RNA–Protein interactions for RNA: ENST00000568494.1

ZNRF1-208, Transcript of zinc and ring finger 1, human

TSL 2

Gene ZNRF1, Length 2,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNRF1-208	ENST00000568494	C19orf84	I3L1E1	186 aa		10.79	□□□□□ -0.68
ZNRF1-208	ENST00000568494	KBTBD11	O94819	623 aa		10.79	□□□□□ -0.68
ZNRF1-208	ENST00000568494	S100A8	P05109	93 aa		10.79	□□□□□ -0.68
ZNRF1-208	ENST00000568494		Q8N7P7	452 aa		10.79	□□□□□ -0.68
ZNRF1-208	ENST00000568494	ZNF709	Q8N972	641 aa		10.79	□□□□□ -0.68
ZNRF1-208	ENST00000568494	OR10G4	Q8NGN3	311 aa		10.79	□□□□□ -0.68
ZNRF1-208	ENST00000568494	OR10G9	Q8NGN4	311 aa		10.79	□□□□□ -0.68
ZNRF1-208	ENST00000568494	OR10G7	Q8NGN6	311 aa		10.79	□□□□□ -0.68
ZNRF1-208	ENST00000568494	OR9G1	Q8NH87	305 aa		10.79	□□□□□ -0.68
ZNRF1-208	ENST00000568494	ST6GALNAC6	Q969X2	333 aa		10.79	□□□□□ -0.68
ZNRF1-208	ENST00000568494	TMEM186	Q96B77	213 aa		10.79	□□□□□ -0.68
ZNRF1-208	ENST00000568494	YPEL4	Q96NS1	127 aa		10.79	□□□□□ -0.68
ZNRF1-208	ENST00000568494	MAP1LC3B	Q9GZQ8	125 aa		10.79	□□□□□ -0.68
ZNRF1-208	ENST00000568494	RAB1B	Q9H0U4	201 aa		10.79	□□□□□ -0.68
ZNRF1-208	ENST00000568494	TEX50	A0A1B0GTY4	177 aa		10.79	□□□□□ -0.68
ZNRF1-208	ENST00000568494	C17orf112	F2Z3M2	114 aa		10.79	□□□□□ -0.68
ZNRF1-208	ENST00000568494	FSTL3	O95633	263 aa		10.79	□□□□□ -0.68
ZNRF1-208	ENST00000568494	CA2	P00918	260 aa		10.79	□□□□□ -0.68
ZNRF1-208	ENST00000568494	SOD3	P08294	240 aa		10.79	□□□□□ -0.68
ZNRF1-208	ENST00000568494	CEBPG	P53567	150 aa		10.79	□□□□□ -0.68
ZNRF1-208	ENST00000568494	DLX1	P56177	255 aa		10.79	□□□□□ -0.68
ZNRF1-208	ENST00000568494	RAB11A	P62491	216 aa		10.79	□□□□□ -0.68
ZNRF1-208	ENST00000568494	PRB3	Q04118	309 aa	Predicted RBP	10.79	□□□□□ -0.68
ZNRF1-208	ENST00000568494	TMEM177	Q53S58	311 aa		10.79	□□□□□ -0.68
ZNRF1-208	ENST00000568494	KHDC3L	Q587J8	217 aa		10.79	□□□□□ -0.68
ZNRF1-208	ENST00000568494	C11orf71	Q6IPW1	123 aa		10.79	□□□□□ -0.68
ZNRF1-208	ENST00000568494	OSR1	Q8TAX0	266 aa	Predicted RBP	10.79	□□□□□ -0.68
ZNRF1-208	ENST00000568494	LHX4	Q969G2	390 aa		10.79	□□□□□ -0.68
ZNRF1-208	ENST00000568494	TMEM133	Q9H2Q1	129 aa		10.79	□□□□□ -0.68
ZNRF1-208	ENST00000568494	BET1L	Q9NYM9	111 aa		10.79	□□□□□ -0.68
ZNRF1-208	ENST00000568494	METTL1	Q9UBP6	276 aa	Known RBP	10.79	□□□□□ -0.68
ZNRF1-208	ENST00000568494	ABCA4	P78363	2273 aa		10.78	□□□□□ -0.68
ZNRF1-208	ENST00000568494	ZFP92	A6NM28	416 aa		10.78	□□□□□ -0.68
ZNRF1-208	ENST00000568494	HMGB3	O15347	200 aa	Known RBP	10.78	□□□□□ -0.68
ZNRF1-208	ENST00000568494	MB	P02144	154 aa		10.78	□□□□□ -0.68
ZNRF1-208	ENST00000568494	SMIM6	P0DI80	62 aa		10.78	□□□□□ -0.68
ZNRF1-208	ENST00000568494	NPY1R	P25929	384 aa		10.78	□□□□□ -0.68
ZNRF1-208	ENST00000568494	DLK1	P80370	383 aa		10.78	□□□□□ -0.68
ZNRF1-208	ENST00000568494	FAM71F2	Q6NXP2	309 aa		10.78	□□□□□ -0.68
ZNRF1-208	ENST00000568494	C1QL4	Q86Z23	238 aa		10.78	□□□□□ -0.68
ZNRF1-208	ENST00000568494	SLC24A4	Q8NFF2	622 aa		10.78	□□□□□ -0.68
ZNRF1-208	ENST00000568494	FLYWCH2	Q96CP2	140 aa	Known RBP	10.78	□□□□□ -0.68
ZNRF1-208	ENST00000568494	HARBI1	Q96MB7	349 aa		10.78	□□□□□ -0.68
ZNRF1-208	ENST00000568494	GGACT	Q9BVM4	153 aa		10.78	□□□□□ -0.68
ZNRF1-208	ENST00000568494	SLC25A22	Q9H936	323 aa		10.78	□□□□□ -0.68
ZNRF1-208	ENST00000568494	ZNF257	Q9Y2Q1	563 aa		10.78	□□□□□ -0.68
ZNRF1-208	ENST00000568494	PTPN13	Q12923	2485 aa		10.78	□□□□□ -0.68
ZNRF1-208	ENST00000568494		A0A087WWC5	75 aa		10.77	□□□□□ -0.68
ZNRF1-208	ENST00000568494	IGHV2-5	P01817	119 aa		10.77	□□□□□ -0.68
ZNRF1-208	ENST00000568494	BCL2	P10415	239 aa		10.77	□□□□□ -0.68
ZNRF1-208	ENST00000568494	TAGLN2	P37802	199 aa	Known RBP	10.77	□□□□□ -0.68
ZNRF1-208	ENST00000568494	CTAG1A	P78358	180 aa		10.77	□□□□□ -0.68
ZNRF1-208	ENST00000568494	PRCD	Q00LT1	54 aa		10.77	□□□□□ -0.68
ZNRF1-208	ENST00000568494	FABP9	Q0Z7S8	132 aa		10.77	□□□□□ -0.68
ZNRF1-208	ENST00000568494	TREML4	Q6UXN2	200 aa		10.77	□□□□□ -0.68
ZNRF1-208	ENST00000568494	CYB561D1	Q8N8Q1	229 aa		10.77	□□□□□ -0.68
ZNRF1-208	ENST00000568494	PLEKHA3	Q9HB20	300 aa		10.77	□□□□□ -0.68
ZNRF1-208	ENST00000568494	S100A9	P06702	114 aa	Known RBP	10.77	□□□□□ -0.69
ZNRF1-208	ENST00000568494	ZNF137P	P52743	207 aa		10.77	□□□□□ -0.69
ZNRF1-208	ENST00000568494	TVP23C	Q96ET8	276 aa		10.77	□□□□□ -0.69
ZNRF1-208	ENST00000568494	ACTR3C	Q9C0K3	210 aa	Predicted RBP	10.77	□□□□□ -0.69
ZNRF1-208	ENST00000568494	TMPRSS5	Q9H3S3	457 aa		10.77	□□□□□ -0.69
ZNRF1-208	ENST00000568494	PPIAL4C	A0A0B4J2A2	164 aa		10.76	□□□□□ -0.69
ZNRF1-208	ENST00000568494	CTXND1	A0A1B0GTU2	59 aa		10.76	□□□□□ -0.69
ZNRF1-208	ENST00000568494	PPIAL4G	P0DN37	164 aa		10.76	□□□□□ -0.69
ZNRF1-208	ENST00000568494	ACOT6	Q3I5F7	207 aa	Predicted RBP	10.76	□□□□□ -0.69
ZNRF1-208	ENST00000568494	WDR25	Q64LD2	544 aa	Predicted RBP	10.76	□□□□□ -0.69
ZNRF1-208	ENST00000568494	RBMS3	Q6XE24	437 aa	Known RBP	10.76	□□□□□ -0.69
ZNRF1-208	ENST00000568494	PDPN	Q86YL7	162 aa		10.76	□□□□□ -0.69
ZNRF1-208	ENST00000568494	TGIF2LX	Q8IUE1	241 aa		10.76	□□□□□ -0.69
ZNRF1-208	ENST00000568494	OR8B3	Q8NGG8	313 aa		10.76	□□□□□ -0.69
ZNRF1-208	ENST00000568494	C1orf159	Q96HA4	380 aa		10.76	□□□□□ -0.69
ZNRF1-208	ENST00000568494	OR8B2	Q96RD0	313 aa		10.76	□□□□□ -0.69
ZNRF1-208	ENST00000568494	MGST2	Q99735	147 aa		10.76	□□□□□ -0.69
ZNRF1-208	ENST00000568494	TCEAL7	Q9BRU2	100 aa		10.76	□□□□□ -0.69
ZNRF1-208	ENST00000568494	NIPSNAP3B	Q9BS92	247 aa		10.76	□□□□□ -0.69
ZNRF1-208	ENST00000568494	FKBP11	Q9NYL4	201 aa		10.76	□□□□□ -0.69
ZNRF1-208	ENST00000568494	IGHV2-26	A0A0B4J1V2	119 aa		10.75	□□□□□ -0.69
ZNRF1-208	ENST00000568494		A0A1W2PPR1	153 aa		10.75	□□□□□ -0.69
ZNRF1-208	ENST00000568494		A1L4Q6	167 aa		10.75	□□□□□ -0.69
ZNRF1-208	ENST00000568494	AP4M1	O00189	453 aa		10.75	□□□□□ -0.69
ZNRF1-208	ENST00000568494	IGLV2-23	P01705	113 aa		10.75	□□□□□ -0.69
ZNRF1-208	ENST00000568494	DEFA4	P12838	97 aa		10.75	□□□□□ -0.69
ZNRF1-208	ENST00000568494	ARSJ	Q5FYB0	599 aa	Predicted RBP	10.75	□□□□□ -0.69
ZNRF1-208	ENST00000568494	GCSAML	Q5JQS6	135 aa		10.75	□□□□□ -0.69
ZNRF1-208	ENST00000568494	SLC35E3	Q7Z769	313 aa		10.75	□□□□□ -0.69
ZNRF1-208	ENST00000568494	OR4C13	Q8NGP0	309 aa		10.75	□□□□□ -0.69
ZNRF1-208	ENST00000568494	RITA1	Q96K30	269 aa		10.75	□□□□□ -0.69
ZNRF1-208	ENST00000568494	MIOX	Q9UGB7	285 aa		10.75	□□□□□ -0.69
ZNRF1-208	ENST00000568494	WASHC3	Q9Y3C0	194 aa		10.75	□□□□□ -0.69
ZNRF1-208	ENST00000568494	ZNF727	A8MUV8	499 aa		10.75	□□□□□ -0.69
ZNRF1-208	ENST00000568494	IL3RA	P26951	378 aa		10.75	□□□□□ -0.69
ZNRF1-208	ENST00000568494	B2M	P61769	119 aa		10.75	□□□□□ -0.69
ZNRF1-208	ENST00000568494	OR5B3	Q8NH48	314 aa		10.75	□□□□□ -0.69
ZNRF1-208	ENST00000568494	NANP	Q8TBE9	248 aa		10.75	□□□□□ -0.69
ZNRF1-208	ENST00000568494	NEU4	Q8WWR8	484 aa	Predicted RBP	10.75	□□□□□ -0.69
ZNRF1-208	ENST00000568494	RAB24	Q969Q5	203 aa		10.75	□□□□□ -0.69
ZNRF1-208	ENST00000568494	NEIL1	Q96FI4	390 aa	Predicted RBP	10.75	□□□□□ -0.69
ZNRF1-208	ENST00000568494	PCGF1	Q9BSM1	259 aa		10.75	□□□□□ -0.69
ZNRF1-208	ENST00000568494	SIRT7	Q9NRC8	400 aa		10.75	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms