RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 CASTOR1Q8WTX7 329 aa12.78□□□□□ -0.36
USB1-206ENST00000562534 KLK15Q9H2R5 256 aa12.78□□□□□ -0.36
USB1-206ENST00000562534 NUDT15Q9NV35 164 aa12.78□□□□□ -0.36
USB1-206ENST00000562534 TENM1Q9UKZ4 2725 aa12.77□□□□□ -0.36
USB1-206ENST00000562534 TRAV6A0A075B6T7 132 aa12.77□□□□□ -0.37
USB1-206ENST00000562534 HMX3A6NHT5 357 aa12.77□□□□□ -0.37
USB1-206ENST00000562534 NPIPB5A8MRT5 1133 aa12.77□□□□□ -0.37
USB1-206ENST00000562534 DUS4LO95620 317 aaKnown RBP12.77□□□□□ -0.37
USB1-206ENST00000562534 DHFRP00374 187 aa12.77□□□□□ -0.37
USB1-206ENST00000562534 HLA-AP01891 365 aaKnown RBP12.77□□□□□ -0.37
USB1-206ENST00000562534 CRYGCP07315 174 aa12.77□□□□□ -0.37
USB1-206ENST00000562534 APELAP0DMC3 54 aa12.77□□□□□ -0.37
USB1-206ENST00000562534 MYOD1P15172 320 aa12.77□□□□□ -0.37
USB1-206ENST00000562534 MECP2P51608 486 aaKnown RBP12.77□□□□□ -0.37
USB1-206ENST00000562534 RPL23AP62750 156 aaKnown RBP12.77□□□□□ -0.37
USB1-206ENST00000562534 C2orf68Q2NKX9 166 aa12.77□□□□□ -0.37
USB1-206ENST00000562534 NSUN5P1Q3KNT7 163 aa12.77□□□□□ -0.37
USB1-206ENST00000562534 KHDC1LQ5JSQ8 128 aa12.77□□□□□ -0.37
USB1-206ENST00000562534 LYZL2Q7Z4W2 148 aa12.77□□□□□ -0.37
USB1-206ENST00000562534 LYG2Q86SG7 212 aa12.77□□□□□ -0.37
USB1-206ENST00000562534 MRPL41Q8IXM3 137 aaKnown RBP12.77□□□□□ -0.37
USB1-206ENST00000562534 COQ8AQ8NI60 647 aa12.77□□□□□ -0.37
USB1-206ENST00000562534 GPR146Q96CH1 333 aa12.77□□□□□ -0.37
USB1-206ENST00000562534 UBE2E2Q96LR5 201 aa12.77□□□□□ -0.37
USB1-206ENST00000562534 PDCD10Q9BUL8 212 aa12.77□□□□□ -0.37
USB1-206ENST00000562534 COA4Q9NYJ1 87 aa12.77□□□□□ -0.37
USB1-206ENST00000562534 A0A0G2JLM5 398 aa12.76□□□□□ -0.37
USB1-206ENST00000562534 A0A1B0GW64 132 aa12.76□□□□□ -0.37
USB1-206ENST00000562534 CGB1A6NKQ9 187 aa12.76□□□□□ -0.37
USB1-206ENST00000562534 PSMB6P28072 239 aa12.76□□□□□ -0.37
USB1-206ENST00000562534 DHRS2Q13268 280 aa12.76□□□□□ -0.37
USB1-206ENST00000562534 IZUMO4Q1ZYL8 232 aa12.76□□□□□ -0.37
USB1-206ENST00000562534 ANKRD55Q3KP44 614 aa12.76□□□□□ -0.37
USB1-206ENST00000562534 Q6ZRM9 215 aa12.76□□□□□ -0.37
USB1-206ENST00000562534 ZNF491Q8N8L2 437 aa12.76□□□□□ -0.37
USB1-206ENST00000562534 MYOZ3Q8TDC0 251 aa12.76□□□□□ -0.37
USB1-206ENST00000562534 MS4A10Q96PG2 267 aa12.76□□□□□ -0.37
USB1-206ENST00000562534 HINT2Q9BX68 163 aa12.76□□□□□ -0.37
USB1-206ENST00000562534 PRR13Q9NZ81 148 aa12.76□□□□□ -0.37
USB1-206ENST00000562534 TMED3Q9Y3Q3 217 aa12.76□□□□□ -0.37
USB1-206ENST00000562534 A0A1B0GU03 582 aa12.75□□□□□ -0.37
USB1-206ENST00000562534 DBX1A6NMT0 343 aa12.75□□□□□ -0.37
USB1-206ENST00000562534 ADARB2-AS1A8MUL3 147 aa12.75□□□□□ -0.37
USB1-206ENST00000562534 CYB5BO43169 146 aa12.75□□□□□ -0.37
USB1-206ENST00000562534 IFNA17P01571 189 aa12.75□□□□□ -0.37
USB1-206ENST00000562534 TRGV3P03979 118 aa12.75□□□□□ -0.37
USB1-206ENST00000562534 DEFA4P12838 97 aa12.75□□□□□ -0.37
USB1-206ENST00000562534 KIAA0141Q14154 515 aaPredicted RBP12.75□□□□□ -0.37
USB1-206ENST00000562534 PLET1Q6UQ28 207 aa12.75□□□□□ -0.37
USB1-206ENST00000562534 LCNL1Q6ZST4 164 aa12.75□□□□□ -0.37
USB1-206ENST00000562534 NRARPQ7Z6K4 114 aa12.75□□□□□ -0.37
USB1-206ENST00000562534 OR4F17Q8NGA8 305 aa12.75□□□□□ -0.37
USB1-206ENST00000562534 OR52E5Q8NH55 327 aa12.75□□□□□ -0.37
USB1-206ENST00000562534 USMG5Q96IX5 58 aa12.75□□□□□ -0.37
USB1-206ENST00000562534 OR4F4Q96R69 305 aa12.75□□□□□ -0.37
USB1-206ENST00000562534 PALMDQ9NP74 551 aa12.75□□□□□ -0.37
USB1-206ENST00000562534 A0A0G2JRQ6 117 aa12.74□□□□□ -0.37
USB1-206ENST00000562534 A0A1W2PRX2 142 aa12.74□□□□□ -0.37
USB1-206ENST00000562534 IGLC7A0M8Q6 106 aa12.74□□□□□ -0.37
USB1-206ENST00000562534 NUDT19A8MXV4 375 aa12.74□□□□□ -0.37
USB1-206ENST00000562534 ST8SIA3O43173 380 aa12.74□□□□□ -0.37
USB1-206ENST00000562534 SULT1A3P0DMM9 295 aa12.74□□□□□ -0.37
USB1-206ENST00000562534 SULT1A4P0DMN0 295 aa12.74□□□□□ -0.37
USB1-206ENST00000562534 OR13C7P0DN81 318 aa12.74□□□□□ -0.37
USB1-206ENST00000562534 AREGP15514 252 aa12.74□□□□□ -0.37
USB1-206ENST00000562534 HIST1H1BP16401 226 aaKnown RBP12.74□□□□□ -0.37
USB1-206ENST00000562534 CTRB1P17538 263 aa12.74□□□□□ -0.37
USB1-206ENST00000562534 TPPP2P59282 170 aa12.74□□□□□ -0.37
USB1-206ENST00000562534 ERHP84090 104 aaKnown RBP12.74□□□□□ -0.37
USB1-206ENST00000562534 PRCDQ00LT1 54 aa12.74□□□□□ -0.37
USB1-206ENST00000562534 AARDQ4LEZ3 155 aa12.74□□□□□ -0.37
USB1-206ENST00000562534 NMSQ5H8A3 153 aa12.74□□□□□ -0.37
USB1-206ENST00000562534 HIST2H2BDQ6DRA6 164 aa12.74□□□□□ -0.37
USB1-206ENST00000562534 CTRB2Q6GPI1 263 aa12.74□□□□□ -0.37
USB1-206ENST00000562534 OR10W1Q8NGF6 305 aa12.74□□□□□ -0.37
USB1-206ENST00000562534 CACNG5Q9UF02 275 aa12.74□□□□□ -0.37
USB1-206ENST00000562534 TET2Q6N021 2002 aaPredicted RBP12.73□□□□□ -0.37
USB1-206ENST00000562534 TRBV9A0A0B4J1U6 114 aa12.73□□□□□ -0.37
USB1-206ENST00000562534 IFNA21P01568 189 aa12.73□□□□□ -0.37
USB1-206ENST00000562534 IL5P05113 134 aa12.73□□□□□ -0.37
USB1-206ENST00000562534 SLC25A6P12236 298 aa12.73□□□□□ -0.37
USB1-206ENST00000562534 SPCS3P61009 180 aa12.73□□□□□ -0.37
USB1-206ENST00000562534 SMCO1Q147U7 214 aa12.73□□□□□ -0.37
USB1-206ENST00000562534 KLK9Q2XQG4 91 aa12.73□□□□□ -0.37
USB1-206ENST00000562534 OR1L6Q8NGR2 347 aa12.73□□□□□ -0.37
USB1-206ENST00000562534 MITD1Q8WV92 249 aa12.73□□□□□ -0.37
USB1-206ENST00000562534 C4orf3Q8WVX3 66 aa12.73□□□□□ -0.37
USB1-206ENST00000562534 PLEKHA3Q9HB20 300 aa12.73□□□□□ -0.37
USB1-206ENST00000562534 THYN1Q9P016 225 aa12.73□□□□□ -0.37
USB1-206ENST00000562534 KLK9Q9UKQ9 250 aa12.73□□□□□ -0.37
USB1-206ENST00000562534 C13orf42A0A1B0GVH6 325 aa12.72□□□□□ -0.37
USB1-206ENST00000562534 FAM223BA6NKX1 122 aa12.72□□□□□ -0.37
USB1-206ENST00000562534 INS-IGF2F8WCM5 200 aa12.72□□□□□ -0.37
USB1-206ENST00000562534 HOXB5P09067 269 aa12.72□□□□□ -0.37
USB1-206ENST00000562534 WT1-ASQ06250 92 aa12.72□□□□□ -0.37
USB1-206ENST00000562534 PDLIM3Q53GG5 364 aaPredicted RBP12.72□□□□□ -0.37
USB1-206ENST00000562534 FAM223AQ8IWN6 122 aa12.72□□□□□ -0.37
USB1-206ENST00000562534 NECAP1Q8NC96 275 aa12.72□□□□□ -0.37
USB1-206ENST00000562534 KLHL30-AS1Q8NEE0 82 aa12.72□□□□□ -0.37
USB1-206ENST00000562534 ZNF431Q8TF32 576 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms