RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 AP2S1P53680 142 aaPredicted RBP15.25■□□□□ 0.03
CSPG4P13-201ENST00000565545 RPP30P78346 268 aaKnown RBP15.25■□□□□ 0.03
CSPG4P13-201ENST00000565545 BAXQ07812 192 aa15.25■□□□□ 0.03
CSPG4P13-201ENST00000565545 MMDQ15546 238 aa15.25■□□□□ 0.03
CSPG4P13-201ENST00000565545 PRSS8Q16651 343 aa15.25■□□□□ 0.03
CSPG4P13-201ENST00000565545 PPP1R27Q86WC6 154 aa15.25■□□□□ 0.03
CSPG4P13-201ENST00000565545 OR1L8Q8NGR8 309 aa15.25■□□□□ 0.03
CSPG4P13-201ENST00000565545 RBMXL1Q96E39 390 aaKnown RBP15.25■□□□□ 0.03
CSPG4P13-201ENST00000565545 GON7Q9BXV9 100 aa15.25■□□□□ 0.03
CSPG4P13-201ENST00000565545 HIPK2Q9H2X6 1198 aa15.25■□□□□ 0.03
CSPG4P13-201ENST00000565545 ZNF430Q9H8G1 570 aaPredicted RBP15.25■□□□□ 0.03
CSPG4P13-201ENST00000565545 ENY2Q9NPA8 101 aa15.25■□□□□ 0.03
CSPG4P13-201ENST00000565545 A0A0U1RQK1 487 aa15.24■□□□□ 0.03
CSPG4P13-201ENST00000565545 FAM24AA6NFZ4 105 aa15.24■□□□□ 0.03
CSPG4P13-201ENST00000565545 MSGN1A6NI15 193 aa15.24■□□□□ 0.03
CSPG4P13-201ENST00000565545 BCL2L11O43521 198 aa15.24■□□□□ 0.03
CSPG4P13-201ENST00000565545 SCAF4O95104 1147 aaKnown RBP15.24■□□□□ 0.03
CSPG4P13-201ENST00000565545 TMEM50AO95807 157 aa15.24■□□□□ 0.03
CSPG4P13-201ENST00000565545 IAPPP10997 89 aa15.24■□□□□ 0.03
CSPG4P13-201ENST00000565545 TMEM11P17152 192 aa15.24■□□□□ 0.03
CSPG4P13-201ENST00000565545 CNTFRP26992 372 aa15.24■□□□□ 0.03
CSPG4P13-201ENST00000565545 PRCDQ00LT1 54 aa15.24■□□□□ 0.03
CSPG4P13-201ENST00000565545 TMEM252Q8N6L7 170 aa15.24■□□□□ 0.03
CSPG4P13-201ENST00000565545 ARPC5LQ9BPX5 153 aa15.24■□□□□ 0.03
CSPG4P13-201ENST00000565545 INS-IGF2F8WCM5 200 aa15.23■□□□□ 0.03
CSPG4P13-201ENST00000565545 ACTL6BO94805 426 aa15.23■□□□□ 0.03
CSPG4P13-201ENST00000565545 PAX6P26367 422 aa15.23■□□□□ 0.03
CSPG4P13-201ENST00000565545 VDAC2P45880 294 aaPredicted RBP15.23■□□□□ 0.03
CSPG4P13-201ENST00000565545 ATP5IP56385 69 aaPredicted RBP15.23■□□□□ 0.03
CSPG4P13-201ENST00000565545 HNF4GQ14541 408 aa15.23■□□□□ 0.03
CSPG4P13-201ENST00000565545 PLGLAQ15195 96 aa15.23■□□□□ 0.03
CSPG4P13-201ENST00000565545 C9orf139Q6ZV77 190 aa15.23■□□□□ 0.03
CSPG4P13-201ENST00000565545 STX12Q86Y82 276 aa15.23■□□□□ 0.03
CSPG4P13-201ENST00000565545 FBXL15Q9H469 300 aa15.23■□□□□ 0.03
CSPG4P13-201ENST00000565545 PLEKHA3Q9HB20 300 aa15.23■□□□□ 0.03
CSPG4P13-201ENST00000565545 A0A1W2PN81 502 aa15.22■□□□□ 0.03
CSPG4P13-201ENST00000565545 KCNAB3O43448 404 aa15.22■□□□□ 0.03
CSPG4P13-201ENST00000565545 CHRNA7P36544 502 aa15.22■□□□□ 0.03
CSPG4P13-201ENST00000565545 HOXA1P49639 335 aaPredicted RBP15.22■□□□□ 0.03
CSPG4P13-201ENST00000565545 SULT1A1P50225 295 aa15.22■□□□□ 0.03
CSPG4P13-201ENST00000565545 F2RL1P55085 397 aa15.22■□□□□ 0.03
CSPG4P13-201ENST00000565545 EWSR1Q01844 656 aaKnown RBP eCLIP15.22■□□□□ 0.03
CSPG4P13-201ENST00000565545 MRGPRG-AS1Q2M3A8 158 aa15.22■□□□□ 0.03
CSPG4P13-201ENST00000565545 LRRC75BQ2VPJ9 315 aa15.22■□□□□ 0.03
CSPG4P13-201ENST00000565545 MRPL41Q8IXM3 137 aaKnown RBP15.22■□□□□ 0.03
CSPG4P13-201ENST00000565545 ZDHHC16Q969W1 377 aa15.22■□□□□ 0.03
CSPG4P13-201ENST00000565545 SLA2Q9H6Q3 261 aa15.22■□□□□ 0.03
CSPG4P13-201ENST00000565545 HEYLQ9NQ87 328 aaPredicted RBP15.22■□□□□ 0.03
CSPG4P13-201ENST00000565545 NDUFA4L2Q9NRX3 87 aa15.22■□□□□ 0.03
CSPG4P13-201ENST00000565545 STRAPQ9Y3F4 350 aaKnown RBP15.22■□□□□ 0.03
CSPG4P13-201ENST00000565545 U3KQ87 197 aa15.22■□□□□ 0.03
CSPG4P13-201ENST00000565545 TNCP24821 2201 aa15.21■□□□□ 0.03
CSPG4P13-201ENST00000565545 IGSF23A1L1A6 192 aa15.21■□□□□ 0.03
CSPG4P13-201ENST00000565545 CD24P25063 80 aa15.21■□□□□ 0.03
CSPG4P13-201ENST00000565545 C5orf64Q2M2E5 130 aa15.21■□□□□ 0.03
CSPG4P13-201ENST00000565545 SPANXN5Q5MJ07 72 aa15.21■□□□□ 0.03
CSPG4P13-201ENST00000565545 TMEM14EPQ6UXP3 125 aa15.21■□□□□ 0.03
CSPG4P13-201ENST00000565545 SLC51BQ86UW2 128 aa15.21■□□□□ 0.03
CSPG4P13-201ENST00000565545 TPSG1Q9NRR2 321 aa15.21■□□□□ 0.03
CSPG4P13-201ENST00000565545 COMPP49747 757 aaPredicted RBP15.2■□□□□ 0.02
CSPG4P13-201ENST00000565545 STPG2Q8N412 459 aa15.2■□□□□ 0.02
CSPG4P13-201ENST00000565545 SSX3Q99909 188 aa15.2■□□□□ 0.02
CSPG4P13-201ENST00000565545 HINT2Q9BX68 163 aa15.2■□□□□ 0.02
CSPG4P13-201ENST00000565545 NCBP2LA6PVI3 153 aaKnown RBP15.19■□□□□ 0.02
CSPG4P13-201ENST00000565545 SRP14P37108 136 aaKnown RBP15.19■□□□□ 0.02
CSPG4P13-201ENST00000565545 RPL27AP46776 148 aaKnown RBP15.19■□□□□ 0.02
CSPG4P13-201ENST00000565545 EIF5AP63241 154 aaKnown RBP15.19■□□□□ 0.02
CSPG4P13-201ENST00000565545 HBG1P69891 147 aa15.19■□□□□ 0.02
CSPG4P13-201ENST00000565545 HBG2P69892 147 aa15.19■□□□□ 0.02
CSPG4P13-201ENST00000565545 ERHP84090 104 aaKnown RBP15.19■□□□□ 0.02
CSPG4P13-201ENST00000565545 PJVKQ0ZLH3 352 aa15.19■□□□□ 0.02
CSPG4P13-201ENST00000565545 TNXAQ16473 311 aa15.19■□□□□ 0.02
CSPG4P13-201ENST00000565545 SPINK9Q5DT21 86 aa15.19■□□□□ 0.02
CSPG4P13-201ENST00000565545 HSD17B13Q7Z5P4 300 aaPredicted RBP15.19■□□□□ 0.02
CSPG4P13-201ENST00000565545 SRSF8Q9BRL6 282 aaKnown RBP15.19■□□□□ 0.02
CSPG4P13-201ENST00000565545 H3BP45 60 aa15.18■□□□□ 0.02
CSPG4P13-201ENST00000565545 TCF21O43680 179 aa15.18■□□□□ 0.02
CSPG4P13-201ENST00000565545 MYOD1P15172 320 aa15.18■□□□□ 0.02
CSPG4P13-201ENST00000565545 HTR2BP41595 481 aa15.18■□□□□ 0.02
CSPG4P13-201ENST00000565545 RAB11AP62491 216 aa15.18■□□□□ 0.02
CSPG4P13-201ENST00000565545 UBA52P62987 128 aaKnown RBP15.18■□□□□ 0.02
CSPG4P13-201ENST00000565545 NHLH2Q02577 135 aa15.18■□□□□ 0.02
CSPG4P13-201ENST00000565545 OR1S2Q8NGQ3 325 aa15.18■□□□□ 0.02
CSPG4P13-201ENST00000565545 PIFOQ8TCI5 191 aa15.18■□□□□ 0.02
CSPG4P13-201ENST00000565545 RBM14Q96PK6 669 aaKnown RBP15.18■□□□□ 0.02
CSPG4P13-201ENST00000565545 OR4C12Q96R67 309 aa15.18■□□□□ 0.02
CSPG4P13-201ENST00000565545 FBXL17Q9UF56 701 aa15.18■□□□□ 0.02
CSPG4P13-201ENST00000565545 PITPNC1Q9UKF7 332 aa15.18■□□□□ 0.02
CSPG4P13-201ENST00000565545 CA2P00918 260 aa15.17■□□□□ 0.02
CSPG4P13-201ENST00000565545 IFNA10P01566 189 aa15.17■□□□□ 0.02
CSPG4P13-201ENST00000565545 OPN1MWP04001 364 aa15.17■□□□□ 0.02
CSPG4P13-201ENST00000565545 OPN1MW2P0DN77 364 aa15.17■□□□□ 0.02
CSPG4P13-201ENST00000565545 OPN1MW3P0DN78 364 aa15.17■□□□□ 0.02
CSPG4P13-201ENST00000565545 Q8N9W7 124 aa15.17■□□□□ 0.02
CSPG4P13-201ENST00000565545 SLC24A4Q8NFF2 622 aa15.17■□□□□ 0.02
CSPG4P13-201ENST00000565545 ZNF471Q9BX82 626 aaPredicted RBP15.17■□□□□ 0.02
CSPG4P13-201ENST00000565545 CYTL1Q9NRR1 136 aa15.17■□□□□ 0.02
CSPG4P13-201ENST00000565545 C15orf62A8K5M9 175 aa15.16■□□□□ 0.02
CSPG4P13-201ENST00000565545 FCN1O00602 326 aa15.16■□□□□ 0.02
CSPG4P13-201ENST00000565545 FGF16O43320 207 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms