RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 CHRNB4P30926 498 aa4.33□□□□□ -1.72
CAPN3-217ENST00000567817 PPP1CCP36873 323 aaKnown RBP4.33□□□□□ -1.72
CAPN3-217ENST00000567817 FHITP49789 147 aa4.33□□□□□ -1.72
CAPN3-217ENST00000567817 RAB7AP51149 207 aa4.33□□□□□ -1.72
CAPN3-217ENST00000567817 ATP5IP56385 69 aaPredicted RBP4.33□□□□□ -1.72
CAPN3-217ENST00000567817 GNB2P62879 340 aa4.33□□□□□ -1.72
CAPN3-217ENST00000567817 SSX2Q16385 188 aa4.33□□□□□ -1.72
CAPN3-217ENST00000567817 C3AR1Q16581 482 aa4.33□□□□□ -1.72
CAPN3-217ENST00000567817 VWC2Q2TAL6 325 aa4.33□□□□□ -1.72
CAPN3-217ENST00000567817 DEFB113Q30KQ7 82 aa4.33□□□□□ -1.72
CAPN3-217ENST00000567817 ZNF585BQ52M93 769 aa4.33□□□□□ -1.72
CAPN3-217ENST00000567817 PDLIM3Q53GG5 364 aaPredicted RBP4.33□□□□□ -1.72
CAPN3-217ENST00000567817 KRBOX4Q5JUW0 171 aa4.33□□□□□ -1.72
CAPN3-217ENST00000567817 DNLZQ5SXM8 178 aa4.33□□□□□ -1.72
CAPN3-217ENST00000567817 HEPN1Q6WQI6 88 aa4.33□□□□□ -1.72
CAPN3-217ENST00000567817 ACP7Q6ZNF0 438 aa4.33□□□□□ -1.72
CAPN3-217ENST00000567817 WDR86Q86TI4 376 aa4.33□□□□□ -1.72
CAPN3-217ENST00000567817 ZNF429Q86V71 674 aa4.33□□□□□ -1.72
CAPN3-217ENST00000567817 C1orf87Q8N0U7 546 aa4.33□□□□□ -1.72
CAPN3-217ENST00000567817 ZNF525Q8N782 197 aa4.33□□□□□ -1.72
CAPN3-217ENST00000567817 ZNF709Q8N972 641 aa4.33□□□□□ -1.72
CAPN3-217ENST00000567817 OR10P1Q8NGE3 313 aa4.33□□□□□ -1.72
CAPN3-217ENST00000567817 OR52E5Q8NH55 327 aa4.33□□□□□ -1.72
CAPN3-217ENST00000567817 TAF15Q92804 592 aaKnown RBP eCLIP4.33□□□□□ -1.72
CAPN3-217ENST00000567817 MUCL1Q96DR8 90 aa4.33□□□□□ -1.72
CAPN3-217ENST00000567817 BSCL2Q96G97 398 aaPredicted RBP4.33□□□□□ -1.72
CAPN3-217ENST00000567817 URB1-AS1Q96HZ7 61 aa4.33□□□□□ -1.72
CAPN3-217ENST00000567817 ZNF479Q96JC4 524 aa4.33□□□□□ -1.72
CAPN3-217ENST00000567817 ZNF488Q96MN9 340 aa4.33□□□□□ -1.72
CAPN3-217ENST00000567817 C12orf57Q99622 126 aa4.33□□□□□ -1.72
CAPN3-217ENST00000567817 AGMATQ9BSE5 352 aa4.33□□□□□ -1.72
CAPN3-217ENST00000567817 PARP12Q9H0J9 701 aaKnown RBP4.33□□□□□ -1.72
CAPN3-217ENST00000567817 CHODLQ9H9P2 273 aa4.33□□□□□ -1.72
CAPN3-217ENST00000567817 SEPSECSQ9HD40 501 aaKnown RBP4.33□□□□□ -1.72
CAPN3-217ENST00000567817 BEX4Q9NWD9 120 aaPredicted RBP4.33□□□□□ -1.72
CAPN3-217ENST00000567817 HIF1ANQ9NWT6 349 aa4.33□□□□□ -1.72
CAPN3-217ENST00000567817 OR1A1Q9P1Q5 309 aa4.33□□□□□ -1.72
CAPN3-217ENST00000567817 TINAGQ9UJW2 476 aa4.33□□□□□ -1.72
CAPN3-217ENST00000567817 PPP1R3CQ9UQK1 317 aa4.33□□□□□ -1.72
CAPN3-217ENST00000567817 LIPGQ9Y5X9 500 aa4.33□□□□□ -1.72
CAPN3-217ENST00000567817 PUS1Q9Y606 427 aaKnown RBP eCLIP4.33□□□□□ -1.72
CAPN3-217ENST00000567817 TLN2Q9Y4G6 2542 aa4.33□□□□□ -1.72
CAPN3-217ENST00000567817 TRBV24-1A0A075B6N3 115 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 CTXND1A0A1B0GTU2 59 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 A0A1W2PR80 420 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 MAP1LC3B2A6NCE7 125 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 OR5H1A6NKK0 313 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 CLDN34H7C241 214 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 YPEL1O60688 119 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 CYB5R3P00387 301 aaPredicted RBP4.32□□□□□ -1.72
CAPN3-217ENST00000567817 HPRT1P00492 218 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 IGKV1-39P01597 117 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 IGKV1-5P01602 117 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 IGHV2-5P01817 119 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 OPN1MWP04001 364 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 IGKV1D-39P04432 117 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 OPN1MW2P0DN77 364 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 OPN1MW3P0DN78 364 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 OR13C7P0DN81 318 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 RPL35P42766 123 aaKnown RBP4.32□□□□□ -1.72
CAPN3-217ENST00000567817 GABRA2P47869 451 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 OR3A1P47881 315 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 GLIPR1P48060 266 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 PSMB3P49720 205 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 RND2P52198 227 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 SELENOVP59797 346 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 ERVK-16P61578 105 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 DLK1P80370 383 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 SLC38A11Q08AI6 406 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 EIF4EBP1Q13541 118 aaPredicted RBP4.32□□□□□ -1.72
CAPN3-217ENST00000567817 SPANXN5Q5MJ07 72 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 TIMM23BQ5SRD1 257 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 SPATA46Q5T0L3 261 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 WDR82Q6UXN9 313 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 Q71RC1 249 aaPredicted RBP4.32□□□□□ -1.72
CAPN3-217ENST00000567817 H2BFWTQ7Z2G1 175 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 ODF3L1Q8IXM7 274 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 BATF2Q8N1L9 274 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 FAM24BQ8N5W8 94 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 GCSAMQ8N6F7 178 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 CYB561D1Q8N8Q1 229 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 CNEP1R1Q8N9A8 125 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.32□□□□□ -1.72
CAPN3-217ENST00000567817 WFDC11Q8NEX6 87 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 CORO2AQ92828 525 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 RAB1CQ92928 201 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 RAB39BQ96DA2 213 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 ADTRPQ96IZ2 230 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 YPEL4Q96NS1 127 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 YPEL2Q96QA6 119 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 ACTR3CQ9C0K3 210 aaPredicted RBP4.32□□□□□ -1.72
CAPN3-217ENST00000567817 MAP1LC3BQ9GZQ8 125 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 OR2D2Q9H210 308 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 RPRMQ9NS64 109 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 OR6C3Q9NZP0 311 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 NAT8Q9UHE5 227 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 SH3BGRL2Q9UJC5 107 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 EML6Q6ZMW3 1958 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 AKAP6Q13023 2319 aa4.32□□□□□ -1.72
CAPN3-217ENST00000567817 KIAA1549Q9HCM3 1950 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms