RNA–Protein interactions for RNA: ENST00000568232.1

CLK3-222, Transcript of CDC like kinase 3, humanhuman

Gene CLK3, Length 958 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-222ENST00000568232 OR4A4PQ8NGN8 299 aa8.42□□□□□ -1.06
CLK3-222ENST00000568232 OR10J5Q8NHC4 309 aa8.42□□□□□ -1.06
CLK3-222ENST00000568232 TMEM167AQ8TBQ9 72 aa8.42□□□□□ -1.06
CLK3-222ENST00000568232 GIMAP1Q8WWP7 306 aa8.42□□□□□ -1.06
CLK3-222ENST00000568232 ARHGAP5-AS1Q96IT6 56 aa8.42□□□□□ -1.06
CLK3-222ENST00000568232 OR2A7Q96R45 310 aa8.42□□□□□ -1.06
CLK3-222ENST00000568232 BCL7BQ9BQE9 202 aa8.42□□□□□ -1.06
CLK3-222ENST00000568232 RHPN1-AS1Q9BWJ2 59 aa8.42□□□□□ -1.06
CLK3-222ENST00000568232 CLEC5AQ9NY25 188 aa8.42□□□□□ -1.06
CLK3-222ENST00000568232 RSL24D1Q9UHA3 163 aaKnown RBP8.42□□□□□ -1.06
CLK3-222ENST00000568232 FAT1Q14517 4588 aa8.42□□□□□ -1.06
CLK3-222ENST00000568232 IGHV3OR16-13A0A075B7E8 117 aa8.41□□□□□ -1.06
CLK3-222ENST00000568232 TRBV6-7A0A0A0MS04 114 aa8.41□□□□□ -1.06
CLK3-222ENST00000568232 IGHV3-21A0A0B4J1V1 117 aa8.41□□□□□ -1.06
CLK3-222ENST00000568232 IGHV3-74A0A0B4J1X5 117 aa8.41□□□□□ -1.06
CLK3-222ENST00000568232 FOXI3A8MTJ6 420 aaPredicted RBP8.41□□□□□ -1.06
CLK3-222ENST00000568232 K7EMT4 169 aa8.41□□□□□ -1.06
CLK3-222ENST00000568232 NDUFA4O00483 81 aa8.41□□□□□ -1.06
CLK3-222ENST00000568232 CRHBPP24387 322 aa8.41□□□□□ -1.06
CLK3-222ENST00000568232 DEFB131AP59861 70 aa8.41□□□□□ -1.06
CLK3-222ENST00000568232 ARFRP1Q13795 201 aa8.41□□□□□ -1.06
CLK3-222ENST00000568232 INSL4Q14641 139 aa8.41□□□□□ -1.06
CLK3-222ENST00000568232 SPATA12Q7Z6I5 190 aa8.41□□□□□ -1.06
CLK3-222ENST00000568232 PUSL1Q8N0Z8 303 aaKnown RBP8.41□□□□□ -1.06
CLK3-222ENST00000568232 FAM24BQ8N5W8 94 aa8.41□□□□□ -1.06
CLK3-222ENST00000568232 MAFIPQ8WZ33 124 aa8.41□□□□□ -1.06
CLK3-222ENST00000568232 ZNF414Q96IQ9 312 aa8.41□□□□□ -1.06
CLK3-222ENST00000568232 PECRQ9BY49 303 aa8.41□□□□□ -1.06
CLK3-222ENST00000568232 IGHV7-4-1A0A0J9YVY3 117 aa8.4□□□□□ -1.06
CLK3-222ENST00000568232 C4BPBP20851 252 aa8.4□□□□□ -1.06
CLK3-222ENST00000568232 MAS1LP35410 378 aa8.4□□□□□ -1.06
CLK3-222ENST00000568232 TMBIM6P55061 237 aa8.4□□□□□ -1.06
CLK3-222ENST00000568232 IRF3Q14653 427 aa8.4□□□□□ -1.06
CLK3-222ENST00000568232 C1orf100Q5SVJ3 147 aa8.4□□□□□ -1.06
CLK3-222ENST00000568232 FAM90A2PQ658T7 463 aa8.4□□□□□ -1.06
CLK3-222ENST00000568232 LRRTM1Q86UE6 522 aa8.4□□□□□ -1.06
CLK3-222ENST00000568232 STHQ8IWL8 128 aa8.4□□□□□ -1.06
CLK3-222ENST00000568232 FAM89BQ8N5H3 189 aa8.4□□□□□ -1.06
CLK3-222ENST00000568232 TMEM116Q8NCL8 245 aa8.4□□□□□ -1.06
CLK3-222ENST00000568232 FCGR1BQ92637 280 aa8.4□□□□□ -1.06
CLK3-222ENST00000568232 CABLES2Q9BTV7 478 aa8.4□□□□□ -1.06
CLK3-222ENST00000568232 HSF4Q9ULV5 492 aa8.4□□□□□ -1.06
CLK3-222ENST00000568232 VPS13BQ7Z7G8 4022 aa8.39□□□□□ -1.07
CLK3-222ENST00000568232 C15orf62A8K5M9 175 aa8.39□□□□□ -1.07
CLK3-222ENST00000568232 F8W735 103 aaPredicted RBP8.39□□□□□ -1.07
CLK3-222ENST00000568232 CELP19835 753 aa8.39□□□□□ -1.07
CLK3-222ENST00000568232 DCKP27707 260 aa8.39□□□□□ -1.07
CLK3-222ENST00000568232 BRWD1-AS2P59051 145 aa8.39□□□□□ -1.07
CLK3-222ENST00000568232 RNF212Q495C1 297 aa8.39□□□□□ -1.07
CLK3-222ENST00000568232 PLAC9Q5JTB6 97 aa8.39□□□□□ -1.07
CLK3-222ENST00000568232 KCTD9Q7L273 389 aa8.39□□□□□ -1.07
CLK3-222ENST00000568232 ZNF367Q7RTV3 350 aa8.39□□□□□ -1.07
CLK3-222ENST00000568232 ZNF485Q8NCK3 441 aa8.39□□□□□ -1.07
CLK3-222ENST00000568232 VSTM2AQ8TAG5 236 aa8.39□□□□□ -1.07
CLK3-222ENST00000568232 VN1R17PQ8TDU5 208 aa8.39□□□□□ -1.07
CLK3-222ENST00000568232 RAB2BQ8WUD1 216 aa8.39□□□□□ -1.07
CLK3-222ENST00000568232 BSCL2Q96G97 398 aaPredicted RBP8.39□□□□□ -1.07
CLK3-222ENST00000568232 RBM38Q9H0Z9 239 aaKnown RBP8.39□□□□□ -1.07
CLK3-222ENST00000568232 PLCXD1Q9NUJ7 323 aa8.39□□□□□ -1.07
CLK3-222ENST00000568232 TBC1D24Q9ULP9 559 aa8.39□□□□□ -1.07
CLK3-222ENST00000568232 IGLC7A0M8Q6 106 aa8.38□□□□□ -1.07
CLK3-222ENST00000568232 HLA-GP17693 338 aa8.38□□□□□ -1.07
CLK3-222ENST00000568232 OR2B8PP59922 312 aa8.38□□□□□ -1.07
CLK3-222ENST00000568232 RPL8P62917 257 aaKnown RBP8.38□□□□□ -1.07
CLK3-222ENST00000568232 PLA2G7Q13093 441 aa8.38□□□□□ -1.07
CLK3-222ENST00000568232 P2RY14Q15391 338 aa8.38□□□□□ -1.07
CLK3-222ENST00000568232 LINC00299Q6ZSB3 139 aa8.38□□□□□ -1.07
CLK3-222ENST00000568232 TRPT1Q86TN4 253 aaKnown RBP8.38□□□□□ -1.07
CLK3-222ENST00000568232 UBAC2Q8NBM4 344 aa8.38□□□□□ -1.07
CLK3-222ENST00000568232 CSNK1G2-AS1Q8NCQ2 148 aa8.38□□□□□ -1.07
CLK3-222ENST00000568232 GINS4Q9BRT9 223 aa8.38□□□□□ -1.07
CLK3-222ENST00000568232 URM1Q9BTM9 101 aaKnown RBP8.38□□□□□ -1.07
CLK3-222ENST00000568232 DUSP21Q9H596 190 aa8.38□□□□□ -1.07
CLK3-222ENST00000568232 THYN1Q9P016 225 aa8.38□□□□□ -1.07
CLK3-222ENST00000568232 PRELID3BQ9Y3B1 194 aa8.38□□□□□ -1.07
CLK3-222ENST00000568232 SCO2A0A1W2PP80 73 aa8.37□□□□□ -1.07
CLK3-222ENST00000568232 BPNT1O95861 308 aa8.37□□□□□ -1.07
CLK3-222ENST00000568232 FCGR3AP08637 254 aa8.37□□□□□ -1.07
CLK3-222ENST00000568232 MYL12AP19105 171 aa8.37□□□□□ -1.07
CLK3-222ENST00000568232 NPY1RP25929 384 aa8.37□□□□□ -1.07
CLK3-222ENST00000568232 KRTAP10-2P60368 255 aa8.37□□□□□ -1.07
CLK3-222ENST00000568232 LIPKQ5VXJ0 399 aa8.37□□□□□ -1.07
CLK3-222ENST00000568232 SPSB3Q6PJ21 355 aa8.37□□□□□ -1.07
CLK3-222ENST00000568232 TCF24Q7RTU0 167 aa8.37□□□□□ -1.07
CLK3-222ENST00000568232 PRSS48Q7RTY5 328 aa8.37□□□□□ -1.07
CLK3-222ENST00000568232 H1FOOQ8IZA3 346 aaPredicted RBP8.37□□□□□ -1.07
CLK3-222ENST00000568232 C6orf223Q8N319 242 aa8.37□□□□□ -1.07
CLK3-222ENST00000568232 LILRB2Q8N423 598 aa8.37□□□□□ -1.07
CLK3-222ENST00000568232 OR10W1Q8NGF6 305 aa8.37□□□□□ -1.07
CLK3-222ENST00000568232 CMTM3Q96MX0 182 aa8.37□□□□□ -1.07
CLK3-222ENST00000568232 MS4A6AQ9H2W1 248 aa8.37□□□□□ -1.07
CLK3-222ENST00000568232 TMEM14BQ9NUH8 114 aa8.37□□□□□ -1.07
CLK3-222ENST00000568232 DIMT1Q9UNQ2 313 aaKnown RBP8.37□□□□□ -1.07
CLK3-222ENST00000568232 MRPS7Q9Y2R9 242 aaKnown RBP8.37□□□□□ -1.07
CLK3-222ENST00000568232 KCNK7Q9Y2U2 307 aa8.37□□□□□ -1.07
CLK3-222ENST00000568232 IGKV1D-8A0A087WSZ0 117 aa8.36□□□□□ -1.07
CLK3-222ENST00000568232 TRAV3A0A0B4J244 114 aa8.36□□□□□ -1.07
CLK3-222ENST00000568232 IRGMA1A4Y4 181 aa8.36□□□□□ -1.07
CLK3-222ENST00000568232 EFCAB10A6NFE3 127 aa8.36□□□□□ -1.07
CLK3-222ENST00000568232 KNCNA6PVL3 124 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms