RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 LPAR2Q9HBW0 351 aa11.51□□□□□ -0.57
VPS9D1-202ENST00000561976 GCM1Q9NP62 436 aa11.51□□□□□ -0.57
VPS9D1-202ENST00000561976 TBL2Q9Y4P3 447 aaKnown RBP11.51□□□□□ -0.57
VPS9D1-202ENST00000561976 TET2Q6N021 2002 aaPredicted RBP11.51□□□□□ -0.57
VPS9D1-202ENST00000561976 KNTC1P50748 2209 aa11.51□□□□□ -0.57
VPS9D1-202ENST00000561976 PTPRBP23467 1997 aa11.51□□□□□ -0.57
VPS9D1-202ENST00000561976 IGHV3OR15-7A0A075B7D8 119 aa11.51□□□□□ -0.57
VPS9D1-202ENST00000561976 TRGV8A0A0C4DH27 118 aa11.51□□□□□ -0.57
VPS9D1-202ENST00000561976 C15orf61A6NNL5 157 aa11.51□□□□□ -0.57
VPS9D1-202ENST00000561976 Q6ZT83 130 aa11.51□□□□□ -0.57
VPS9D1-202ENST00000561976 OR2Z1Q8NG97 314 aa11.51□□□□□ -0.57
VPS9D1-202ENST00000561976 FAM216AQ8WUB2 273 aa11.51□□□□□ -0.57
VPS9D1-202ENST00000561976 IFI27L2Q9H2X8 130 aa11.51□□□□□ -0.57
VPS9D1-202ENST00000561976 A0A1W2PNU3 283 aaPredicted RBP11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 KIR2DS2P43631 304 aa11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 COMPP49747 757 aaPredicted RBP11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 TIGITQ495A1 244 aa11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 WDR73Q6P4I2 378 aa11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 PPP1R35Q8TAP8 253 aa11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 FER1L6-AS2Q96M78 137 aa11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 PRO3102Q9H379 93 aa11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 PLEKHA3Q9HB20 300 aa11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 IL19Q9UHD0 177 aa11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 RNF114Q9Y508 228 aa11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 PRRC2CQ9Y520 2896 aaKnown RBP11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 OR7C2O60412 319 aa11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 MYOD1P15172 320 aa11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 HSPE1P61604 102 aaKnown RBP11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 COTL1Q14019 142 aa11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 FAM214BQ7L5A3 538 aa11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 FAM90A1Q86YD7 464 aa11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 ZNRF1Q8ND25 227 aa11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 OR4B1Q8NGF8 309 aa11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 FAM122AQ96E09 287 aa11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 SFXN3Q9BWM7 321 aa11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 NRN1Q9NPD7 142 aa11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 SERTAD4Q9NUC0 356 aa11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 SLC45A2Q9UMX9 530 aa11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 NBEAQ8NFP9 2946 aa11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 IGKV1D-17A0A075B6S4 117 aa11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 MGST3O14880 152 aa11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 ZNF253O75346 499 aa11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 IGKV3-15P01624 115 aa11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 MT-ND6P03923 174 aa11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 CECR9P0C854 216 aa11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 MGST1P10620 155 aaKnown RBP11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 AREGP15514 252 aa11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 SUMO1P63165 101 aaKnown RBP11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 ATP1A1-AS1Q5TC04 95 aa11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 OR4A47Q6IF82 309 aa11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 CORO2AQ92828 525 aa11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 RNF2Q99496 336 aa11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 NABP2Q9BQ15 211 aa11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 TMEM167BQ9NRX6 74 aa11.5□□□□□ -0.57
VPS9D1-202ENST00000561976 TFPI2P48307 235 aa11.49□□□□□ -0.57
VPS9D1-202ENST00000561976 LOXL3P58215 753 aa11.49□□□□□ -0.57
VPS9D1-202ENST00000561976 CX3CL1P78423 397 aa11.49□□□□□ -0.57
VPS9D1-202ENST00000561976 GAGE1Q13065 139 aa11.49□□□□□ -0.57
VPS9D1-202ENST00000561976 MRPL54Q6P161 138 aaKnown RBP11.49□□□□□ -0.57
VPS9D1-202ENST00000561976 AHRRA9YTQ3 701 aa11.49□□□□□ -0.57
VPS9D1-202ENST00000561976 PRR20EP86478 221 aa11.49□□□□□ -0.57
VPS9D1-202ENST00000561976 PRR20CP86479 221 aa11.49□□□□□ -0.57
VPS9D1-202ENST00000561976 PRR20DP86480 221 aa11.49□□□□□ -0.57
VPS9D1-202ENST00000561976 PRR20BP86481 221 aa11.49□□□□□ -0.57
VPS9D1-202ENST00000561976 PRR20AP86496 221 aa11.49□□□□□ -0.57
VPS9D1-202ENST00000561976 SPATA45Q537H7 98 aa11.49□□□□□ -0.57
VPS9D1-202ENST00000561976 C1orf229Q6ZS94 237 aaPredicted RBP11.49□□□□□ -0.57
VPS9D1-202ENST00000561976 OR10J4P0C629 311 aa11.48□□□□□ -0.57
VPS9D1-202ENST00000561976 LINC00869P0C866 280 aa11.48□□□□□ -0.57
VPS9D1-202ENST00000561976 UTF1Q5T230 341 aa11.48□□□□□ -0.57
VPS9D1-202ENST00000561976 TMEM136Q6ZRR5 245 aa11.48□□□□□ -0.57
VPS9D1-202ENST00000561976 TMEM178AQ8NBL3 297 aa11.48□□□□□ -0.57
VPS9D1-202ENST00000561976 KCNS1Q96KK3 526 aa11.48□□□□□ -0.57
VPS9D1-202ENST00000561976 RCHY1Q96PM5 261 aa11.48□□□□□ -0.57
VPS9D1-202ENST00000561976 CALYQ9NYX4 217 aa11.48□□□□□ -0.57
VPS9D1-202ENST00000561976 TECRQ9NZ01 308 aaKnown RBP11.48□□□□□ -0.57
VPS9D1-202ENST00000561976 GATA2P23769 480 aaPredicted RBP11.48□□□□□ -0.57
VPS9D1-202ENST00000561976 SRIP30626 198 aa11.48□□□□□ -0.57
VPS9D1-202ENST00000561976 OR10J3Q5JRS4 329 aa11.48□□□□□ -0.57
VPS9D1-202ENST00000561976 COL5A1-AS1Q5SY13 56 aa11.48□□□□□ -0.57
VPS9D1-202ENST00000561976 STARD4Q96DR4 205 aa11.48□□□□□ -0.57
VPS9D1-202ENST00000561976 SLC25A10Q9UBX3 287 aaPredicted RBP11.48□□□□□ -0.57
VPS9D1-202ENST00000561976 FOXA2Q9Y261 457 aaPredicted RBP11.48□□□□□ -0.57
VPS9D1-202ENST00000561976 A0A1W2PS18 150 aa11.47□□□□□ -0.57
VPS9D1-202ENST00000561976 MZT1Q08AG7 82 aa11.47□□□□□ -0.57
VPS9D1-202ENST00000561976 VWA1Q6PCB0 445 aa11.47□□□□□ -0.57
VPS9D1-202ENST00000561976 MOB3BQ86TA1 216 aa11.47□□□□□ -0.57
VPS9D1-202ENST00000561976 C1orf174Q8IYL3 243 aa11.47□□□□□ -0.57
VPS9D1-202ENST00000561976 DDB2Q92466 427 aa11.47□□□□□ -0.57
VPS9D1-202ENST00000561976 OSTCQ9NRP0 149 aa11.47□□□□□ -0.57
VPS9D1-202ENST00000561976 TMEM14BQ9NUH8 114 aa11.47□□□□□ -0.57
VPS9D1-202ENST00000561976 OR51B2Q9Y5P1 312 aa11.47□□□□□ -0.57
VPS9D1-202ENST00000561976 ZDBF2Q9HCK1 2354 aa11.47□□□□□ -0.57
VPS9D1-202ENST00000561976 F2RL2O00254 374 aa11.47□□□□□ -0.57
VPS9D1-202ENST00000561976 OR5G3P0C626 314 aa11.47□□□□□ -0.57
VPS9D1-202ENST00000561976 RAB7AP51149 207 aa11.47□□□□□ -0.57
VPS9D1-202ENST00000561976 IBA57Q5T440 356 aaKnown RBP11.47□□□□□ -0.57
VPS9D1-202ENST00000561976 NEUROG1Q92886 237 aa11.47□□□□□ -0.57
VPS9D1-202ENST00000561976 TXN2Q99757 166 aa11.47□□□□□ -0.57
VPS9D1-202ENST00000561976 IDI2-AS1Q9NZ38 188 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms