RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 RAB11AP62491 216 aa6.04□□□□□ -1.44
MAP1LC3B-205ENST00000564638 GNB2P62879 340 aa6.04□□□□□ -1.44
MAP1LC3B-205ENST00000564638 DLK1P80370 383 aa6.04□□□□□ -1.44
MAP1LC3B-205ENST00000564638 VWC2Q2TAL6 325 aa6.04□□□□□ -1.44
MAP1LC3B-205ENST00000564638 SPSB3Q6PJ21 355 aa6.04□□□□□ -1.44
MAP1LC3B-205ENST00000564638 ATRAIDQ6UW56 229 aa6.04□□□□□ -1.44
MAP1LC3B-205ENST00000564638 C1orf229Q6ZS94 237 aaPredicted RBP6.04□□□□□ -1.44
MAP1LC3B-205ENST00000564638 Q71RC1 249 aaPredicted RBP6.04□□□□□ -1.44
MAP1LC3B-205ENST00000564638 PDPNQ86YL7 162 aa6.04□□□□□ -1.44
MAP1LC3B-205ENST00000564638 VKORC1L1Q8N0U8 176 aa6.04□□□□□ -1.44
MAP1LC3B-205ENST00000564638 OR8B3Q8NGG8 313 aa6.04□□□□□ -1.44
MAP1LC3B-205ENST00000564638 SPATA3Q8NHX4 192 aa6.04□□□□□ -1.44
MAP1LC3B-205ENST00000564638 OSR1Q8TAX0 266 aaPredicted RBP6.04□□□□□ -1.44
MAP1LC3B-205ENST00000564638 ZNF596Q8TC21 504 aa6.04□□□□□ -1.44
MAP1LC3B-205ENST00000564638 SFT2D1Q8WV19 159 aa6.04□□□□□ -1.44
MAP1LC3B-205ENST00000564638 RAB1CQ92928 201 aa6.04□□□□□ -1.44
MAP1LC3B-205ENST00000564638 TMEM186Q96B77 213 aa6.04□□□□□ -1.44
MAP1LC3B-205ENST00000564638 HARBI1Q96MB7 349 aa6.04□□□□□ -1.44
MAP1LC3B-205ENST00000564638 OR8B2Q96RD0 313 aa6.04□□□□□ -1.44
MAP1LC3B-205ENST00000564638 SMR3AQ99954 134 aa6.04□□□□□ -1.44
MAP1LC3B-205ENST00000564638 UNKLQ9H9P5 680 aaKnown RBP6.04□□□□□ -1.44
MAP1LC3B-205ENST00000564638 KCNIP2Q9NS61 270 aa6.04□□□□□ -1.44
MAP1LC3B-205ENST00000564638 TMEM14BQ9NUH8 114 aa6.04□□□□□ -1.44
MAP1LC3B-205ENST00000564638 MIOXQ9UGB7 285 aa6.04□□□□□ -1.44
MAP1LC3B-205ENST00000564638 ZNF257Q9Y2Q1 563 aa6.04□□□□□ -1.44
MAP1LC3B-205ENST00000564638 MALRD1Q5VYJ5 2156 aa6.04□□□□□ -1.44
MAP1LC3B-205ENST00000564638 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.03□□□□□ -1.444e-8■■□□□ 12.9
MAP1LC3B-205ENST00000564638 A0A087X0M5 115 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 TRAV3A0A0B4J244 114 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 A0A1B0GX30 115 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 hCG_1809904A0A1W2PP81 198 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 A0A1W2PPE2 198 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 A0A1W2PR64 198 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 A0A1W2PRV1 198 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 SMCO3A2RU48 225 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 MAP1LC3B2A6NCE7 125 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 RBFOX3A6NFN3 312 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 H0YJW9 148 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 H7C2Y5 167 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 J3QR06 171 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 DNASE2O00115 360 aaPredicted RBP6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 UPK2O00526 184 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 TSPAN4O14817 238 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 MPDU1O75352 247 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 KBTBD11O94819 623 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 RBP4P02753 201 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 IGHV1-8P0DP01 117 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 NPY1RP25929 384 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 RAB13P51153 203 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 HSPE1P61604 102 aaKnown RBP6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 LOXL1Q08397 574 aaPredicted RBP6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 TMEM177Q53S58 311 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 ZNF506Q5JVG8 444 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 ETV3LQ6ZN32 361 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 CENPVQ7Z7K6 275 aaPredicted RBP6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 CLRN3Q8NCR9 226 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 SLC24A4Q8NFF2 622 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 OR4A5Q8NH83 315 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 CLDND2Q8NHS1 167 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 VSTM2AQ8TAG5 236 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 MBD3L1Q8WWY6 194 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 TNFRSF14Q92956 283 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 NEIL1Q96FI4 390 aaPredicted RBP6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 RCC1LQ96I51 464 aaKnown RBP6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 GGACTQ9BVM4 153 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 NPCDR1Q9BY65 106 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 MAP1LC3BQ9GZQ8 125 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 SLC35B3Q9H1N7 401 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 TMEM133Q9H2Q1 129 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 PLEKHA3Q9HB20 300 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 FKBP11Q9NYL4 201 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 BET1LQ9NYM9 111 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 WDR83OSQ9Y284 106 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 OR51B2Q9Y5P1 312 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 ARHGAP32A7KAX9 2087 aa6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 SONP18583 2426 aaKnown RBP6.03□□□□□ -1.44
MAP1LC3B-205ENST00000564638 A0A096LNT2 108 aa6.02□□□□□ -1.45
MAP1LC3B-205ENST00000564638 CTXND1A0A1B0GTU2 59 aa6.02□□□□□ -1.45
MAP1LC3B-205ENST00000564638 LOC102723971A0A1B0GUV8 181 aa6.02□□□□□ -1.45
MAP1LC3B-205ENST00000564638 FAM74A7A6NL05 159 aa6.02□□□□□ -1.45
MAP1LC3B-205ENST00000564638 C9JQL5 133 aa6.02□□□□□ -1.45
MAP1LC3B-205ENST00000564638 LY6G6DO95868 133 aa6.02□□□□□ -1.45
MAP1LC3B-205ENST00000564638 HSPB1P04792 205 aaKnown RBP6.02□□□□□ -1.45
MAP1LC3B-205ENST00000564638 IFNA4P05014 189 aa6.02□□□□□ -1.45
MAP1LC3B-205ENST00000564638 SAA1P0DJI8 122 aaPredicted RBP6.02□□□□□ -1.45
MAP1LC3B-205ENST00000564638 FOSL1P15407 271 aa6.02□□□□□ -1.45
MAP1LC3B-205ENST00000564638 CD1BP29016 333 aa6.02□□□□□ -1.45
MAP1LC3B-205ENST00000564638 NPBWR1P48145 328 aa6.02□□□□□ -1.45
MAP1LC3B-205ENST00000564638 ZNF137PP52743 207 aa6.02□□□□□ -1.45
MAP1LC3B-205ENST00000564638 PRRX1P54821 245 aa6.02□□□□□ -1.45
MAP1LC3B-205ENST00000564638 ATP5IP56385 69 aaPredicted RBP6.02□□□□□ -1.45
MAP1LC3B-205ENST00000564638 RPS16P62249 146 aaKnown RBP6.02□□□□□ -1.45
MAP1LC3B-205ENST00000564638 PRCDQ00LT1 54 aa6.02□□□□□ -1.45
MAP1LC3B-205ENST00000564638 HAGHQ16775 308 aa6.02□□□□□ -1.45
MAP1LC3B-205ENST00000564638 TMEM249Q2WGJ8 235 aa6.02□□□□□ -1.45
MAP1LC3B-205ENST00000564638 ACOT6Q3I5F7 207 aaPredicted RBP6.02□□□□□ -1.45
MAP1LC3B-205ENST00000564638 FAM74A3Q4VXF1 159 aa6.02□□□□□ -1.45
MAP1LC3B-205ENST00000564638 SOHLH1Q5JUK2 328 aa6.02□□□□□ -1.45
MAP1LC3B-205ENST00000564638 FFAR4Q5NUL3 377 aa6.02□□□□□ -1.45
MAP1LC3B-205ENST00000564638 ACSM6Q6P461 480 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms