RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 THYN1Q9P016 225 aa14.03□□□□□ -0.16
SYNGR3-204ENST00000564642 PEMTQ9UBM1 199 aa14.03□□□□□ -0.16
SYNGR3-204ENST00000564642 PRNDQ9UKY0 176 aa14.03□□□□□ -0.16
SYNGR3-204ENST00000564642 NSG2Q9Y328 171 aa14.03□□□□□ -0.16
SYNGR3-204ENST00000564642 OR51B2Q9Y5P1 312 aa14.03□□□□□ -0.16
SYNGR3-204ENST00000564642 SORL1Q92673 2214 aa14.02□□□□□ -0.16
SYNGR3-204ENST00000564642 IGLC7A0M8Q6 106 aa14.02□□□□□ -0.17
SYNGR3-204ENST00000564642 CTDSPLO15194 276 aa14.02□□□□□ -0.17
SYNGR3-204ENST00000564642 IGHV3-23P01764 117 aa14.02□□□□□ -0.17
SYNGR3-204ENST00000564642 GP9P14770 177 aa14.02□□□□□ -0.17
SYNGR3-204ENST00000564642 PI3P19957 117 aa14.02□□□□□ -0.17
SYNGR3-204ENST00000564642 PTBP1P26599 531 aaKnown RBP eCLIP14.02□□□□□ -0.17
SYNGR3-204ENST00000564642 PPP5CP53041 499 aa14.02□□□□□ -0.17
SYNGR3-204ENST00000564642 PIGPP57054 158 aa14.02□□□□□ -0.17
SYNGR3-204ENST00000564642 RND3P61587 244 aa14.02□□□□□ -0.17
SYNGR3-204ENST00000564642 MEF2DQ14814 521 aa14.02□□□□□ -0.17
SYNGR3-204ENST00000564642 H2BFWTQ7Z2G1 175 aa14.02□□□□□ -0.17
SYNGR3-204ENST00000564642 OR10W1Q8NGF6 305 aa14.02□□□□□ -0.17
SYNGR3-204ENST00000564642 MCFD2Q8NI22 146 aa14.02□□□□□ -0.17
SYNGR3-204ENST00000564642 SMIM4Q8WVI0 70 aa14.02□□□□□ -0.17
SYNGR3-204ENST00000564642 SLIRPQ9GZT3 109 aaKnown RBP14.02□□□□□ -0.17
SYNGR3-204ENST00000564642 CEPT1Q9Y6K0 416 aa14.02□□□□□ -0.17
SYNGR3-204ENST00000564642 IGLV11-55A0A075B6I3 123 aa14.01□□□□□ -0.17
SYNGR3-204ENST00000564642 PPP5D1E7EU14 171 aa14.01□□□□□ -0.17
SYNGR3-204ENST00000564642 GGCTO75223 188 aaKnown RBP14.01□□□□□ -0.17
SYNGR3-204ENST00000564642 IGLV1-51P01701 117 aa14.01□□□□□ -0.17
SYNGR3-204ENST00000564642 OR13C7P0DN81 318 aa14.01□□□□□ -0.17
SYNGR3-204ENST00000564642 KLK9Q2XQG4 91 aa14.01□□□□□ -0.17
SYNGR3-204ENST00000564642 HAPLN4Q86UW8 402 aa14.01□□□□□ -0.17
SYNGR3-204ENST00000564642 CXorf58Q96LI9 332 aa14.01□□□□□ -0.17
SYNGR3-204ENST00000564642 NDUFA4L2Q9NRX3 87 aa14.01□□□□□ -0.17
SYNGR3-204ENST00000564642 COPZ2Q9P299 210 aa14.01□□□□□ -0.17
SYNGR3-204ENST00000564642 KLK9Q9UKQ9 250 aa14.01□□□□□ -0.17
SYNGR3-204ENST00000564642 SMAD5-AS1Q9Y6J3 95 aa14.01□□□□□ -0.17
SYNGR3-204ENST00000564642 S4R3C0 116 aa14.01□□□□□ -0.17
SYNGR3-204ENST00000564642 TRBV7-1A0A0A6YYK4 115 aa14□□□□□ -0.17
SYNGR3-204ENST00000564642 DISC1C4P0D8 188 aa14□□□□□ -0.17
SYNGR3-204ENST00000564642 ARL3P36405 182 aa14□□□□□ -0.17
SYNGR3-204ENST00000564642 MECP2P51608 486 aaKnown RBP14□□□□□ -0.17
SYNGR3-204ENST00000564642 CLEC19AQ6UXS0 136 aa14□□□□□ -0.17
SYNGR3-204ENST00000564642 IL34Q6ZMJ4 242 aa14□□□□□ -0.17
SYNGR3-204ENST00000564642 CCDC71LQ8N9Z2 235 aa14□□□□□ -0.17
SYNGR3-204ENST00000564642 OR5B3Q8NH48 314 aa14□□□□□ -0.17
SYNGR3-204ENST00000564642 OR4A16Q8NH70 328 aa14□□□□□ -0.17
SYNGR3-204ENST00000564642 LSM10Q969L4 123 aaKnown RBP14□□□□□ -0.17
SYNGR3-204ENST00000564642 SEC22AQ96IW7 307 aa14□□□□□ -0.17
SYNGR3-204ENST00000564642 TMEM56Q96MV1 263 aa14□□□□□ -0.17
SYNGR3-204ENST00000564642 RSL24D1Q9UHA3 163 aaKnown RBP14□□□□□ -0.17
SYNGR3-204ENST00000564642 C3orf85A0A1B0GTC6 90 aa13.99□□□□□ -0.17
SYNGR3-204ENST00000564642 FABP12A6NFH5 140 aa13.99□□□□□ -0.17
SYNGR3-204ENST00000564642 H0Y980 276 aa13.99□□□□□ -0.17
SYNGR3-204ENST00000564642 IGKV1-39P01597 117 aa13.99□□□□□ -0.17
SYNGR3-204ENST00000564642 IGKV1D-39P04432 117 aa13.99□□□□□ -0.17
SYNGR3-204ENST00000564642 CSN3P07498 182 aa13.99□□□□□ -0.17
SYNGR3-204ENST00000564642 AKAIN1P0CW23 69 aa13.99□□□□□ -0.17
SYNGR3-204ENST00000564642 TNFSF8P32971 234 aa13.99□□□□□ -0.17
SYNGR3-204ENST00000564642 WT1-ASQ06250 92 aa13.99□□□□□ -0.17
SYNGR3-204ENST00000564642 SLC25A24Q6NUK1 477 aa13.99□□□□□ -0.17
SYNGR3-204ENST00000564642 FAAP20Q6NZ36 180 aa13.99□□□□□ -0.17
SYNGR3-204ENST00000564642 GDPD1Q8N9F7 314 aa13.99□□□□□ -0.17
SYNGR3-204ENST00000564642 OR13C8Q8NGS7 320 aa13.99□□□□□ -0.17
SYNGR3-204ENST00000564642 MARCH1Q8TCQ1 289 aa13.99□□□□□ -0.17
SYNGR3-204ENST00000564642 MRGPRFQ96AM1 343 aa13.99□□□□□ -0.17
SYNGR3-204ENST00000564642 CCDC140Q96MF4 163 aa13.99□□□□□ -0.17
SYNGR3-204ENST00000564642 TMEM14BQ9NUH8 114 aa13.99□□□□□ -0.17
SYNGR3-204ENST00000564642 SIGLEC8Q9NYZ4 499 aa13.99□□□□□ -0.17
SYNGR3-204ENST00000564642 C15orf61A6NNL5 157 aa13.98□□□□□ -0.17
SYNGR3-204ENST00000564642 ATG12O94817 140 aa13.98□□□□□ -0.17
SYNGR3-204ENST00000564642 OR2C1O95371 312 aa13.98□□□□□ -0.17
SYNGR3-204ENST00000564642 HLA-AP01891 365 aaKnown RBP13.98□□□□□ -0.17
SYNGR3-204ENST00000564642 TP53RKQ96S44 253 aa13.98□□□□□ -0.17
SYNGR3-204ENST00000564642 NXF2Q9GZY0 626 aaKnown RBP13.98□□□□□ -0.17
SYNGR3-204ENST00000564642 C14orf166Q9Y224 244 aaKnown RBP13.98□□□□□ -0.17
SYNGR3-204ENST00000564642 DMRT1Q9Y5R6 373 aa13.98□□□□□ -0.17
SYNGR3-204ENST00000564642 MFSD2BA6NFX1 497 aa13.97□□□□□ -0.17
SYNGR3-204ENST00000564642 GSTZ1O43708 216 aaPredicted RBP13.97□□□□□ -0.17
SYNGR3-204ENST00000564642 CLEC3BP05452 202 aa13.97□□□□□ -0.17
SYNGR3-204ENST00000564642 CTSDP07339 412 aaPredicted RBP13.97□□□□□ -0.17
SYNGR3-204ENST00000564642 TRIM16LQ309B1 348 aa13.97□□□□□ -0.17
SYNGR3-204ENST00000564642 FAM106AQ4KMX7 169 aa13.97□□□□□ -0.17
SYNGR3-204ENST00000564642 GPHB5Q86YW7 130 aa13.97□□□□□ -0.17
SYNGR3-204ENST00000564642 DBX1A6NMT0 343 aa13.96□□□□□ -0.17
SYNGR3-204ENST00000564642 NHLRC4P0CG21 123 aaPredicted RBP13.96□□□□□ -0.17
SYNGR3-204ENST00000564642 SP6Q3SY56 376 aa13.96□□□□□ -0.17
SYNGR3-204ENST00000564642 LCN12Q6JVE5 192 aa13.96□□□□□ -0.17
SYNGR3-204ENST00000564642 OR4C16Q8NGL9 310 aa13.96□□□□□ -0.17
SYNGR3-204ENST00000564642 OR1L6Q8NGR2 347 aa13.96□□□□□ -0.17
SYNGR3-204ENST00000564642 VN1R17PQ8TDU5 208 aa13.96□□□□□ -0.17
SYNGR3-204ENST00000564642 F11RQ9Y624 299 aaKnown RBP13.96□□□□□ -0.17
SYNGR3-204ENST00000564642 TEX13DA0A0J9YY54 714 aaPredicted RBP13.95□□□□□ -0.18
SYNGR3-204ENST00000564642 ANKRD20A5PA0PJZ0 165 aa13.95□□□□□ -0.18
SYNGR3-204ENST00000564642 ZNF320A2RRD8 509 aa13.95□□□□□ -0.18
SYNGR3-204ENST00000564642 LGALS9O00182 355 aa13.95□□□□□ -0.18
SYNGR3-204ENST00000564642 B3GALNT1O75752 331 aa13.95□□□□□ -0.18
SYNGR3-204ENST00000564642 S100A5P33763 92 aa13.95□□□□□ -0.18
SYNGR3-204ENST00000564642 AKR1C2P52895 323 aa13.95□□□□□ -0.18
SYNGR3-204ENST00000564642 SURF2Q15527 256 aaPredicted RBP13.95□□□□□ -0.18
SYNGR3-204ENST00000564642 C11orf87Q6NUJ2 197 aa13.95□□□□□ -0.18
SYNGR3-204ENST00000564642 Q8N402 240 aa13.95□□□□□ -0.18
SYNGR3-204ENST00000564642 ZNF502Q8TBZ5 544 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms