RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 TEX43Q6ZNM6 134 aa4.49□□□□□ -1.69
CAPN3-211ENST00000562199 ZNF550Q7Z398 422 aa4.49□□□□□ -1.69
CAPN3-211ENST00000562199 OR8B12Q8NGG6 310 aa4.49□□□□□ -1.69
CAPN3-211ENST00000562199 OR10D3Q8NH80 312 aa4.49□□□□□ -1.69
CAPN3-211ENST00000562199 TMEM255BQ8WV15 326 aa4.49□□□□□ -1.69
CAPN3-211ENST00000562199 ARPC1AQ92747 370 aa4.49□□□□□ -1.69
CAPN3-211ENST00000562199 HIST1H2BHQ93079 126 aa4.49□□□□□ -1.69
CAPN3-211ENST00000562199 WWC2-AS2Q96NR7 200 aa4.49□□□□□ -1.69
CAPN3-211ENST00000562199 HIST1H2BNQ99877 126 aa4.49□□□□□ -1.69
CAPN3-211ENST00000562199 HIST1H2BMQ99879 126 aa4.49□□□□□ -1.69
CAPN3-211ENST00000562199 RARRES2Q99969 163 aa4.49□□□□□ -1.69
CAPN3-211ENST00000562199 PBOV1Q9GZY1 135 aa4.49□□□□□ -1.69
CAPN3-211ENST00000562199 BANF2Q9H503 90 aa4.49□□□□□ -1.69
CAPN3-211ENST00000562199 SEC61A2Q9H9S3 476 aa4.49□□□□□ -1.69
CAPN3-211ENST00000562199 EDA2RQ9HAV5 297 aa4.49□□□□□ -1.69
CAPN3-211ENST00000562199 MEPEQ9NQ76 525 aaPredicted RBP4.49□□□□□ -1.69
CAPN3-211ENST00000562199 RPRMQ9NS64 109 aa4.49□□□□□ -1.69
CAPN3-211ENST00000562199 MDFICQ9P1T7 246 aa4.49□□□□□ -1.69
CAPN3-211ENST00000562199 Q9UFV3 132 aa4.49□□□□□ -1.69
CAPN3-211ENST00000562199 INSL5Q9Y5Q6 135 aa4.49□□□□□ -1.69
CAPN3-211ENST00000562199 INSIG2Q9Y5U4 225 aa4.49□□□□□ -1.69
CAPN3-211ENST00000562199 DOCK3Q8IZD9 2030 aa4.49□□□□□ -1.69
CAPN3-211ENST00000562199 CASP8AP2Q9UKL3 1982 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 LYRM9A8MSI8 78 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 FAM90A26D6RGX4 464 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 LYPD3O95274 346 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 SIX6O95475 246 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 NTN1O95631 604 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 CXorf1O96002 111 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 HMGN2P05204 90 aaKnown RBP4.48□□□□□ -1.69
CAPN3-211ENST00000562199 MRPL3P09001 348 aaKnown RBP4.48□□□□□ -1.69
CAPN3-211ENST00000562199 LIFP15018 202 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 NFYAP23511 347 aaPredicted RBP4.48□□□□□ -1.69
CAPN3-211ENST00000562199 NFYBP25208 207 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 GUCA1AP43080 201 aaPredicted RBP4.48□□□□□ -1.69
CAPN3-211ENST00000562199 SSR2P43308 183 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 FABP6P51161 128 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 APOC4P55056 127 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 RBM11P57052 281 aaKnown RBP4.48□□□□□ -1.69
CAPN3-211ENST00000562199 FXYD6P3P58550 94 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 SLC35A1P78382 337 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 LAGE3Q14657 143 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 ZNF146Q15072 292 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 LINC00303Q3SY05 128 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 TMEM255AQ5JRV8 349 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 PLPP4Q5VZY2 271 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 OR4C11Q6IEV9 310 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 KRTAP5-3Q6L8H2 238 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 CRIP3Q6Q6R5 217 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 Q6Q795 121 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 DNM1P46Q6ZS02 220 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 HMGN2P46Q86SG4 172 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 TEX29Q8N6K0 151 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 OR51G1Q8NGK1 321 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 OR5AK2Q8NH90 309 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 FGFBP3Q8TAT2 258 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 RPS4Y2Q8TD47 263 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 KLK6Q92876 244 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 SLC25A38Q96DW6 304 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 YPEL4Q96NS1 127 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 LINC01587Q99440 93 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 SDF2Q99470 211 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 SPIN2AQ99865 258 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 SPIN2BQ9BPZ2 258 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 PRSS27Q9BQR3 290 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 TM2D2Q9BX73 214 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 MRPL32Q9BYC8 188 aaKnown RBP4.48□□□□□ -1.69
CAPN3-211ENST00000562199 EXOSC3Q9NQT5 275 aaKnown RBP4.48□□□□□ -1.69
CAPN3-211ENST00000562199 PARP11Q9NR21 331 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 FKBP11Q9NYL4 201 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 RNF7Q9UBF6 113 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 IL36AQ9UHA7 158 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 TAC3Q9UHF0 121 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 PROCRQ9UNN8 238 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 COL4A2P08572 1712 aa4.48□□□□□ -1.69
CAPN3-211ENST00000562199 NUP210LQ5VU65 1888 aa4.47□□□□□ -1.69
CAPN3-211ENST00000562199 NUP214P35658 2090 aaPredicted RBP4.47□□□□□ -1.69
CAPN3-211ENST00000562199 CKAP5Q14008 2032 aa4.47□□□□□ -1.69
CAPN3-211ENST00000562199 IGLC7A0M8Q6 106 aa4.47□□□□□ -1.69
CAPN3-211ENST00000562199 GGT3PA6NGU5 568 aa4.47□□□□□ -1.69
CAPN3-211ENST00000562199 RIIAD1A6NNX1 92 aa4.47□□□□□ -1.69
CAPN3-211ENST00000562199 GGTLC3B5MD39 225 aa4.47□□□□□ -1.69
CAPN3-211ENST00000562199 F5H5P2 479 aa4.47□□□□□ -1.69
CAPN3-211ENST00000562199 J3QLW9 94 aa4.47□□□□□ -1.69
CAPN3-211ENST00000562199 OVOL1O14753 267 aa4.47□□□□□ -1.69
CAPN3-211ENST00000562199 TAX1BP3O14907 124 aa4.47□□□□□ -1.69
CAPN3-211ENST00000562199 IGHG2P01859 326 aa4.47□□□□□ -1.69
CAPN3-211ENST00000562199 PGA3P0DJD8 388 aa4.47□□□□□ -1.69
CAPN3-211ENST00000562199 IL9P15248 144 aa4.47□□□□□ -1.69
CAPN3-211ENST00000562199 COX5AP20674 150 aa4.47□□□□□ -1.69
CAPN3-211ENST00000562199 RPS4Y1P22090 263 aaKnown RBP4.47□□□□□ -1.69
CAPN3-211ENST00000562199 CTGFP29279 349 aa4.47□□□□□ -1.69
CAPN3-211ENST00000562199 FAUP35544 74 aaKnown RBP4.47□□□□□ -1.69
CAPN3-211ENST00000562199 ZNF136P52737 540 aa4.47□□□□□ -1.69
CAPN3-211ENST00000562199 NDUFV3P56181 108 aaKnown RBP4.47□□□□□ -1.69
CAPN3-211ENST00000562199 RPS11P62280 158 aaKnown RBP eCLIP4.47□□□□□ -1.69
CAPN3-211ENST00000562199 FAM201AQ5SY85 155 aa4.47□□□□□ -1.69
CAPN3-211ENST00000562199 ZNF660Q6AZW8 331 aaPredicted RBP4.47□□□□□ -1.69
CAPN3-211ENST00000562199 AMMECR1LQ6DCA0 310 aa4.47□□□□□ -1.69
CAPN3-211ENST00000562199 SLC48A1Q6P1K1 146 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms