RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 DUXBA0A1W2PPF3 345 aa12.17□□□□□ -0.46
USB1-208ENST00000563207 G3V318 75 aa12.17□□□□□ -0.46
USB1-208ENST00000563207 H3BUA1 57 aa12.17□□□□□ -0.46
USB1-208ENST00000563207 BRI3O95415 125 aa12.17□□□□□ -0.46
USB1-208ENST00000563207 SFT2D2O95562 160 aa12.17□□□□□ -0.46
USB1-208ENST00000563207 IGKV1-5P01602 117 aa12.17□□□□□ -0.46
USB1-208ENST00000563207 IGLV1-40P01703 118 aa12.17□□□□□ -0.46
USB1-208ENST00000563207 P0C879 139 aa12.17□□□□□ -0.46
USB1-208ENST00000563207 VAMP1P23763 118 aa12.17□□□□□ -0.46
USB1-208ENST00000563207 PSMB8P28062 276 aa12.17□□□□□ -0.46
USB1-208ENST00000563207 RAB25P57735 213 aa12.17□□□□□ -0.46
USB1-208ENST00000563207 ECSCRQ19T08 205 aa12.17□□□□□ -0.46
USB1-208ENST00000563207 CXorf66Q5JRM2 361 aaPredicted RBP12.17□□□□□ -0.46
USB1-208ENST00000563207 TMEM268Q5VZI3 342 aa12.17□□□□□ -0.46
USB1-208ENST00000563207 HSD17B13Q7Z5P4 300 aaPredicted RBP12.17□□□□□ -0.46
USB1-208ENST00000563207 ZNF429Q86V71 674 aa12.17□□□□□ -0.46
USB1-208ENST00000563207 SELENOHQ8IZQ5 122 aaKnown RBP12.17□□□□□ -0.46
USB1-208ENST00000563207 LRTM2Q8N967 370 aa12.17□□□□□ -0.46
USB1-208ENST00000563207 OR1L8Q8NGR8 309 aa12.17□□□□□ -0.46
USB1-208ENST00000563207 OR5B3Q8NH48 314 aa12.17□□□□□ -0.46
USB1-208ENST00000563207 OR4A16Q8NH70 328 aa12.17□□□□□ -0.46
USB1-208ENST00000563207 FAM103A1Q9BTL3 118 aaKnown RBP12.17□□□□□ -0.46
USB1-208ENST00000563207 C20orf85Q9H1P6 137 aa12.17□□□□□ -0.46
USB1-208ENST00000563207 SLA2Q9H6Q3 261 aa12.17□□□□□ -0.46
USB1-208ENST00000563207 TMEM14BQ9NUH8 114 aa12.17□□□□□ -0.46
USB1-208ENST00000563207 ZNF257Q9Y2Q1 563 aa12.17□□□□□ -0.46
USB1-208ENST00000563207 TRAV3A0A0B4J244 114 aa12.16□□□□□ -0.46
USB1-208ENST00000563207 A0A0B4J2A0 478 aa12.16□□□□□ -0.46
USB1-208ENST00000563207 A0A1W2PN81 502 aa12.16□□□□□ -0.46
USB1-208ENST00000563207 C15orf61A6NNL5 157 aa12.16□□□□□ -0.46
USB1-208ENST00000563207 CCL24O00175 119 aa12.16□□□□□ -0.46
USB1-208ENST00000563207 DUS4LO95620 317 aaKnown RBP12.16□□□□□ -0.46
USB1-208ENST00000563207 OR4E1P0C645 316 aa12.16□□□□□ -0.46
USB1-208ENST00000563207 OR9G9P0C7N8 305 aa12.16□□□□□ -0.46
USB1-208ENST00000563207 CHRNA7P36544 502 aa12.16□□□□□ -0.46
USB1-208ENST00000563207 MYCNOSP40205 109 aa12.16□□□□□ -0.46
USB1-208ENST00000563207 MECP2P51608 486 aaKnown RBP12.16□□□□□ -0.46
USB1-208ENST00000563207 PPP1R1AQ13522 171 aa12.16□□□□□ -0.46
USB1-208ENST00000563207 TMEM65Q6PI78 240 aa12.16□□□□□ -0.46
USB1-208ENST00000563207 DUSP18Q8NEJ0 188 aa12.16□□□□□ -0.46
USB1-208ENST00000563207 RNASE11Q8TAA1 199 aaKnown RBP12.16□□□□□ -0.46
USB1-208ENST00000563207 LHFPL5Q8TAF8 219 aa12.16□□□□□ -0.46
USB1-208ENST00000563207 ENKURQ8TC29 256 aa12.16□□□□□ -0.46
USB1-208ENST00000563207 QTRT1Q9BXR0 403 aaKnown RBP12.16□□□□□ -0.46
USB1-208ENST00000563207 PALMDQ9NP74 551 aa12.16□□□□□ -0.46
USB1-208ENST00000563207 SHPKQ9UHJ6 478 aa12.16□□□□□ -0.46
USB1-208ENST00000563207 FLVCR2Q9UPI3 526 aa12.16□□□□□ -0.46
USB1-208ENST00000563207 KMT2CQ8NEZ4 4911 aaKnown RBP12.16□□□□□ -0.46
USB1-208ENST00000563207 TEX50A0A1B0GTY4 177 aa12.15□□□□□ -0.46
USB1-208ENST00000563207 TRAPPC2P0DI81 140 aa12.15□□□□□ -0.46
USB1-208ENST00000563207 TRAPPC2BP0DI82 140 aa12.15□□□□□ -0.46
USB1-208ENST00000563207 OR2B8PP59922 312 aa12.15□□□□□ -0.46
USB1-208ENST00000563207 TTC9CQ8N5M4 171 aa12.15□□□□□ -0.46
USB1-208ENST00000563207 FYTTD1Q96QD9 318 aaKnown RBP12.15□□□□□ -0.46
USB1-208ENST00000563207 KLK15Q9H2R5 256 aa12.15□□□□□ -0.46
USB1-208ENST00000563207 NUDT15Q9NV35 164 aa12.15□□□□□ -0.46
USB1-208ENST00000563207 OR51B2Q9Y5P1 312 aa12.15□□□□□ -0.46
USB1-208ENST00000563207 C9orf170A2RU37 121 aa12.14□□□□□ -0.47
USB1-208ENST00000563207 NPIPB5A8MRT5 1133 aa12.14□□□□□ -0.47
USB1-208ENST00000563207 TEX22C9J3V5 150 aa12.14□□□□□ -0.47
USB1-208ENST00000563207 RBMXL2O75526 392 aaKnown RBP12.14□□□□□ -0.47
USB1-208ENST00000563207 DHFRP00374 187 aa12.14□□□□□ -0.47
USB1-208ENST00000563207 HLA-AP01891 365 aaKnown RBP12.14□□□□□ -0.47
USB1-208ENST00000563207 H2AFB2P0C5Z0 115 aa12.14□□□□□ -0.47
USB1-208ENST00000563207 RAB9AP51151 201 aa12.14□□□□□ -0.47
USB1-208ENST00000563207 HSPE1P61604 102 aaKnown RBP12.14□□□□□ -0.47
USB1-208ENST00000563207 DHRS2Q13268 280 aa12.14□□□□□ -0.47
USB1-208ENST00000563207 C4orf46Q504U0 113 aa12.14□□□□□ -0.47
USB1-208ENST00000563207 C10orf55Q5SWW7 151 aa12.14□□□□□ -0.47
USB1-208ENST00000563207 ASPHD1Q5U4P2 390 aa12.14□□□□□ -0.47
USB1-208ENST00000563207 LYG2Q86SG7 212 aa12.14□□□□□ -0.47
USB1-208ENST00000563207 SLC35G3Q8N808 338 aa12.14□□□□□ -0.47
USB1-208ENST00000563207 COQ8AQ8NI60 647 aa12.14□□□□□ -0.47
USB1-208ENST00000563207 NDUFA4L2Q9NRX3 87 aa12.14□□□□□ -0.47
USB1-208ENST00000563207 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.14□□□□□ -0.47
USB1-208ENST00000563207 COA4Q9NYJ1 87 aa12.14□□□□□ -0.47
USB1-208ENST00000563207 TMED3Q9Y3Q3 217 aa12.14□□□□□ -0.47
USB1-208ENST00000563207 TRAV6A0A075B6T7 132 aa12.13□□□□□ -0.47
USB1-208ENST00000563207 A0A0B4J293 547 aa12.13□□□□□ -0.47
USB1-208ENST00000563207 E7EUB6 86 aa12.13□□□□□ -0.47
USB1-208ENST00000563207 SOX15O60248 233 aa12.13□□□□□ -0.47
USB1-208ENST00000563207 CRYGCP07315 174 aa12.13□□□□□ -0.47
USB1-208ENST00000563207 ANXA7P20073 488 aaKnown RBP12.13□□□□□ -0.47
USB1-208ENST00000563207 CDX1P47902 265 aaPredicted RBP12.13□□□□□ -0.47
USB1-208ENST00000563207 KIAA0141Q14154 515 aaPredicted RBP12.13□□□□□ -0.47
USB1-208ENST00000563207 AARDQ4LEZ3 155 aa12.13□□□□□ -0.47
USB1-208ENST00000563207 OR5T1Q8NG75 326 aa12.13□□□□□ -0.47
USB1-208ENST00000563207 OR52E5Q8NH55 327 aa12.13□□□□□ -0.47
USB1-208ENST00000563207 MYOZ3Q8TDC0 251 aa12.13□□□□□ -0.47
USB1-208ENST00000563207 UBE2E2Q96LR5 201 aa12.13□□□□□ -0.47
USB1-208ENST00000563207 PDCD10Q9BUL8 212 aa12.13□□□□□ -0.47
USB1-208ENST00000563207 NSG2Q9Y328 171 aa12.13□□□□□ -0.47
USB1-208ENST00000563207 NBEAL2Q6ZNJ1 2754 aa12.13□□□□□ -0.47
USB1-208ENST00000563207 CGB1A6NKQ9 187 aa12.12□□□□□ -0.47
USB1-208ENST00000563207 SULT1A3P0DMM9 295 aa12.12□□□□□ -0.47
USB1-208ENST00000563207 SULT1A4P0DMN0 295 aa12.12□□□□□ -0.47
USB1-208ENST00000563207 SLC25A6P12236 298 aa12.12□□□□□ -0.47
USB1-208ENST00000563207 ANKRD55Q3KP44 614 aa12.12□□□□□ -0.47
USB1-208ENST00000563207 NMSQ5H8A3 153 aa12.12□□□□□ -0.47
USB1-208ENST00000563207 PLET1Q6UQ28 207 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms