RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 KHDC1LQ5JSQ8 128 aa7.6□□□□□ -1.19
CLK3-208ENST00000562626 TEX38Q6PEX7 206 aa7.6□□□□□ -1.19
CLK3-208ENST00000562626 ETV3LQ6ZN32 361 aa7.6□□□□□ -1.19
CLK3-208ENST00000562626 C8orf86Q6ZUL3 223 aa7.6□□□□□ -1.19
CLK3-208ENST00000562626 LYG2Q86SG7 212 aa7.6□□□□□ -1.19
CLK3-208ENST00000562626 ZNF695Q8IW36 515 aa7.6□□□□□ -1.19
CLK3-208ENST00000562626 FAM219AQ8IW50 185 aa7.6□□□□□ -1.19
CLK3-208ENST00000562626 ZNF491Q8N8L2 437 aa7.6□□□□□ -1.19
CLK3-208ENST00000562626 OR4X2Q8NGF9 303 aa7.6□□□□□ -1.19
CLK3-208ENST00000562626 FAM110DQ8TAY7 271 aaPredicted RBP7.6□□□□□ -1.19
CLK3-208ENST00000562626 OR5B12Q96R08 314 aa7.6□□□□□ -1.19
CLK3-208ENST00000562626 TSC22D3Q99576 134 aa7.6□□□□□ -1.19
CLK3-208ENST00000562626 HINT2Q9BX68 163 aa7.6□□□□□ -1.19
CLK3-208ENST00000562626 COMMD5Q9GZQ3 224 aa7.6□□□□□ -1.19
CLK3-208ENST00000562626 CACNG5Q9UF02 275 aa7.6□□□□□ -1.19
CLK3-208ENST00000562626 A0A0B4J2A0 478 aa7.59□□□□□ -1.19
CLK3-208ENST00000562626 CREBL2O60519 120 aaPredicted RBP7.59□□□□□ -1.19
CLK3-208ENST00000562626 SNAPC5O75971 98 aa7.59□□□□□ -1.19
CLK3-208ENST00000562626 ACTL6BO94805 426 aa7.59□□□□□ -1.19
CLK3-208ENST00000562626 IGHV3-11P01762 117 aa7.59□□□□□ -1.19
CLK3-208ENST00000562626 TRGV3P03979 118 aa7.59□□□□□ -1.19
CLK3-208ENST00000562626 ELANEP08246 267 aa7.59□□□□□ -1.19
CLK3-208ENST00000562626 H2AFB2P0C5Z0 115 aa7.59□□□□□ -1.19
CLK3-208ENST00000562626 TRAPPC2P0DI81 140 aa7.59□□□□□ -1.19
CLK3-208ENST00000562626 TRAPPC2BP0DI82 140 aa7.59□□□□□ -1.19
CLK3-208ENST00000562626 CTRB1P17538 263 aa7.59□□□□□ -1.19
CLK3-208ENST00000562626 PSMB6P28072 239 aa7.59□□□□□ -1.19
CLK3-208ENST00000562626 CXorf66Q5JRM2 361 aaPredicted RBP7.59□□□□□ -1.19
CLK3-208ENST00000562626 CTRB2Q6GPI1 263 aa7.59□□□□□ -1.19
CLK3-208ENST00000562626 MZT2BQ6NZ67 158 aa7.59□□□□□ -1.19
CLK3-208ENST00000562626 NDUFA11Q86Y39 141 aa7.59□□□□□ -1.19
CLK3-208ENST00000562626 LGI3Q8N145 548 aa7.59□□□□□ -1.19
CLK3-208ENST00000562626 TTC9CQ8N5M4 171 aa7.59□□□□□ -1.19
CLK3-208ENST00000562626 LRTM2Q8N967 370 aa7.59□□□□□ -1.19
CLK3-208ENST00000562626 KLHL30-AS1Q8NEE0 82 aa7.59□□□□□ -1.19
CLK3-208ENST00000562626 DUSP18Q8NEJ0 188 aa7.59□□□□□ -1.19
CLK3-208ENST00000562626 OR5M8Q8NGP6 311 aa7.59□□□□□ -1.19
CLK3-208ENST00000562626 OR1L8Q8NGR8 309 aa7.59□□□□□ -1.19
CLK3-208ENST00000562626 OR4A16Q8NH70 328 aa7.59□□□□□ -1.19
CLK3-208ENST00000562626 ENKURQ8TC29 256 aa7.59□□□□□ -1.19
CLK3-208ENST00000562626 IL22RA2Q969J5 263 aa7.59□□□□□ -1.19
CLK3-208ENST00000562626 LSM10Q969L4 123 aaKnown RBP7.59□□□□□ -1.19
CLK3-208ENST00000562626 FANCD2OSQ96PS1 177 aa7.59□□□□□ -1.19
CLK3-208ENST00000562626 SPIN2AQ99865 258 aa7.59□□□□□ -1.19
CLK3-208ENST00000562626 SPIN2BQ9BPZ2 258 aa7.59□□□□□ -1.19
CLK3-208ENST00000562626 AIFM2Q9BRQ8 373 aa7.59□□□□□ -1.19
CLK3-208ENST00000562626 COA4Q9NYJ1 87 aa7.59□□□□□ -1.19
CLK3-208ENST00000562626 SHPKQ9UHJ6 478 aa7.59□□□□□ -1.19
CLK3-208ENST00000562626 PRNDQ9UKY0 176 aa7.59□□□□□ -1.19
CLK3-208ENST00000562626 KCNIP3Q9Y2W7 256 aa7.59□□□□□ -1.19
CLK3-208ENST00000562626 TSSC4Q9Y5U2 329 aaPredicted RBP7.59□□□□□ -1.19
CLK3-208ENST00000562626 S4R3C0 116 aa7.59□□□□□ -1.19
CLK3-208ENST00000562626 TRBV9A0A0B4J1U6 114 aa7.58□□□□□ -1.2
CLK3-208ENST00000562626 CRYGCP07315 174 aa7.58□□□□□ -1.2
CLK3-208ENST00000562626 FGF2P09038 288 aa7.58□□□□□ -1.2
CLK3-208ENST00000562626 HOXB5P09067 269 aa7.58□□□□□ -1.2
CLK3-208ENST00000562626 TPPP2P59282 170 aa7.58□□□□□ -1.2
CLK3-208ENST00000562626 HSPE1P61604 102 aaKnown RBP7.58□□□□□ -1.2
CLK3-208ENST00000562626 PRCDQ00LT1 54 aa7.58□□□□□ -1.2
CLK3-208ENST00000562626 TMEM267Q0VDI3 215 aaPredicted RBP7.58□□□□□ -1.2
CLK3-208ENST00000562626 C2orf68Q2NKX9 166 aa7.58□□□□□ -1.2
CLK3-208ENST00000562626 AARDQ4LEZ3 155 aa7.58□□□□□ -1.2
CLK3-208ENST00000562626 C4orf46Q504U0 113 aa7.58□□□□□ -1.2
CLK3-208ENST00000562626 ZNF429Q86V71 674 aa7.58□□□□□ -1.2
CLK3-208ENST00000562626 COMMD1Q8N668 190 aa7.58□□□□□ -1.2
CLK3-208ENST00000562626 RNASE11Q8TAA1 199 aaKnown RBP7.58□□□□□ -1.2
CLK3-208ENST00000562626 RRNAD1Q96FB5 475 aaKnown RBP7.58□□□□□ -1.2
CLK3-208ENST00000562626 RAX2Q96IS3 184 aa7.58□□□□□ -1.2
CLK3-208ENST00000562626 GON7Q9BXV9 100 aa7.58□□□□□ -1.2
CLK3-208ENST00000562626 ZNF355PQ9NSJ1 428 aa7.58□□□□□ -1.2
CLK3-208ENST00000562626 IGLV11-55A0A075B6I3 123 aa7.57□□□□□ -1.2
CLK3-208ENST00000562626 NPIPB5A8MRT5 1133 aa7.57□□□□□ -1.2
CLK3-208ENST00000562626 I3L521 148 aa7.57□□□□□ -1.2
CLK3-208ENST00000562626 CCSO14618 274 aa7.57□□□□□ -1.2
CLK3-208ENST00000562626 PITX3O75364 302 aa7.57□□□□□ -1.2
CLK3-208ENST00000562626 OR2J3O76001 311 aa7.57□□□□□ -1.2
CLK3-208ENST00000562626 NDUFB8O95169 186 aa7.57□□□□□ -1.2
CLK3-208ENST00000562626 DUS4LO95620 317 aaKnown RBP7.57□□□□□ -1.2
CLK3-208ENST00000562626 TRBV12-3P01733 135 aa7.57□□□□□ -1.2
CLK3-208ENST00000562626 OR13C7P0DN81 318 aa7.57□□□□□ -1.2
CLK3-208ENST00000562626 ANXA3P12429 323 aa7.57□□□□□ -1.2
CLK3-208ENST00000562626 CDX1P47902 265 aaPredicted RBP7.57□□□□□ -1.2
CLK3-208ENST00000562626 KLK9Q2XQG4 91 aa7.57□□□□□ -1.2
CLK3-208ENST00000562626 GGNBP1Q5YKI7 109 aa7.57□□□□□ -1.2
CLK3-208ENST00000562626 OR2C3Q8N628 320 aa7.57□□□□□ -1.2
CLK3-208ENST00000562626 OR5B3Q8NH48 314 aa7.57□□□□□ -1.2
CLK3-208ENST00000562626 MITD1Q8WV92 249 aa7.57□□□□□ -1.2
CLK3-208ENST00000562626 TMEM170AQ8WVE7 144 aa7.57□□□□□ -1.2
CLK3-208ENST00000562626 OR10C1Q96KK4 312 aa7.57□□□□□ -1.2
CLK3-208ENST00000562626 KLK9Q9UKQ9 250 aa7.57□□□□□ -1.2
CLK3-208ENST00000562626 ZNF257Q9Y2Q1 563 aa7.57□□□□□ -1.2
CLK3-208ENST00000562626 IGHV4OR15-8A0A075B7B6 117 aa7.56□□□□□ -1.2
CLK3-208ENST00000562626 A0A087WW49 117 aa7.56□□□□□ -1.2
CLK3-208ENST00000562626 MFSD2BA6NFX1 497 aa7.56□□□□□ -1.2
CLK3-208ENST00000562626 NUDT19A8MXV4 375 aa7.56□□□□□ -1.2
CLK3-208ENST00000562626 BRI3O95415 125 aa7.56□□□□□ -1.2
CLK3-208ENST00000562626 IGHV3-23P01764 117 aa7.56□□□□□ -1.2
CLK3-208ENST00000562626 SULT1A3P0DMM9 295 aa7.56□□□□□ -1.2
CLK3-208ENST00000562626 SULT1A4P0DMN0 295 aa7.56□□□□□ -1.2
CLK3-208ENST00000562626 SRPXP78539 464 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms