RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 A0A1B0GW64 132 aa8.5□□□□□ -1.05
CDH3-206ENST00000567674 CGB1A6NKQ9 187 aa8.5□□□□□ -1.05
CDH3-206ENST00000567674 CTDSPLO15194 276 aa8.5□□□□□ -1.05
CDH3-206ENST00000567674 RBMXL2O75526 392 aaKnown RBP8.5□□□□□ -1.05
CDH3-206ENST00000567674 S1PR2O95136 353 aa8.5□□□□□ -1.05
CDH3-206ENST00000567674 SMIM18P0DKX4 95 aa8.5□□□□□ -1.05
CDH3-206ENST00000567674 C8orf88P0DMB2 117 aa8.5□□□□□ -1.05
CDH3-206ENST00000567674 HLA-DMAP28067 261 aa8.5□□□□□ -1.05
CDH3-206ENST00000567674 ARL3P36405 182 aa8.5□□□□□ -1.05
CDH3-206ENST00000567674 SURF2Q15527 256 aaPredicted RBP8.5□□□□□ -1.05
CDH3-206ENST00000567674 RNASE10Q5GAN6 216 aaKnown RBP8.5□□□□□ -1.05
CDH3-206ENST00000567674 SSX9Q7RTT3 188 aa8.5□□□□□ -1.05
CDH3-206ENST00000567674 GPR141Q7Z602 305 aa8.5□□□□□ -1.05
CDH3-206ENST00000567674 LHFPL1Q86WI0 220 aa8.5□□□□□ -1.05
CDH3-206ENST00000567674 TMEM229BQ8NBD8 167 aa8.5□□□□□ -1.05
CDH3-206ENST00000567674 FCAMRQ8WWV6 532 aa8.5□□□□□ -1.05
CDH3-206ENST00000567674 BSCL2Q96G97 398 aaPredicted RBP8.5□□□□□ -1.05
CDH3-206ENST00000567674 TXN2Q99757 166 aa8.5□□□□□ -1.05
CDH3-206ENST00000567674 TM2D3Q9BRN9 247 aa8.5□□□□□ -1.05
CDH3-206ENST00000567674 SLC2A8Q9NY64 477 aa8.5□□□□□ -1.05
CDH3-206ENST00000567674 PIGBOS1A0A0B4J2F0 54 aa8.49□□□□□ -1.05
CDH3-206ENST00000567674 MEIS3P1A6NDR6 274 aa8.49□□□□□ -1.05
CDH3-206ENST00000567674 FAM25AB3EWG3 89 aa8.49□□□□□ -1.05
CDH3-206ENST00000567674 FAM25CB3EWG5 89 aa8.49□□□□□ -1.05
CDH3-206ENST00000567674 FAM25GB3EWG6 89 aa8.49□□□□□ -1.05
CDH3-206ENST00000567674 GABARAPH6UMI1 98 aa8.49□□□□□ -1.05
CDH3-206ENST00000567674 HPGDSO60760 199 aa8.49□□□□□ -1.05
CDH3-206ENST00000567674 NDUFB8O95169 186 aa8.49□□□□□ -1.05
CDH3-206ENST00000567674 TRBV12-3P01733 135 aa8.49□□□□□ -1.05
CDH3-206ENST00000567674 CD74P04233 296 aa8.49□□□□□ -1.05
CDH3-206ENST00000567674 RLN1P04808 185 aa8.49□□□□□ -1.05
CDH3-206ENST00000567674 CLEC3BP05452 202 aa8.49□□□□□ -1.05
CDH3-206ENST00000567674 FCER2P06734 321 aa8.49□□□□□ -1.05
CDH3-206ENST00000567674 FRMD6-AS1P0C7T7 363 aa8.49□□□□□ -1.05
CDH3-206ENST00000567674 IGHV4-30-4P0DP06 118 aa8.49□□□□□ -1.05
CDH3-206ENST00000567674 AREGP15514 252 aa8.49□□□□□ -1.05
CDH3-206ENST00000567674 CBLN1P23435 193 aa8.49□□□□□ -1.05
CDH3-206ENST00000567674 LPAR6P43657 344 aa8.49□□□□□ -1.05
CDH3-206ENST00000567674 TAS2R19P59542 299 aa8.49□□□□□ -1.05
CDH3-206ENST00000567674 MEF2DQ14814 521 aa8.49□□□□□ -1.05
CDH3-206ENST00000567674 DEFB114Q30KQ6 69 aa8.49□□□□□ -1.05
CDH3-206ENST00000567674 ZNF114Q8NC26 417 aa8.49□□□□□ -1.05
CDH3-206ENST00000567674 OR1P1Q8NH06 330 aa8.49□□□□□ -1.05
CDH3-206ENST00000567674 TERB2Q8NHR7 220 aa8.49□□□□□ -1.05
CDH3-206ENST00000567674 ZNF502Q8TBZ5 544 aa8.49□□□□□ -1.05
CDH3-206ENST00000567674 CCDC140Q96MF4 163 aa8.49□□□□□ -1.05
CDH3-206ENST00000567674 ZNF436Q9C0F3 470 aaPredicted RBP8.49□□□□□ -1.05
CDH3-206ENST00000567674 MRPL27Q9P0M9 148 aaKnown RBP8.49□□□□□ -1.05
CDH3-206ENST00000567674 UFC1Q9Y3C8 167 aa8.49□□□□□ -1.05
CDH3-206ENST00000567674 F11RQ9Y624 299 aaKnown RBP8.49□□□□□ -1.05
CDH3-206ENST00000567674 C2orf70A6NJV1 201 aa8.48□□□□□ -1.05
CDH3-206ENST00000567674 C15orf61A6NNL5 157 aa8.48□□□□□ -1.05
CDH3-206ENST00000567674 K7EMT4 169 aa8.48□□□□□ -1.05
CDH3-206ENST00000567674 KRASP01116 189 aa8.48□□□□□ -1.05
CDH3-206ENST00000567674 PRH1P02810 166 aa8.48□□□□□ -1.05
CDH3-206ENST00000567674 CD5P06127 495 aa8.48□□□□□ -1.05
CDH3-206ENST00000567674 APELAP0DMC3 54 aa8.48□□□□□ -1.05
CDH3-206ENST00000567674 FOLR2P14207 255 aa8.48□□□□□ -1.05
CDH3-206ENST00000567674 TBC1D26Q86UD7 250 aa8.48□□□□□ -1.05
CDH3-206ENST00000567674 SNX29P2Q8IUI4 249 aa8.48□□□□□ -1.05
CDH3-206ENST00000567674 SBSPONQ8IVN8 264 aa8.48□□□□□ -1.05
CDH3-206ENST00000567674 FAM219AQ8IW50 185 aa8.48□□□□□ -1.05
CDH3-206ENST00000567674 DEDD2Q8WXF8 326 aa8.48□□□□□ -1.05
CDH3-206ENST00000567674 SEC22AQ96IW7 307 aa8.48□□□□□ -1.05
CDH3-206ENST00000567674 FAM110AQ9BQ89 295 aa8.48□□□□□ -1.05
CDH3-206ENST00000567674 FXYD6Q9H0Q3 95 aa8.48□□□□□ -1.05
CDH3-206ENST00000567674 CCDC59Q9P031 241 aaKnown RBP8.48□□□□□ -1.05
CDH3-206ENST00000567674 OR51B2Q9Y5P1 312 aa8.48□□□□□ -1.05
CDH3-206ENST00000567674 RYR2Q92736 4967 aa8.48□□□□□ -1.05
CDH3-206ENST00000567674 NDUFA4O00483 81 aa8.47□□□□□ -1.05
CDH3-206ENST00000567674 OR2C1O95371 312 aa8.47□□□□□ -1.05
CDH3-206ENST00000567674 OR13C7P0DN81 318 aa8.47□□□□□ -1.05
CDH3-206ENST00000567674 RPL5P46777 297 aaKnown RBP8.47□□□□□ -1.05
CDH3-206ENST00000567674 HSPE1P61604 102 aaKnown RBP8.47□□□□□ -1.05
CDH3-206ENST00000567674 WT1-ASQ06250 92 aa8.47□□□□□ -1.05
CDH3-206ENST00000567674 PLET1Q6UQ28 207 aa8.47□□□□□ -1.05
CDH3-206ENST00000567674 CLEC19AQ6UXS0 136 aa8.47□□□□□ -1.05
CDH3-206ENST00000567674 LINC00322Q6ZN03 302 aaPredicted RBP8.47□□□□□ -1.05
CDH3-206ENST00000567674 SLC16A13Q7RTY0 426 aa8.47□□□□□ -1.05
CDH3-206ENST00000567674 H2BFWTQ7Z2G1 175 aa8.47□□□□□ -1.05
CDH3-206ENST00000567674 CCDC71LQ8N9Z2 235 aa8.47□□□□□ -1.05
CDH3-206ENST00000567674 OR4A16Q8NH70 328 aa8.47□□□□□ -1.05
CDH3-206ENST00000567674 DYNLRB2Q8TF09 96 aa8.47□□□□□ -1.05
CDH3-206ENST00000567674 CITED4Q96RK1 184 aa8.47□□□□□ -1.05
CDH3-206ENST00000567674 GPHA2Q96T91 129 aa8.47□□□□□ -1.05
CDH3-206ENST00000567674 SPATA25Q9BR10 227 aa8.47□□□□□ -1.05
CDH3-206ENST00000567674 EXTL2Q9UBQ6 330 aa8.47□□□□□ -1.05
CDH3-206ENST00000567674 KLK11Q9UBX7 282 aa8.47□□□□□ -1.05
CDH3-206ENST00000567674 HUWE1Q7Z6Z7 4374 aaKnown RBP8.47□□□□□ -1.05
CDH3-206ENST00000567674 STAB2Q8WWQ8 2551 aa8.47□□□□□ -1.05
CDH3-206ENST00000567674 C15orf62A8K5M9 175 aa8.46□□□□□ -1.06
CDH3-206ENST00000567674 ZNF785A8K8V0 405 aa8.46□□□□□ -1.06
CDH3-206ENST00000567674 CORTO00230 105 aa8.46□□□□□ -1.06
CDH3-206ENST00000567674 TGOLN2O43493 480 aa8.46□□□□□ -1.06
CDH3-206ENST00000567674 HLA-AP01891 365 aaKnown RBP8.46□□□□□ -1.06
CDH3-206ENST00000567674 G6PCP35575 357 aa8.46□□□□□ -1.06
CDH3-206ENST00000567674 CMC4P56277 68 aaPredicted RBP8.46□□□□□ -1.06
CDH3-206ENST00000567674 ERHP84090 104 aaKnown RBP8.46□□□□□ -1.06
CDH3-206ENST00000567674 PRCDQ00LT1 54 aa8.46□□□□□ -1.06
CDH3-206ENST00000567674 RELQ04864 619 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms