RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 OR4X2Q8NGF9 303 aa14.05□□□□□ -0.16
COMMD4-222ENST00000568034 OR1L8Q8NGR8 309 aa14.05□□□□□ -0.16
COMMD4-222ENST00000568034 OR5B3Q8NH48 314 aa14.05□□□□□ -0.16
COMMD4-222ENST00000568034 OR4A16Q8NH70 328 aa14.05□□□□□ -0.16
COMMD4-222ENST00000568034 RNASE11Q8TAA1 199 aaKnown RBP14.05□□□□□ -0.16
COMMD4-222ENST00000568034 FAM110DQ8TAY7 271 aaPredicted RBP14.05□□□□□ -0.16
COMMD4-222ENST00000568034 MYOZ3Q8TDC0 251 aa14.05□□□□□ -0.16
COMMD4-222ENST00000568034 TMEM68Q96MH6 324 aa14.05□□□□□ -0.16
COMMD4-222ENST00000568034 PHB2Q99623 299 aa14.05□□□□□ -0.16
COMMD4-222ENST00000568034 CITED2Q99967 270 aaPredicted RBP14.05□□□□□ -0.16
COMMD4-222ENST00000568034 KLK15Q9H2R5 256 aa14.05□□□□□ -0.16
COMMD4-222ENST00000568034 CACNG5Q9UF02 275 aa14.05□□□□□ -0.16
COMMD4-222ENST00000568034 ZNF257Q9Y2Q1 563 aa14.05□□□□□ -0.16
COMMD4-222ENST00000568034 INMT-MINDY4F8WBC2 141 aa14.04□□□□□ -0.16
COMMD4-222ENST00000568034 ST8SIA3O43173 380 aa14.04□□□□□ -0.16
COMMD4-222ENST00000568034 ELANEP08246 267 aa14.04□□□□□ -0.16
COMMD4-222ENST00000568034 TEX38Q6PEX7 206 aa14.04□□□□□ -0.16
COMMD4-222ENST00000568034 SHISA2Q6UWI4 295 aa14.04□□□□□ -0.16
COMMD4-222ENST00000568034 C19orf35Q6ZS72 473 aa14.04□□□□□ -0.16
COMMD4-222ENST00000568034 TTC9CQ8N5M4 171 aa14.04□□□□□ -0.16
COMMD4-222ENST00000568034 COMMD1Q8N668 190 aa14.04□□□□□ -0.16
COMMD4-222ENST00000568034 OR5T1Q8NG75 326 aa14.04□□□□□ -0.16
COMMD4-222ENST00000568034 OR10W1Q8NGF6 305 aa14.04□□□□□ -0.16
COMMD4-222ENST00000568034 OR5M8Q8NGP6 311 aa14.04□□□□□ -0.16
COMMD4-222ENST00000568034 ZNF431Q8TF32 576 aaPredicted RBP14.04□□□□□ -0.16
COMMD4-222ENST00000568034 FKBP11Q9NYL4 201 aa14.04□□□□□ -0.16
COMMD4-222ENST00000568034 RPLP1P05386 114 aaKnown RBP14.03□□□□□ -0.16
COMMD4-222ENST00000568034 TRAPPC2P0DI81 140 aa14.03□□□□□ -0.16
COMMD4-222ENST00000568034 TRAPPC2BP0DI82 140 aa14.03□□□□□ -0.16
COMMD4-222ENST00000568034 HSPE1P61604 102 aaKnown RBP14.03□□□□□ -0.16
COMMD4-222ENST00000568034 KIAA0141Q14154 515 aaPredicted RBP14.03□□□□□ -0.16
COMMD4-222ENST00000568034 THOC7Q6I9Y2 204 aaKnown RBP14.03□□□□□ -0.16
COMMD4-222ENST00000568034 COQ8AQ8NI60 647 aa14.03□□□□□ -0.16
COMMD4-222ENST00000568034 SRSF8Q9BRL6 282 aaKnown RBP14.03□□□□□ -0.16
COMMD4-222ENST00000568034 COA4Q9NYJ1 87 aa14.03□□□□□ -0.16
COMMD4-222ENST00000568034 PIGBOS1A0A0B4J2F0 54 aa14.02□□□□□ -0.17
COMMD4-222ENST00000568034 NPIPB5A8MRT5 1133 aa14.02□□□□□ -0.17
COMMD4-222ENST00000568034 ADAP1O75689 374 aa14.02□□□□□ -0.17
COMMD4-222ENST00000568034 BRI3O95415 125 aa14.02□□□□□ -0.17
COMMD4-222ENST00000568034 CRYGCP07315 174 aa14.02□□□□□ -0.17
COMMD4-222ENST00000568034 HOXB5P09067 269 aa14.02□□□□□ -0.17
COMMD4-222ENST00000568034 CTRB1P17538 263 aa14.02□□□□□ -0.17
COMMD4-222ENST00000568034 PRCDQ00LT1 54 aa14.02□□□□□ -0.17
COMMD4-222ENST00000568034 WT1-ASQ06250 92 aa14.02□□□□□ -0.17
COMMD4-222ENST00000568034 GGNBP1Q5YKI7 109 aa14.02□□□□□ -0.17
COMMD4-222ENST00000568034 CTRB2Q6GPI1 263 aa14.02□□□□□ -0.17
COMMD4-222ENST00000568034 TMED3Q9Y3Q3 217 aa14.02□□□□□ -0.17
COMMD4-222ENST00000568034 MPTX1A8MV57 137 aa14.01□□□□□ -0.17
COMMD4-222ENST00000568034 PITX3O75364 302 aa14.01□□□□□ -0.17
COMMD4-222ENST00000568034 RBMXL2O75526 392 aaKnown RBP14.01□□□□□ -0.17
COMMD4-222ENST00000568034 REG1AP05451 166 aa14.01□□□□□ -0.17
COMMD4-222ENST00000568034 SULT1A3P0DMM9 295 aa14.01□□□□□ -0.17
COMMD4-222ENST00000568034 SULT1A4P0DMN0 295 aa14.01□□□□□ -0.17
COMMD4-222ENST00000568034 PSMB6P28072 239 aa14.01□□□□□ -0.17
COMMD4-222ENST00000568034 SMCO1Q147U7 214 aa14.01□□□□□ -0.17
COMMD4-222ENST00000568034 PDLIM3Q53GG5 364 aaPredicted RBP14.01□□□□□ -0.17
COMMD4-222ENST00000568034 SPINK9Q5DT21 86 aa14.01□□□□□ -0.17
COMMD4-222ENST00000568034 CXorf66Q5JRM2 361 aaPredicted RBP14.01□□□□□ -0.17
COMMD4-222ENST00000568034 C18orf65Q6ZTR6 163 aa14.01□□□□□ -0.17
COMMD4-222ENST00000568034 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.01□□□□□ -0.17
COMMD4-222ENST00000568034 TRRAPQ9Y4A5 3859 aa14.01□□□□□ -0.17
COMMD4-222ENST00000568034 A0A1B0GU03 582 aa14□□□□□ -0.17
COMMD4-222ENST00000568034 TCRBV4S1A1TA0A5B7 111 aa14□□□□□ -0.17
COMMD4-222ENST00000568034 H3BUA1 57 aa14□□□□□ -0.17
COMMD4-222ENST00000568034 PRH1P02810 166 aa14□□□□□ -0.17
COMMD4-222ENST00000568034 PF4V1P10720 104 aa14□□□□□ -0.17
COMMD4-222ENST00000568034 SLC25A6P12236 298 aa14□□□□□ -0.17
COMMD4-222ENST00000568034 RAB9AP51151 201 aa14□□□□□ -0.17
COMMD4-222ENST00000568034 RPL23AP62750 156 aaKnown RBP14□□□□□ -0.17
COMMD4-222ENST00000568034 KLK9Q2XQG4 91 aa14□□□□□ -0.17
COMMD4-222ENST00000568034 NDUFA11Q86Y39 141 aa14□□□□□ -0.17
COMMD4-222ENST00000568034 OR52E5Q8NH55 327 aa14□□□□□ -0.17
COMMD4-222ENST00000568034 HINT2Q9BX68 163 aa14□□□□□ -0.17
COMMD4-222ENST00000568034 KLK9Q9UKQ9 250 aa14□□□□□ -0.17
COMMD4-222ENST00000568034 DMRT1Q9Y5R6 373 aa14□□□□□ -0.17
COMMD4-222ENST00000568034 TSSC4Q9Y5U2 329 aaPredicted RBP14□□□□□ -0.17
COMMD4-222ENST00000568034 INS-IGF2F8WCM5 200 aa13.99□□□□□ -0.17
COMMD4-222ENST00000568034 PRAF2O60831 178 aa13.99□□□□□ -0.17
COMMD4-222ENST00000568034 OR13C7P0DN81 318 aa13.99□□□□□ -0.17
COMMD4-222ENST00000568034 DEFA5Q01523 94 aa13.99□□□□□ -0.17
COMMD4-222ENST00000568034 HSD17B13Q7Z5P4 300 aaPredicted RBP13.99□□□□□ -0.17
COMMD4-222ENST00000568034 C12orf45Q8N5I9 185 aaPredicted RBP13.99□□□□□ -0.17
COMMD4-222ENST00000568034 MS4A10Q96PG2 267 aa13.99□□□□□ -0.17
COMMD4-222ENST00000568034 FANCD2OSQ96PS1 177 aa13.99□□□□□ -0.17
COMMD4-222ENST00000568034 TRBV9A0A0B4J1U6 114 aa13.98□□□□□ -0.17
COMMD4-222ENST00000568034 SNRPGP15A8MWD9 76 aa13.98□□□□□ -0.17
COMMD4-222ENST00000568034 IFNA17P01571 189 aa13.98□□□□□ -0.17
COMMD4-222ENST00000568034 SPCS3P61009 180 aa13.98□□□□□ -0.17
COMMD4-222ENST00000568034 OXA1LQ15070 435 aa13.98□□□□□ -0.17
COMMD4-222ENST00000568034 RGS21Q2M5E4 152 aa13.98□□□□□ -0.17
COMMD4-222ENST00000568034 C11orf87Q6NUJ2 197 aa13.98□□□□□ -0.17
COMMD4-222ENST00000568034 OR2C3Q8N628 320 aa13.98□□□□□ -0.17
COMMD4-222ENST00000568034 ZNF491Q8N8L2 437 aa13.98□□□□□ -0.17
COMMD4-222ENST00000568034 SLA2Q9H6Q3 261 aa13.98□□□□□ -0.17
COMMD4-222ENST00000568034 PLEKHA3Q9HB20 300 aa13.98□□□□□ -0.17
COMMD4-222ENST00000568034 ZFP57Q9NU63 452 aa13.98□□□□□ -0.17
COMMD4-222ENST00000568034 HSPB7Q9UBY9 170 aa13.98□□□□□ -0.17
COMMD4-222ENST00000568034 IGLV11-55A0A075B6I3 123 aa13.97□□□□□ -0.17
COMMD4-222ENST00000568034 A0A1W2PRX2 142 aa13.97□□□□□ -0.17
COMMD4-222ENST00000568034 C7orf66A4D0T2 115 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms