RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 KLHDC1Q8N7A1 406 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 SIGLECL1Q8N7X8 197 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 FDCSPQ8NFU4 85 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 OR5T1Q8NG75 326 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 OR5AU1Q8NGC0 362 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 OR4P4Q8NGL7 312 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 OR4C13Q8NGP0 309 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 UBALD1Q8TB05 177 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 TNFRSF14Q92956 283 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 STARD4Q96DR4 205 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 ZNF714Q96N38 554 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 NAGKQ9UJ70 344 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 RPUSD1Q9UJJ7 312 aaKnown RBP6.3□□□□□ -1.4
ATXN3-249ENST00000564606 SOX21Q9Y651 276 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-249ENST00000564606 SDK2Q58EX2 2172 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 MED12Q93074 2177 aa6.3□□□□□ -1.4
ATXN3-249ENST00000564606 NCKAP5O14513 1909 aa6.29□□□□□ -1.4
ATXN3-249ENST00000564606 SDK1Q7Z5N4 2213 aa6.29□□□□□ -1.4
ATXN3-249ENST00000564606 C20orf202A1L168 122 aa6.29□□□□□ -1.4
ATXN3-249ENST00000564606 ZNF705FA8MVS1 300 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-249ENST00000564606 A8MWP6 167 aa6.29□□□□□ -1.4
ATXN3-249ENST00000564606 PRSS46E5RG02 174 aa6.29□□□□□ -1.4
ATXN3-249ENST00000564606 FCN1O00602 326 aa6.29□□□□□ -1.4
ATXN3-249ENST00000564606 OR7C2O60412 319 aa6.29□□□□□ -1.4
ATXN3-249ENST00000564606 MMP23AO75900 390 aa6.29□□□□□ -1.4
ATXN3-249ENST00000564606 CA2P00918 260 aa6.29□□□□□ -1.4
ATXN3-249ENST00000564606 ZNF705DP0CH99 300 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-249ENST00000564606 ZNF705BP0CI00 300 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-249ENST00000564606 CGB3P0DN86 165 aa6.29□□□□□ -1.4
ATXN3-249ENST00000564606 CGB7P0DN87 165 aa6.29□□□□□ -1.4
ATXN3-249ENST00000564606 HIST1H1EP10412 219 aaKnown RBP6.29□□□□□ -1.4
ATXN3-249ENST00000564606 PAX1P15863 534 aa6.29□□□□□ -1.4
ATXN3-249ENST00000564606 ZNF83P51522 516 aa6.29□□□□□ -1.4
ATXN3-249ENST00000564606 PSG5Q15238 335 aa6.29□□□□□ -1.4
ATXN3-249ENST00000564606 LTC4SQ16873 150 aa6.29□□□□□ -1.4
ATXN3-249ENST00000564606 LRRC10Q5BKY1 277 aa6.29□□□□□ -1.4
ATXN3-249ENST00000564606 C1orf194Q5T5A4 169 aa6.29□□□□□ -1.4
ATXN3-249ENST00000564606 MIC13Q5XKP0 118 aa6.29□□□□□ -1.4
ATXN3-249ENST00000564606 ZNF600Q6ZNG1 722 aa6.29□□□□□ -1.4
ATXN3-249ENST00000564606 C19orf35Q6ZS72 473 aa6.29□□□□□ -1.4
ATXN3-249ENST00000564606 SLC25A48Q6ZT89 311 aaKnown RBP6.29□□□□□ -1.4
ATXN3-249ENST00000564606 TMPRSS7Q7RTY8 843 aa6.29□□□□□ -1.4
ATXN3-249ENST00000564606 PIP4P1Q86T03 277 aa6.29□□□□□ -1.4
ATXN3-249ENST00000564606 LINC00311Q8N616 119 aa6.29□□□□□ -1.4
ATXN3-249ENST00000564606 OR4B1Q8NGF8 309 aa6.29□□□□□ -1.4
ATXN3-249ENST00000564606 OR10X1Q8NGY0 326 aa6.29□□□□□ -1.4
ATXN3-249ENST00000564606 ZCCHC14Q8WYQ9 949 aaKnown RBP6.29□□□□□ -1.4
ATXN3-249ENST00000564606 FLYWCH2Q96CP2 140 aaKnown RBP6.29□□□□□ -1.4
ATXN3-249ENST00000564606 C14orf144Q96I85 54 aa6.29□□□□□ -1.4
ATXN3-249ENST00000564606 NABP2Q9BQ15 211 aa6.29□□□□□ -1.4
ATXN3-249ENST00000564606 PATZ1Q9HBE1 687 aaKnown RBP6.29□□□□□ -1.4
ATXN3-249ENST00000564606 MKI67P46013 3256 aaKnown RBP6.29□□□□□ -1.4
ATXN3-249ENST00000564606 SAA2-SAA4A0A096LPE2 208 aa6.28□□□□□ -1.4
ATXN3-249ENST00000564606 PRRG2O14669 202 aa6.28□□□□□ -1.4
ATXN3-249ENST00000564606 RRHO14718 337 aa6.28□□□□□ -1.4
ATXN3-249ENST00000564606 SPRY3O43610 288 aa6.28□□□□□ -1.4
ATXN3-249ENST00000564606 NDUFB3O43676 98 aa6.28□□□□□ -1.4
ATXN3-249ENST00000564606 COX7A2P2O60397 106 aa6.28□□□□□ -1.4
ATXN3-249ENST00000564606 TNFSF13O75888 250 aa6.28□□□□□ -1.4
ATXN3-249ENST00000564606 ACTL6BO94805 426 aa6.28□□□□□ -1.4
ATXN3-249ENST00000564606 AMY1AP04745 511 aa6.28□□□□□ -1.4
ATXN3-249ENST00000564606 FTH1P19P0C7X4 201 aa6.28□□□□□ -1.4
ATXN3-249ENST00000564606 SAA2P0DJI9 122 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-249ENST00000564606 CA7P43166 264 aa6.28□□□□□ -1.4
ATXN3-249ENST00000564606 ATP5G3P48201 142 aa6.28□□□□□ -1.4
ATXN3-249ENST00000564606 BRWD1-AS2P59051 145 aa6.28□□□□□ -1.4
ATXN3-249ENST00000564606 RPL8P62917 257 aaKnown RBP6.28□□□□□ -1.4
ATXN3-249ENST00000564606 CX3CL1P78423 397 aa6.28□□□□□ -1.4
ATXN3-249ENST00000564606 RBPJQ06330 500 aa6.28□□□□□ -1.4
ATXN3-249ENST00000564606 CD69Q07108 199 aa6.28□□□□□ -1.4
ATXN3-249ENST00000564606 TMEM177Q53S58 311 aa6.28□□□□□ -1.4
ATXN3-249ENST00000564606 STUMQ69YW2 141 aa6.28□□□□□ -1.4
ATXN3-249ENST00000564606 ZNF788Q6ZQV5 615 aa6.28□□□□□ -1.4
ATXN3-249ENST00000564606 FAM231DQ6ZW35 169 aa6.28□□□□□ -1.4
ATXN3-249ENST00000564606 ATP5L2Q7Z4Y8 100 aa6.28□□□□□ -1.4
ATXN3-249ENST00000564606 VASH2Q86V25 355 aa6.28□□□□□ -1.4
ATXN3-249ENST00000564606 MMD2Q8IY49 270 aa6.28□□□□□ -1.4
ATXN3-249ENST00000564606 ABHD12Q8N2K0 398 aa6.28□□□□□ -1.4
ATXN3-249ENST00000564606 OR1L6Q8NGR2 347 aa6.28□□□□□ -1.4
ATXN3-249ENST00000564606 OCC1Q8TAD7 63 aa6.28□□□□□ -1.4
ATXN3-249ENST00000564606 ITLN1Q8WWA0 313 aa6.28□□□□□ -1.4
ATXN3-249ENST00000564606 BORCS7Q96B45 105 aa6.28□□□□□ -1.4
ATXN3-249ENST00000564606 PERPQ96FX8 193 aa6.28□□□□□ -1.4
ATXN3-249ENST00000564606 C5orf30Q96GV9 206 aa6.28□□□□□ -1.4
ATXN3-249ENST00000564606 LRFN3Q9BTN0 628 aa6.28□□□□□ -1.4
ATXN3-249ENST00000564606 HINT2Q9BX68 163 aa6.28□□□□□ -1.4
ATXN3-249ENST00000564606 MRPL18Q9H0U6 180 aaKnown RBP6.28□□□□□ -1.4
ATXN3-249ENST00000564606 ZNF430Q9H8G1 570 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-249ENST00000564606 DNAJC4Q9NNZ3 241 aa6.28□□□□□ -1.4
ATXN3-249ENST00000564606 TMEM106BQ9NUM4 274 aa6.28□□□□□ -1.4
ATXN3-249ENST00000564606 CDC42EP3Q9UKI2 254 aa6.28□□□□□ -1.4
ATXN3-249ENST00000564606 ARHGAP21Q5T5U3 1957 aa6.27□□□□□ -1.4
ATXN3-249ENST00000564606 TRBV23-1A0A0A0MS06 115 aa6.27□□□□□ -1.41
ATXN3-249ENST00000564606 A0A1W2PNU3 283 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-249ENST00000564606 SCO2A0A1W2PP80 73 aa6.27□□□□□ -1.41
ATXN3-249ENST00000564606 NKX2-8O15522 239 aa6.27□□□□□ -1.41
ATXN3-249ENST00000564606 PPOXP50336 477 aa6.27□□□□□ -1.41
ATXN3-249ENST00000564606 PRRX1P54821 245 aa6.27□□□□□ -1.41
ATXN3-249ENST00000564606 LGALS4P56470 323 aa6.27□□□□□ -1.41
ATXN3-249ENST00000564606 UBE2G1P62253 170 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms