RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 IL36RNQ9UBH0 155 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 CLN8Q9UBY8 286 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 SMIM27A0A1W2PRY6 76 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 PINLYPA6NC86 204 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 C22orf46C9J442 243 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 PRSS46E5RG02 174 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 G3V3Y1 287 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 BMPR1BO00238 502 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 SLC17A3O00476 420 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 RRHO14718 337 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 DNPH1O43598 174 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 CLDN1O95832 211 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 CXorf1O96002 111 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 ZNF32P17041 273 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 REG1BP48304 166 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 AMTP48728 403 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 CLDN18P56856 261 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 BRWD1-AS2P59051 145 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 PDLIM3Q53GG5 364 aaPredicted RBP4.52□□□□□ -1.69
LINC01541-202ENST00000568095 DEFB125Q8N687 156 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 ZNF439Q8NDP4 499 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 FAM103A1Q9BTL3 118 aaKnown RBP4.52□□□□□ -1.69
LINC01541-202ENST00000568095 CLEC7AQ9BXN2 247 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 YTHDF2Q9Y5A9 579 aaKnown RBP4.52□□□□□ -1.69
LINC01541-202ENST00000568095 CUL9Q8IWT3 2517 aa4.52□□□□□ -1.69
LINC01541-202ENST00000568095 EP300Q09472 2414 aaPredicted RBP4.52□□□□□ -1.69
LINC01541-202ENST00000568095 C2orf70A6NJV1 201 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 C15orf62A8K5M9 175 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 HSBP1L1C9JCN9 74 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 DEFA4P12838 97 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 THBS3P49746 956 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 ARF6P62330 175 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 HTD2P86397 168 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 NRN1LQ496H8 165 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 SPATA46Q5T0L3 261 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 STUMQ69YW2 141 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 RASL11AQ6T310 242 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 PET117Q6UWS5 81 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 MOB1BQ7L9L4 216 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 RPS19BP1Q86WX3 136 aaKnown RBP4.51□□□□□ -1.69
LINC01541-202ENST00000568095 MCEMP1Q8IX19 187 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 MKXQ8IYA7 352 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 DRAM1Q8N682 238 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 FGFBP3Q8TAT2 258 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 ZNF596Q8TC21 504 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 NEUROG1Q92886 237 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 OSTCQ9NRP0 149 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.51□□□□□ -1.69
LINC01541-202ENST00000568095 MBNL3Q9NUK0 354 aaKnown RBP4.51□□□□□ -1.69
LINC01541-202ENST00000568095 CEP250Q9BV73 2442 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 MGAQ8IWI9 3026 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 TRAV38-1A0A0B4J264 116 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 ODAMA1E959 279 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 NPIPA3F8WFD2 350 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 RAB29O14966 203 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 LINC00869P0C866 280 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 IGLL1P15814 213 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 OTX2P32243 289 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 ARR3P36575 388 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 FAM71F2Q6NXP2 309 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 Q6P435 159 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 TMEM108Q6UXF1 575 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 TUSC5Q8IXB3 177 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 WDR31Q8NA23 367 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 C5orf30Q96GV9 206 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 CITED1Q99966 193 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 METTL7AQ9H8H3 244 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 RPH3ALQ9UNE2 315 aa4.51□□□□□ -1.69
LINC01541-202ENST00000568095 ZFHX2Q9C0A1 2572 aaPredicted RBP4.51□□□□□ -1.69
LINC01541-202ENST00000568095 ZZEF1O43149 2961 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 ZG16O60844 167 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 HLA-DQA1P01909 254 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 AMY1AP04745 511 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 ARL14EPLP0DKL9 152 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 PCBD1P61457 104 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 GCSAMLQ5JQS6 135 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 LDLRAD2Q5SZI1 272 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 EBLN2Q6P2I7 272 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 FAM180AQ6UWF9 173 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 ZNF497Q6ZNH5 498 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 GGNQ86UU5 652 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 SMIM12Q96EX1 92 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 PPP1R3CQ9UQK1 317 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 A0A1W2PR80 420 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 FAM181BA6NEQ2 426 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 ZNF716A6NP11 495 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 CLDN14O95500 239 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 HLA-DRB1P01911 266 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 DSCR4P56555 118 aaPredicted RBP4.5□□□□□ -1.69
LINC01541-202ENST00000568095 RNF151Q2KHN1 245 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 RNFT1Q5M7Z0 435 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 FAM120AOSQ5T036 256 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 BVES-AS1Q5T3Y7 98 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 ATP1A1-AS1Q5TC04 95 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 SLC35E4Q6ICL7 350 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 LHFPL4Q7Z7J7 247 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 OR8I2Q8N0Y5 310 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 BATF2Q8N1L9 274 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 ZNF645Q8N7E2 425 aa4.5□□□□□ -1.69
LINC01541-202ENST00000568095 C18orf32Q8TCD1 76 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms