RNA–Protein interactions for RNA: ENST00000568566.5

TSC2-223, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-223ENST00000568566 ARPC1AQ92747 370 aa6.48□□□□□ -1.37
TSC2-223ENST00000568566 GPR146Q96CH1 333 aa6.48□□□□□ -1.37
TSC2-223ENST00000568566 LYSTQ99698 3801 aa6.48□□□□□ -1.37
TSC2-223ENST00000568566 SLC25A21Q9BQT8 299 aaPredicted RBP6.48□□□□□ -1.37
TSC2-223ENST00000568566 MCRIP2Q9BUT9 160 aaKnown RBP6.48□□□□□ -1.37
TSC2-223ENST00000568566 QTRT1Q9BXR0 403 aaKnown RBP6.48□□□□□ -1.37
TSC2-223ENST00000568566 TMEM222Q9H0R3 208 aa6.48□□□□□ -1.37
TSC2-223ENST00000568566 GNB4Q9HAV0 340 aa6.48□□□□□ -1.37
TSC2-223ENST00000568566 PLEKHA2Q9HB19 425 aa6.48□□□□□ -1.37
TSC2-223ENST00000568566 SCP2D1Q9UJQ7 156 aa6.48□□□□□ -1.37
TSC2-223ENST00000568566 C14orf166Q9Y224 244 aaKnown RBP6.48□□□□□ -1.37
TSC2-223ENST00000568566 DMRT1Q9Y5R6 373 aa6.48□□□□□ -1.37
TSC2-223ENST00000568566 S4R3C0 116 aa6.48□□□□□ -1.37
TSC2-223ENST00000568566 DNAH1Q9P2D7 4330 aa6.47□□□□□ -1.37
TSC2-223ENST00000568566 A0A1W2PN81 502 aa6.47□□□□□ -1.37
TSC2-223ENST00000568566 MARCH11A6NNE9 402 aa6.47□□□□□ -1.37
TSC2-223ENST00000568566 PRAF2O60831 178 aa6.47□□□□□ -1.37
TSC2-223ENST00000568566 HRASP01112 189 aa6.47□□□□□ -1.37
TSC2-223ENST00000568566 IGLV1-40P01703 118 aa6.47□□□□□ -1.37
TSC2-223ENST00000568566 NQO2P16083 231 aa6.47□□□□□ -1.37
TSC2-223ENST00000568566 CHRNA7P36544 502 aa6.47□□□□□ -1.37
TSC2-223ENST00000568566 CRIP2P52943 208 aaPredicted RBP6.47□□□□□ -1.37
TSC2-223ENST00000568566 MFAP2P55001 183 aa6.47□□□□□ -1.37
TSC2-223ENST00000568566 TAS2R31P59538 309 aa6.47□□□□□ -1.37
TSC2-223ENST00000568566 DHODHQ02127 395 aa6.47□□□□□ -1.37
TSC2-223ENST00000568566 SURF2Q15527 256 aaPredicted RBP6.47□□□□□ -1.37
TSC2-223ENST00000568566 FOXRED2Q8IWF2 684 aa6.47□□□□□ -1.37
TSC2-223ENST00000568566 PPP1R14BQ96C90 147 aa6.47□□□□□ -1.37
TSC2-223ENST00000568566 ZNF486Q96H40 463 aaPredicted RBP6.47□□□□□ -1.37
TSC2-223ENST00000568566 SCGB3A2Q96PL1 93 aa6.47□□□□□ -1.37
TSC2-223ENST00000568566 SEC22CQ9BRL7 303 aa6.47□□□□□ -1.37
TSC2-223ENST00000568566 BET1LQ9NYM9 111 aa6.47□□□□□ -1.37
TSC2-223ENST00000568566 LSM4Q9Y4Z0 139 aaKnown RBP6.47□□□□□ -1.37
TSC2-223ENST00000568566 LCE6AA0A183 80 aa6.46□□□□□ -1.38
TSC2-223ENST00000568566 IGLC7A0M8Q6 106 aa6.46□□□□□ -1.38
TSC2-223ENST00000568566 MPTX1A8MV57 137 aa6.46□□□□□ -1.38
TSC2-223ENST00000568566 CDS2O95674 445 aa6.46□□□□□ -1.38
TSC2-223ENST00000568566 DHFRP00374 187 aa6.46□□□□□ -1.38
TSC2-223ENST00000568566 IGHV3-11P01762 117 aa6.46□□□□□ -1.38
TSC2-223ENST00000568566 IGHG4P01861 327 aa6.46□□□□□ -1.38
TSC2-223ENST00000568566 TCRBP04435 133 aa6.46□□□□□ -1.38
TSC2-223ENST00000568566 SERPINE2P07093 398 aa6.46□□□□□ -1.38
TSC2-223ENST00000568566 HLA-GP17693 338 aa6.46□□□□□ -1.38
TSC2-223ENST00000568566 PSMB8P28062 276 aa6.46□□□□□ -1.38
TSC2-223ENST00000568566 RPL27AP46776 148 aaKnown RBP6.46□□□□□ -1.38
TSC2-223ENST00000568566 RPL8P62917 257 aaKnown RBP6.46□□□□□ -1.38
TSC2-223ENST00000568566 WT1-ASQ06250 92 aa6.46□□□□□ -1.38
TSC2-223ENST00000568566 CBX3Q13185 183 aa6.46□□□□□ -1.38
TSC2-223ENST00000568566 RBMS2Q15434 407 aaKnown RBP6.46□□□□□ -1.38
TSC2-223ENST00000568566 TMEM268Q5VZI3 342 aa6.46□□□□□ -1.38
TSC2-223ENST00000568566 NRARPQ7Z6K4 114 aa6.46□□□□□ -1.38
TSC2-223ENST00000568566 SLC25A42Q86VD7 318 aa6.46□□□□□ -1.38
TSC2-223ENST00000568566 MMD2Q8IY49 270 aa6.46□□□□□ -1.38
TSC2-223ENST00000568566 SLC35G3Q8N808 338 aa6.46□□□□□ -1.38
TSC2-223ENST00000568566 CCDC71LQ8N9Z2 235 aa6.46□□□□□ -1.38
TSC2-223ENST00000568566 KLHL30-AS1Q8NEE0 82 aa6.46□□□□□ -1.38
TSC2-223ENST00000568566 WDR89Q96FK6 387 aaPredicted RBP6.46□□□□□ -1.38
TSC2-223ENST00000568566 MARVELD1Q9BSK0 173 aa6.46□□□□□ -1.38
TSC2-223ENST00000568566 HINT2Q9BX68 163 aa6.46□□□□□ -1.38
TSC2-223ENST00000568566 COMMD9Q9P000 198 aa6.46□□□□□ -1.38
TSC2-223ENST00000568566 ZMAT5Q9UDW3 170 aaKnown RBP6.46□□□□□ -1.38
TSC2-223ENST00000568566 IGHV3-21A0A0B4J1V1 117 aa6.45□□□□□ -1.38
TSC2-223ENST00000568566 C9orf170A2RU37 121 aa6.45□□□□□ -1.38
TSC2-223ENST00000568566 ST8SIA3O43173 380 aa6.45□□□□□ -1.38
TSC2-223ENST00000568566 ADAP1O75689 374 aa6.45□□□□□ -1.38
TSC2-223ENST00000568566 NDUFB8O95169 186 aa6.45□□□□□ -1.38
TSC2-223ENST00000568566 SFT2D2O95562 160 aa6.45□□□□□ -1.38
TSC2-223ENST00000568566 TRBV12-3P01733 135 aa6.45□□□□□ -1.38
TSC2-223ENST00000568566 IGHV3-23P01764 117 aa6.45□□□□□ -1.38
TSC2-223ENST00000568566 VDAC1P21796 283 aa6.45□□□□□ -1.38
TSC2-223ENST00000568566 VAMP1P23763 118 aa6.45□□□□□ -1.38
TSC2-223ENST00000568566 MYCNOSP40205 109 aa6.45□□□□□ -1.38
TSC2-223ENST00000568566 RAB9AP51151 201 aa6.45□□□□□ -1.38
TSC2-223ENST00000568566 H2BFWTQ7Z2G1 175 aa6.45□□□□□ -1.38
TSC2-223ENST00000568566 SGPP2Q8IWX5 399 aa6.45□□□□□ -1.38
TSC2-223ENST00000568566 ZNF491Q8N8L2 437 aa6.45□□□□□ -1.38
TSC2-223ENST00000568566 MYOZ3Q8TDC0 251 aa6.45□□□□□ -1.38
TSC2-223ENST00000568566 CD300LFQ8TDQ1 290 aa6.45□□□□□ -1.38
TSC2-223ENST00000568566 GALNT14Q96FL9 552 aa6.45□□□□□ -1.38
TSC2-223ENST00000568566 TMEM56Q96MV1 263 aa6.45□□□□□ -1.38
TSC2-223ENST00000568566 FANCD2OSQ96PS1 177 aa6.45□□□□□ -1.38
TSC2-223ENST00000568566 P2RX4Q99571 388 aa6.45□□□□□ -1.38
TSC2-223ENST00000568566 C20orf85Q9H1P6 137 aa6.45□□□□□ -1.38
TSC2-223ENST00000568566 FOXA2Q9Y261 457 aaPredicted RBP6.45□□□□□ -1.38
TSC2-223ENST00000568566 BOLA1Q9Y3E2 137 aa6.45□□□□□ -1.38
TSC2-223ENST00000568566 OR51B2Q9Y5P1 312 aa6.45□□□□□ -1.38
TSC2-223ENST00000568566 TMEM56-RWDD3S4R434 201 aa6.45□□□□□ -1.38
TSC2-223ENST00000568566 CSMD3Q7Z407 3707 aa6.45□□□□□ -1.38
TSC2-223ENST00000568566 HYDINQ4G0P3 5121 aa6.45□□□□□ -1.38
TSC2-223ENST00000568566 PIGBOS1A0A0B4J2F0 54 aa6.44□□□□□ -1.38
TSC2-223ENST00000568566 OR2J3O76001 311 aa6.44□□□□□ -1.38
TSC2-223ENST00000568566 IGHV3-48P01763 117 aa6.44□□□□□ -1.38
TSC2-223ENST00000568566 HOXB5P09067 269 aa6.44□□□□□ -1.38
TSC2-223ENST00000568566 H2AFB2P0C5Z0 115 aa6.44□□□□□ -1.38
TSC2-223ENST00000568566 OR4E1P0C645 316 aa6.44□□□□□ -1.38
TSC2-223ENST00000568566 TRAPPC2P0DI81 140 aa6.44□□□□□ -1.38
TSC2-223ENST00000568566 TRAPPC2BP0DI82 140 aa6.44□□□□□ -1.38
TSC2-223ENST00000568566 LYL1P12980 280 aa6.44□□□□□ -1.38
TSC2-223ENST00000568566 MECP2P51608 486 aaKnown RBP6.44□□□□□ -1.38
TSC2-223ENST00000568566 ERVK-16P61578 105 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms