□ -1.63
CYLD-216ENST00000569891 AGPAT2O15120 278 aa4.9□□□□□ -1.63
CYLD-216ENST00000569891 REG1BP48304 166 aa4.9□□□□□ -1.63
CYLD-216ENST00000569891 PRSS8Q16651 343 aa4.9□□□□□ -1.63
CYLD-216ENST00000569891 TMEM249Q2WGJ8 235 aa4.9□□□□□ -1.63
CYLD-216ENST00000569891 OR4P4Q8NGL7 312 aa4.9□□□□□ -1.63
CYLD-216ENST00000569891 RPUSD4Q96CM3 377 aaKnown RBP4.9□□□□□ -1.63
CYLD-216ENST00000569891 C5orf30Q96GV9 206 aa4.9□□□□□ -1.63
CYLD-216ENST00000569891 RASL11BQ9BPW5 248 aa4.9□□□□□ -1.63
CYLD-216ENST00000569891 TECRQ9NZ01 308 aaKnown RBP4.9□□□□□ -1.63
CYLD-216ENST00000569891 ARL2-SNX15V9GYD0 113 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms