RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 IGLV3-27P01718 113 aa2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 TRGV3P03979 118 aa2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 C8GP07360 202 aa2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 ZNF705DP0CH99 300 aaPredicted RBP2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 CNTFRP26992 372 aa2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 GABRA4P48169 554 aa2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 LCN6P62502 163 aa2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 FCN2Q15485 313 aa2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 SURF2Q15527 256 aaPredicted RBP2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 LPAL2Q16609 132 aa2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 MRGPRG-AS1Q2M3A8 158 aa2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 DEFB116Q30KQ4 102 aa2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 PLPPR5Q32ZL2 321 aa2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 SP6Q3SY56 376 aa2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 CCDC153Q494R4 210 aa2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 TMEM128Q5BJH2 165 aa2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 SAMD13Q5VXD3 122 aa2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 DHFR2Q86XF0 187 aa2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 AMN1Q8IY45 258 aa2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 MKXQ8IYA7 352 aa2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 ZNF615Q8N8J6 731 aa2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 OR8A1Q8NGG7 326 aa2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 OR9A2Q8NGT5 310 aa2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 OR4K13Q8NH42 304 aa2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 OR52N1Q8NH53 320 aa2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 SLC25A40Q8TBP6 338 aa2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 FRZBQ92765 325 aa2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 CMBLQ96DG6 245 aa2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 ERMAPQ96PL5 475 aaPredicted RBP2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 RSPO3Q9BXY4 272 aaPredicted RBP2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 C11orf68Q9H3H3 251 aaKnown RBP2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 MED11Q9P086 117 aa2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 SLC23A2Q9UGH3 650 aa2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 GINS2Q9Y248 185 aa2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 MRPS16Q9Y3D3 137 aaKnown RBP2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 DOCK3Q8IZD9 2030 aa2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 EIF2AK4Q9P2K8 1649 aaKnown RBP2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 SPTBN4Q9H254 2564 aa2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 CDC42BPGQ6DT37 1551 aa2.23□□□□□ -2.05
HERPUD1-211ENST00000566550 TRPM3Q9HCF6 1732 aaPredicted RBP2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 NAV1Q8NEY1 1877 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 ZFHX2Q9C0A1 2572 aaPredicted RBP2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 PRXQ9BXM0 1461 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 TRBV20OR9-2A0A075B6H5 130 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 IGHV3-21A0A0B4J1V1 117 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 IGHV3-43A0A0B4J1X8 118 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 A0A0J9YY10 115 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 A0A1B0GX78 115 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 LEUTXA8MZ59 168 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 LST1O00453 97 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 ORC5O43913 435 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 PFDN1O60925 122 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 BANF1O75531 89 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 CCNKO75909 580 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 FSTL3O95633 263 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 CCNE2O96020 404 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 CRABP1P29762 137 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 S100A7P31151 101 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 PSMD8P48556 350 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 TAF6P49848 677 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 RWDD2BP57060 319 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 TNFAIP6P98066 277 aaPredicted RBP2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 CAV1Q03135 178 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 BAMBIQ13145 260 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 APOFQ13790 326 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 MMDQ15546 238 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 ZNF79Q15937 498 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 C12orf74Q32Q52 190 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 GLT8D1Q68CQ7 371 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 SMARCD3Q6STE5 483 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 UNQ9165/PRO28630Q6UXU0 137 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 SCXQ7RTU7 201 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 SLC22A24Q8N4F4 322 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 MIR7-3HGQ8N6C7 128 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 Q8N7P7 452 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 DAND5Q8N907 189 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 ZFP62Q8NB50 900 aaPredicted RBP2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 MAPK1IP1LQ8NDC0 245 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 SGMS2Q8NHU3 365 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 SKA2Q8WVK7 121 aaPredicted RBP2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 MBD3L1Q8WWY6 194 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 RMND5BQ96G75 393 aaPredicted RBP2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 TSPAN32Q96QS1 320 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 FAM60AQ9NP50 221 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 TMEM138Q9NPI0 162 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 LYRM2Q9NU23 88 aaPredicted RBP2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 ACER3Q9NUN7 267 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 ZNF586Q9NXT0 402 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 GSKIPQ9P0R6 139 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 CYSLTR1Q9Y271 337 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 ERGIC3Q9Y282 383 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 PHLDA3Q9Y5J5 127 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 RFNGQ9Y644 331 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 TMEM56-RWDD3S4R434 201 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 SCN11AQ9UI33 1791 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 KDM6AO15550 1401 aaPredicted RBP2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 KIAA1551Q9HCM1 1747 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 NUP155O75694 1391 aa2.22□□□□□ -2.05
HERPUD1-211ENST00000566550 TEP1Q99973 2627 aaKnown RBP2.21□□□□□ -2.05
HERPUD1-211ENST00000566550 YLPM1P49750 1951 aaKnown RBP2.21□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms