RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 SLC25A4P12235 298 aa8.81□□□□□ -1
SF3B3-205ENST00000564899 PVALBP20472 110 aaPredicted RBP8.81□□□□□ -1
SF3B3-205ENST00000564899 MAS1LP35410 378 aa8.81□□□□□ -1
SF3B3-205ENST00000564899 IER3P46695 156 aa8.81□□□□□ -1
SF3B3-205ENST00000564899 HOXA1P49639 335 aaPredicted RBP8.81□□□□□ -1
SF3B3-205ENST00000564899 VAMP2P63027 116 aa8.81□□□□□ -1
SF3B3-205ENST00000564899 PJVKQ0ZLH3 352 aa8.81□□□□□ -1
SF3B3-205ENST00000564899 SCGB2A2Q13296 93 aa8.81□□□□□ -1
SF3B3-205ENST00000564899 TNXAQ16473 311 aa8.81□□□□□ -1
SF3B3-205ENST00000564899 MRGPRG-AS1Q2M3A8 158 aa8.81□□□□□ -1
SF3B3-205ENST00000564899 C10orf55Q5SWW7 151 aa8.81□□□□□ -1
SF3B3-205ENST00000564899 Q6YL49 198 aa8.81□□□□□ -1
SF3B3-205ENST00000564899 NOXA1Q86UR1 476 aa8.81□□□□□ -1
SF3B3-205ENST00000564899 Q8N9W7 124 aa8.81□□□□□ -1
SF3B3-205ENST00000564899 OR11H4Q8NGC9 324 aa8.81□□□□□ -1
SF3B3-205ENST00000564899 OR1L8Q8NGR8 309 aa8.81□□□□□ -1
SF3B3-205ENST00000564899 OR5B3Q8NH48 314 aa8.81□□□□□ -1
SF3B3-205ENST00000564899 DCUN1D4Q92564 292 aa8.81□□□□□ -1
SF3B3-205ENST00000564899 RASL11BQ9BPW5 248 aa8.81□□□□□ -1
SF3B3-205ENST00000564899 RNF126Q9BV68 326 aa8.81□□□□□ -1
SF3B3-205ENST00000564899 HINT2Q9BX68 163 aa8.81□□□□□ -1
SF3B3-205ENST00000564899 PRDM13Q9H4Q3 707 aa8.81□□□□□ -1
SF3B3-205ENST00000564899 E5RGE8 158 aa8.8□□□□□ -1
SF3B3-205ENST00000564899 FCN1O00602 326 aa8.8□□□□□ -1
SF3B3-205ENST00000564899 CHST1O43916 411 aa8.8□□□□□ -1
SF3B3-205ENST00000564899 RPL27AP46776 148 aaKnown RBP8.8□□□□□ -1
SF3B3-205ENST00000564899 COMPP49747 757 aaPredicted RBP8.8□□□□□ -1
SF3B3-205ENST00000564899 PRCDQ00LT1 54 aa8.8□□□□□ -1
SF3B3-205ENST00000564899 PDLIM3Q53GG5 364 aaPredicted RBP8.8□□□□□ -1
SF3B3-205ENST00000564899 C16orf82Q7Z2V1 217 aa8.8□□□□□ -1
SF3B3-205ENST00000564899 SIGLECL1Q8N7X8 197 aa8.8□□□□□ -1
SF3B3-205ENST00000564899 C5orf56Q8N8D9 126 aa8.8□□□□□ -1
SF3B3-205ENST00000564899 GRPEL2Q8TAA5 225 aa8.8□□□□□ -1
SF3B3-205ENST00000564899 DTD1Q8TEA8 209 aa8.8□□□□□ -1
SF3B3-205ENST00000564899 SSMEM1Q8WWF3 244 aa8.8□□□□□ -1
SF3B3-205ENST00000564899 HYLS1Q96M11 299 aa8.8□□□□□ -1
SF3B3-205ENST00000564899 RAB40CQ96S21 281 aa8.8□□□□□ -1
SF3B3-205ENST00000564899 PLEKHA3Q9HB20 300 aa8.8□□□□□ -1
SF3B3-205ENST00000564899 ENY2Q9NPA8 101 aa8.8□□□□□ -1
SF3B3-205ENST00000564899 TNFRSF19Q9NS68 423 aa8.8□□□□□ -1
SF3B3-205ENST00000564899 KMT2CQ8NEZ4 4911 aaKnown RBP8.8□□□□□ -1
SF3B3-205ENST00000564899 NBEAL2Q6ZNJ1 2754 aa8.79□□□□□ -1
SF3B3-205ENST00000564899 M0QZK8 103 aa8.79□□□□□ -1
SF3B3-205ENST00000564899 ARPC5O15511 151 aa8.79□□□□□ -1
SF3B3-205ENST00000564899 FGF16O43320 207 aa8.79□□□□□ -1
SF3B3-205ENST00000564899 HOXA3O43365 443 aaPredicted RBP8.79□□□□□ -1
SF3B3-205ENST00000564899 GPR137BO60478 399 aa8.79□□□□□ -1
SF3B3-205ENST00000564899 CNIH1O95406 144 aa8.79□□□□□ -1
SF3B3-205ENST00000564899 HLA-DRB1P01911 266 aa8.79□□□□□ -1
SF3B3-205ENST00000564899 LYL1P12980 280 aa8.79□□□□□ -1
SF3B3-205ENST00000564899 EIF2B2P49770 351 aaKnown RBP8.79□□□□□ -1
SF3B3-205ENST00000564899 NKX2-5P52952 324 aaPredicted RBP8.79□□□□□ -1
SF3B3-205ENST00000564899 SSBP2P81877 361 aaPredicted RBP8.79□□□□□ -1
SF3B3-205ENST00000564899 RBMS3Q6XE24 437 aaKnown RBP8.79□□□□□ -1
SF3B3-205ENST00000564899 ZNF546Q86UE3 836 aa8.79□□□□□ -1
SF3B3-205ENST00000564899 SRSF12Q8WXF0 261 aaKnown RBP8.79□□□□□ -1
SF3B3-205ENST00000564899 CIB3Q96Q77 187 aaPredicted RBP8.79□□□□□ -1
SF3B3-205ENST00000564899 C11orf1Q9H5F2 150 aa8.79□□□□□ -1
SF3B3-205ENST00000564899 NDUFA4L2Q9NRX3 87 aa8.79□□□□□ -1
SF3B3-205ENST00000564899 VPREB3Q9UKI3 123 aa8.79□□□□□ -1
SF3B3-205ENST00000564899 A0A1W2PN81 502 aa8.78□□□□□ -1
SF3B3-205ENST00000564899 H3BP45 60 aa8.78□□□□□ -1
SF3B3-205ENST00000564899 LY86O95711 162 aa8.78□□□□□ -1
SF3B3-205ENST00000564899 TMEM50AO95807 157 aa8.78□□□□□ -1
SF3B3-205ENST00000564899 CHRNA7P36544 502 aa8.78□□□□□ -1
SF3B3-205ENST00000564899 NUP62P37198 522 aaPredicted RBP8.78□□□□□ -1
SF3B3-205ENST00000564899 VDAC2P45880 294 aaPredicted RBP8.78□□□□□ -1
SF3B3-205ENST00000564899 P2RY1P47900 373 aa8.78□□□□□ -1
SF3B3-205ENST00000564899 CAV2P51636 162 aa8.78□□□□□ -1
SF3B3-205ENST00000564899 PAX9P55771 341 aa8.78□□□□□ -1
SF3B3-205ENST00000564899 TAS2R30P59541 319 aa8.78□□□□□ -1
SF3B3-205ENST00000564899 RPL23AP62750 156 aaKnown RBP8.78□□□□□ -1
SF3B3-205ENST00000564899 CX3CL1P78423 397 aa8.78□□□□□ -1
SF3B3-205ENST00000564899 FXYD3Q14802 87 aa8.78□□□□□ -1
SF3B3-205ENST00000564899 TUSC1Q2TAM9 212 aa8.78□□□□□ -1
SF3B3-205ENST00000564899 TMEM65Q6PI78 240 aa8.78□□□□□ -1
SF3B3-205ENST00000564899 ZNF562Q6V9R5 426 aa8.78□□□□□ -1
SF3B3-205ENST00000564899 OR2C3Q8N628 320 aa8.78□□□□□ -1
SF3B3-205ENST00000564899 ARPC1AQ92747 370 aa8.78□□□□□ -1
SF3B3-205ENST00000564899 HIPK2Q9H2X6 1198 aa8.78□□□□□ -1
SF3B3-205ENST00000564899 HEYLQ9NQ87 328 aaPredicted RBP8.78□□□□□ -1
SF3B3-205ENST00000564899 PSENENQ9NZ42 101 aa8.78□□□□□ -1
SF3B3-205ENST00000564899 TNFSF18Q9UNG2 199 aa8.78□□□□□ -1
SF3B3-205ENST00000564899 WSB1Q9Y6I7 421 aa8.78□□□□□ -1
SF3B3-205ENST00000564899 RYR3Q15413 4870 aa8.78□□□□□ -1
SF3B3-205ENST00000564899 IGHV7-81A0A0B4J1V7 117 aa8.77□□□□□ -1.01
SF3B3-205ENST00000564899 A0A1B0GW64 132 aa8.77□□□□□ -1.01
SF3B3-205ENST00000564899 FAM24AA6NFZ4 105 aa8.77□□□□□ -1.01
SF3B3-205ENST00000564899 SH2D7A6NKC9 451 aaPredicted RBP8.77□□□□□ -1.01
SF3B3-205ENST00000564899 CGB1A6NKQ9 187 aa8.77□□□□□ -1.01
SF3B3-205ENST00000564899 HMSDA8MTL9 139 aa8.77□□□□□ -1.01
SF3B3-205ENST00000564899 E7EUB6 86 aa8.77□□□□□ -1.01
SF3B3-205ENST00000564899 TSC22D2O75157 780 aa8.77□□□□□ -1.01
SF3B3-205ENST00000564899 NDPQ00604 133 aa8.77□□□□□ -1.01
SF3B3-205ENST00000564899 SPANXN5Q5MJ07 72 aa8.77□□□□□ -1.01
SF3B3-205ENST00000564899 MRPL41Q8IXM3 137 aaKnown RBP8.77□□□□□ -1.01
SF3B3-205ENST00000564899 TMEM86BQ8N661 226 aa8.77□□□□□ -1.01
SF3B3-205ENST00000564899 INO80EQ8NBZ0 244 aaPredicted RBP8.77□□□□□ -1.01
SF3B3-205ENST00000564899 OR10W1Q8NGF6 305 aa8.77□□□□□ -1.01
SF3B3-205ENST00000564899 ABHD5Q8WTS1 349 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms