RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 PIGPP57054 158 aa23.45■■□□□ 1.34
CMTM4-204ENST00000563952 SSBP1Q04837 148 aaKnown RBP23.45■■□□□ 1.34
CMTM4-204ENST00000563952 THOC7Q6I9Y2 204 aaKnown RBP23.45■■□□□ 1.34
CMTM4-204ENST00000563952 CLEC19AQ6UXS0 136 aa23.45■■□□□ 1.34
CMTM4-204ENST00000563952 CCDC140Q96MF4 163 aa23.45■■□□□ 1.34
CMTM4-204ENST00000563952 PRNDQ9UKY0 176 aa23.45■■□□□ 1.34
CMTM4-204ENST00000563952 CEPT1Q9Y6K0 416 aa23.45■■□□□ 1.34
CMTM4-204ENST00000563952 IGKV1-39P01597 117 aa23.44■■□□□ 1.34
CMTM4-204ENST00000563952 HLA-AP01891 365 aaKnown RBP23.44■■□□□ 1.34
CMTM4-204ENST00000563952 IGKV1D-39P04432 117 aa23.44■■□□□ 1.34
CMTM4-204ENST00000563952 SERPINE2P07093 398 aa23.44■■□□□ 1.34
CMTM4-204ENST00000563952 RND3P61587 244 aa23.44■■□□□ 1.34
CMTM4-204ENST00000563952 KLK9Q2XQG4 91 aa23.44■■□□□ 1.34
CMTM4-204ENST00000563952 C11orf87Q6NUJ2 197 aa23.44■■□□□ 1.34
CMTM4-204ENST00000563952 FAAP20Q6NZ36 180 aa23.44■■□□□ 1.34
CMTM4-204ENST00000563952 CADM3Q8N126 398 aa23.44■■□□□ 1.34
CMTM4-204ENST00000563952 TERB2Q8NHR7 220 aa23.44■■□□□ 1.34
CMTM4-204ENST00000563952 NDUFA4L2Q9NRX3 87 aa23.44■■□□□ 1.34
CMTM4-204ENST00000563952 PEMTQ9UBM1 199 aa23.44■■□□□ 1.34
CMTM4-204ENST00000563952 KLK9Q9UKQ9 250 aa23.44■■□□□ 1.34
CMTM4-204ENST00000563952 SMAD5-AS1Q9Y6J3 95 aa23.44■■□□□ 1.34
CMTM4-204ENST00000563952 CCDC160A6NGH7 325 aa23.43■■□□□ 1.34
CMTM4-204ENST00000563952 CSN3P07498 182 aa23.43■■□□□ 1.34
CMTM4-204ENST00000563952 WT1-ASQ06250 92 aa23.43■■□□□ 1.34
CMTM4-204ENST00000563952 H2BFWTQ7Z2G1 175 aa23.43■■□□□ 1.34
CMTM4-204ENST00000563952 MCFD2Q8NI22 146 aa23.43■■□□□ 1.34
CMTM4-204ENST00000563952 MRGPRFQ96AM1 343 aa23.43■■□□□ 1.34
CMTM4-204ENST00000563952 SEC22AQ96IW7 307 aa23.43■■□□□ 1.34
CMTM4-204ENST00000563952 TSC22D3Q99576 134 aa23.43■■□□□ 1.34
CMTM4-204ENST00000563952 RABL2AQ9UBK7 228 aaPredicted RBP23.43■■□□□ 1.34
CMTM4-204ENST00000563952 RABL2BQ9UNT1 228 aa23.43■■□□□ 1.34
CMTM4-204ENST00000563952 DMRT1Q9Y5R6 373 aa23.43■■□□□ 1.34
CMTM4-204ENST00000563952 MFSD2BA6NFX1 497 aa23.42■■□□□ 1.34
CMTM4-204ENST00000563952 CTDSPLO15194 276 aa23.42■■□□□ 1.34
CMTM4-204ENST00000563952 GGCTO75223 188 aaKnown RBP23.42■■□□□ 1.34
CMTM4-204ENST00000563952 PTBP1P26599 531 aaKnown RBP eCLIP23.42■■□□□ 1.342e-7■■■■□ 20.8
CMTM4-204ENST00000563952 ARL3P36405 182 aa23.42■■□□□ 1.34
CMTM4-204ENST00000563952 HSD17B13Q7Z5P4 300 aaPredicted RBP23.42■■□□□ 1.34
CMTM4-204ENST00000563952 GDPD1Q8N9F7 314 aa23.42■■□□□ 1.34
CMTM4-204ENST00000563952 OR13C8Q8NGS7 320 aa23.42■■□□□ 1.34
CMTM4-204ENST00000563952 ZFAND1Q8TCF1 268 aa23.42■■□□□ 1.34
CMTM4-204ENST00000563952 LSM10Q969L4 123 aaKnown RBP23.42■■□□□ 1.34
CMTM4-204ENST00000563952 FKBP11Q9NYL4 201 aa23.42■■□□□ 1.34
CMTM4-204ENST00000563952 DBX1A6NMT0 343 aa23.41■■□□□ 1.34
CMTM4-204ENST00000563952 OR2C1O95371 312 aa23.41■■□□□ 1.34
CMTM4-204ENST00000563952 MECP2P51608 486 aaKnown RBP23.41■■□□□ 1.34
CMTM4-204ENST00000563952 MEF2DQ14814 521 aa23.41■■□□□ 1.34
CMTM4-204ENST00000563952 MARCH1Q8TCQ1 289 aa23.41■■□□□ 1.34
CMTM4-204ENST00000563952 CXorf58Q96LI9 332 aa23.41■■□□□ 1.34
CMTM4-204ENST00000563952 COPZ2Q9P299 210 aa23.41■■□□□ 1.34
CMTM4-204ENST00000563952 C15orf61A6NNL5 157 aa23.4■■□□□ 1.34
CMTM4-204ENST00000563952 H0Y980 276 aa23.4■■□□□ 1.34
CMTM4-204ENST00000563952 OR5B3Q8NH48 314 aa23.4■■□□□ 1.34
CMTM4-204ENST00000563952 OR4A16Q8NH70 328 aa23.4■■□□□ 1.34
CMTM4-204ENST00000563952 TP53RKQ96S44 253 aa23.4■■□□□ 1.34
CMTM4-204ENST00000563952 TMEM14BQ9NUH8 114 aa23.4■■□□□ 1.34
CMTM4-204ENST00000563952 THYN1Q9P016 225 aa23.4■■□□□ 1.34
CMTM4-204ENST00000563952 TRBV7-1A0A0A6YYK4 115 aa23.39■■□□□ 1.33
CMTM4-204ENST00000563952 CYB5BO43169 146 aa23.39■■□□□ 1.33
CMTM4-204ENST00000563952 TNFSF8P32971 234 aa23.39■■□□□ 1.33
CMTM4-204ENST00000563952 SLC25A24Q6NUK1 477 aa23.39■■□□□ 1.33
CMTM4-204ENST00000563952 CCDC71LQ8N9Z2 235 aa23.39■■□□□ 1.33
CMTM4-204ENST00000563952 RSL24D1Q9UHA3 163 aaKnown RBP23.39■■□□□ 1.33
CMTM4-204ENST00000563952 C3orf85A0A1B0GTC6 90 aa23.38■■□□□ 1.33
CMTM4-204ENST00000563952 DISC1C4P0D8 188 aa23.38■■□□□ 1.33
CMTM4-204ENST00000563952 AKAIN1P0CW23 69 aa23.38■■□□□ 1.33
CMTM4-204ENST00000563952 TMEM56Q96MV1 263 aa23.38■■□□□ 1.33
CMTM4-204ENST00000563952 ASCL2Q99929 193 aa23.38■■□□□ 1.33
CMTM4-204ENST00000563952 NXF2Q9GZY0 626 aaKnown RBP23.38■■□□□ 1.33
CMTM4-204ENST00000563952 ZC4H2Q9NQZ6 224 aa23.38■■□□□ 1.33
CMTM4-204ENST00000563952 SIGLEC8Q9NYZ4 499 aa23.38■■□□□ 1.33
CMTM4-204ENST00000563952 COL7A1Q02388 2944 aa23.37■■□□□ 1.33
CMTM4-204ENST00000563952 FABP12A6NFH5 140 aa23.37■■□□□ 1.33
CMTM4-204ENST00000563952 CLEC3BP05452 202 aa23.37■■□□□ 1.33
CMTM4-204ENST00000563952 OR4C16Q8NGL9 310 aa23.37■■□□□ 1.33
CMTM4-204ENST00000563952 GSTZ1O43708 216 aaPredicted RBP23.36■■□□□ 1.33
CMTM4-204ENST00000563952 CTSDP07339 412 aaPredicted RBP23.36■■□□□ 1.33
CMTM4-204ENST00000563952 SP6Q3SY56 376 aa23.36■■□□□ 1.33
CMTM4-204ENST00000563952 ZNF502Q8TBZ5 544 aa23.36■■□□□ 1.33
CMTM4-204ENST00000563952 C14orf166Q9Y224 244 aaKnown RBP23.36■■□□□ 1.33
CMTM4-204ENST00000563952 F11RQ9Y624 299 aaKnown RBP23.36■■□□□ 1.33
CMTM4-204ENST00000563952 GPR183P32249 361 aa23.35■■□□□ 1.33
CMTM4-204ENST00000563952 MFAP2P55001 183 aa23.35■■□□□ 1.33
CMTM4-204ENST00000563952 IZUMO4Q1ZYL8 232 aa23.35■■□□□ 1.33
CMTM4-204ENST00000563952 TRIM16LQ309B1 348 aa23.35■■□□□ 1.33
CMTM4-204ENST00000563952 IGKV1-5P01602 117 aa23.34■■□□□ 1.33
CMTM4-204ENST00000563952 AKR1C2P52895 323 aa23.34■■□□□ 1.33
CMTM4-204ENST00000563952 LCN12Q6JVE5 192 aa23.34■■□□□ 1.33
CMTM4-204ENST00000563952 ADAMTSL5Q6ZMM2 481 aa23.34■■□□□ 1.33
CMTM4-204ENST00000563952 GPHB5Q86YW7 130 aa23.34■■□□□ 1.33
CMTM4-204ENST00000563952 DYNLRB2Q8TF09 96 aa23.34■■□□□ 1.33
CMTM4-204ENST00000563952 IGHV3-21A0A0B4J1V1 117 aa23.33■■□□□ 1.33
CMTM4-204ENST00000563952 ZNF320A2RRD8 509 aa23.33■■□□□ 1.33
CMTM4-204ENST00000563952 LGALS9O00182 355 aa23.33■■□□□ 1.33
CMTM4-204ENST00000563952 NHLRC4P0CG21 123 aaPredicted RBP23.33■■□□□ 1.33
CMTM4-204ENST00000563952 EDN2P20800 178 aa23.33■■□□□ 1.33
CMTM4-204ENST00000563952 FAM106AQ4KMX7 169 aa23.33■■□□□ 1.33
CMTM4-204ENST00000563952 Q8N402 240 aa23.33■■□□□ 1.33
CMTM4-204ENST00000563952 VN1R17PQ8TDU5 208 aa23.33■■□□□ 1.33
CMTM4-204ENST00000563952 SOSTQ9BQB4 213 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms