RNA–Protein interactions for RNA: ENST00000569374.1

CCDC113-205, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-205ENST00000569374 NRIP2Q9BQI9 281 aa6.37□□□□□ -1.39
CCDC113-205ENST00000569374 HDHD3Q9BSH5 251 aaPredicted RBP6.37□□□□□ -1.39
CCDC113-205ENST00000569374 SMCO4Q9NRQ5 59 aa6.37□□□□□ -1.39
CCDC113-205ENST00000569374 TAAR3PQ9P1P4 343 aa6.37□□□□□ -1.39
CCDC113-205ENST00000569374 MLXQ9UH92 298 aa6.37□□□□□ -1.39
CCDC113-205ENST00000569374 PRELID1Q9Y255 219 aa6.37□□□□□ -1.39
CCDC113-205ENST00000569374 IGLV3-9A0A075B6K5 115 aa6.36□□□□□ -1.39
CCDC113-205ENST00000569374 IGHV3-64DA0A0J9YX35 117 aa6.36□□□□□ -1.39
CCDC113-205ENST00000569374 A0A1W2PN81 502 aa6.36□□□□□ -1.39
CCDC113-205ENST00000569374 J3QT63 122 aa6.36□□□□□ -1.39
CCDC113-205ENST00000569374 SH2D1BO14796 132 aa6.36□□□□□ -1.39
CCDC113-205ENST00000569374 PITX3O75364 302 aa6.36□□□□□ -1.39
CCDC113-205ENST00000569374 IGHV1-46P01743 117 aa6.36□□□□□ -1.39
CCDC113-205ENST00000569374 HBE1P02100 147 aa6.36□□□□□ -1.39
CCDC113-205ENST00000569374 SERPINE2P07093 398 aa6.36□□□□□ -1.39
CCDC113-205ENST00000569374 PRKACAP17612 351 aa6.36□□□□□ -1.39
CCDC113-205ENST00000569374 BCL3P20749 454 aa6.36□□□□□ -1.39
CCDC113-205ENST00000569374 GNRHRP30968 328 aa6.36□□□□□ -1.39
CCDC113-205ENST00000569374 GLRXP35754 106 aa6.36□□□□□ -1.39
CCDC113-205ENST00000569374 CHRNA7P36544 502 aa6.36□□□□□ -1.39
CCDC113-205ENST00000569374 DSCR9P59020 149 aa6.36□□□□□ -1.39
CCDC113-205ENST00000569374 RPL23AP62750 156 aaKnown RBP6.36□□□□□ -1.39
CCDC113-205ENST00000569374 RPL24P83731 157 aaKnown RBP6.36□□□□□ -1.39
CCDC113-205ENST00000569374 MSMO1Q15800 293 aa6.36□□□□□ -1.39
CCDC113-205ENST00000569374 GUCA2BQ16661 112 aa6.36□□□□□ -1.39
CCDC113-205ENST00000569374 SMUG1Q53HV7 270 aa6.36□□□□□ -1.39
CCDC113-205ENST00000569374 Q6ZR03 302 aa6.36□□□□□ -1.39
CCDC113-205ENST00000569374 Q6ZRG5 221 aa6.36□□□□□ -1.39
CCDC113-205ENST00000569374 LYZL2Q7Z4W2 148 aa6.36□□□□□ -1.39
CCDC113-205ENST00000569374 RTN4RL2Q86UN3 420 aa6.36□□□□□ -1.39
CCDC113-205ENST00000569374 STX12Q86Y82 276 aa6.36□□□□□ -1.39
CCDC113-205ENST00000569374 MMD2Q8IY49 270 aa6.36□□□□□ -1.39
CCDC113-205ENST00000569374 TCTEX1D1Q8N7M0 179 aa6.36□□□□□ -1.39
CCDC113-205ENST00000569374 BHLHE23Q8NDY6 225 aa6.36□□□□□ -1.39
CCDC113-205ENST00000569374 SLC25A40Q8TBP6 338 aa6.36□□□□□ -1.39
CCDC113-205ENST00000569374 TAF15Q92804 592 aaKnown RBP eCLIP6.36□□□□□ -1.39
CCDC113-205ENST00000569374 RAB40CQ96S21 281 aa6.36□□□□□ -1.39
CCDC113-205ENST00000569374 OR2J1Q9GZK6 312 aa6.36□□□□□ -1.39
CCDC113-205ENST00000569374 HIPK2Q9H2X6 1198 aa6.36□□□□□ -1.39
CCDC113-205ENST00000569374 TUBA4BQ9H853 241 aa6.36□□□□□ -1.39
CCDC113-205ENST00000569374 LYRM2Q9NU23 88 aaPredicted RBP6.36□□□□□ -1.39
CCDC113-205ENST00000569374 CACFD1Q9UGQ2 172 aa6.36□□□□□ -1.39
CCDC113-205ENST00000569374 DOCK11Q5JSL3 2073 aa6.35□□□□□ -1.39
CCDC113-205ENST00000569374 SAA2-SAA4A0A096LPE2 208 aa6.35□□□□□ -1.39
CCDC113-205ENST00000569374 A0A1W2PS18 150 aa6.35□□□□□ -1.39
CCDC113-205ENST00000569374 NDUFS8O00217 210 aa6.35□□□□□ -1.39
CCDC113-205ENST00000569374 SFTA3P0C7M3 94 aa6.35□□□□□ -1.39
CCDC113-205ENST00000569374 OR8U9P0C7N5 309 aa6.35□□□□□ -1.39
CCDC113-205ENST00000569374 SNCAP37840 140 aa6.35□□□□□ -1.39
CCDC113-205ENST00000569374 NPBWR2P48146 333 aa6.35□□□□□ -1.39
CCDC113-205ENST00000569374 ARHGDIBP52566 201 aa6.35□□□□□ -1.39
CCDC113-205ENST00000569374 TAS2R30P59541 319 aa6.35□□□□□ -1.39
CCDC113-205ENST00000569374 BPIFB3P59826 476 aa6.35□□□□□ -1.39
CCDC113-205ENST00000569374 LMO4P61968 165 aa6.35□□□□□ -1.39
CCDC113-205ENST00000569374 HLA-DRB3P79483 266 aa6.35□□□□□ -1.39
CCDC113-205ENST00000569374 RHEBQ15382 184 aa6.35□□□□□ -1.39
CCDC113-205ENST00000569374 SP6Q3SY56 376 aa6.35□□□□□ -1.39
CCDC113-205ENST00000569374 DMRTC1Q5HYR2 192 aa6.35□□□□□ -1.39
CCDC113-205ENST00000569374 OR4A47Q6IF82 309 aa6.35□□□□□ -1.39
CCDC113-205ENST00000569374 ZNF880Q6PDB4 577 aa6.35□□□□□ -1.39
CCDC113-205ENST00000569374 SELENOHQ8IZQ5 122 aaKnown RBP6.35□□□□□ -1.39
CCDC113-205ENST00000569374 PUSL1Q8N0Z8 303 aaKnown RBP6.35□□□□□ -1.39
CCDC113-205ENST00000569374 SLC35G3Q8N808 338 aa6.35□□□□□ -1.39
CCDC113-205ENST00000569374 C15orf54Q8N8G6 183 aa6.35□□□□□ -1.39
CCDC113-205ENST00000569374 SUMF2Q8NBJ7 301 aa6.35□□□□□ -1.39
CCDC113-205ENST00000569374 OR1J1Q8NGS3 322 aa6.35□□□□□ -1.39
CCDC113-205ENST00000569374 SECTM1Q8WVN6 248 aa6.35□□□□□ -1.39
CCDC113-205ENST00000569374 LSM10Q969L4 123 aaKnown RBP6.35□□□□□ -1.39
CCDC113-205ENST00000569374 RBMXL1Q96E39 390 aaKnown RBP6.35□□□□□ -1.39
CCDC113-205ENST00000569374 C17orf77Q96MU5 243 aa6.35□□□□□ -1.39
CCDC113-205ENST00000569374 CABLES2Q9BTV7 478 aa6.35□□□□□ -1.39
CCDC113-205ENST00000569374 C19orf24Q9BVV8 132 aa6.35□□□□□ -1.39
CCDC113-205ENST00000569374 EIF5A2Q9GZV4 153 aaKnown RBP6.35□□□□□ -1.39
CCDC113-205ENST00000569374 RAB1BQ9H0U4 201 aa6.35□□□□□ -1.39
CCDC113-205ENST00000569374 OR51I2Q9H344 312 aa6.35□□□□□ -1.39
CCDC113-205ENST00000569374 C19orf12Q9NSK7 152 aa6.35□□□□□ -1.39
CCDC113-205ENST00000569374 KCNIP1Q9NZI2 227 aa6.35□□□□□ -1.39
CCDC113-205ENST00000569374 MTCH1Q9NZJ7 389 aa6.35□□□□□ -1.39
CCDC113-205ENST00000569374 RCL1Q9Y2P8 373 aaKnown RBP6.35□□□□□ -1.39
CCDC113-205ENST00000569374 PRELID3BQ9Y3B1 194 aa6.35□□□□□ -1.39
CCDC113-205ENST00000569374 LOC105371242A0A075B767 164 aa6.34□□□□□ -1.39
CCDC113-205ENST00000569374 IGLV5-45A0A087WSX0 123 aa6.34□□□□□ -1.39
CCDC113-205ENST00000569374 PPIHO43447 177 aaKnown RBP6.34□□□□□ -1.39
CCDC113-205ENST00000569374 KCNAB3O43448 404 aa6.34□□□□□ -1.39
CCDC113-205ENST00000569374 IFNA5P01569 189 aa6.34□□□□□ -1.39
CCDC113-205ENST00000569374 FOLR2P14207 255 aa6.34□□□□□ -1.39
CCDC113-205ENST00000569374 MUC1P15941 1255 aaPredicted RBP6.34□□□□□ -1.39
CCDC113-205ENST00000569374 F2RP25116 425 aa6.34□□□□□ -1.39
CCDC113-205ENST00000569374 LPAR6P43657 344 aa6.34□□□□□ -1.39
CCDC113-205ENST00000569374 GPR6P46095 362 aaPredicted RBP6.34□□□□□ -1.39
CCDC113-205ENST00000569374 GLIPR1P48060 266 aa6.34□□□□□ -1.39
CCDC113-205ENST00000569374 KLF3P57682 345 aaPredicted RBP6.34□□□□□ -1.39
CCDC113-205ENST00000569374 HBG1P69891 147 aa6.34□□□□□ -1.39
CCDC113-205ENST00000569374 HBG2P69892 147 aa6.34□□□□□ -1.39
CCDC113-205ENST00000569374 EWSR1Q01844 656 aaKnown RBP eCLIP6.34□□□□□ -1.39
CCDC113-205ENST00000569374 ZNF616Q08AN1 781 aa6.34□□□□□ -1.39
CCDC113-205ENST00000569374 GUK1Q16774 197 aa6.34□□□□□ -1.39
CCDC113-205ENST00000569374 RNF212Q495C1 297 aa6.34□□□□□ -1.39
CCDC113-205ENST00000569374 C9orf47Q6ZRZ4 202 aa6.34□□□□□ -1.39
CCDC113-205ENST00000569374 H1FOOQ8IZA3 346 aaPredicted RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms