RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 SPTSSAQ969W0 71 aa15.53■□□□□ 0.08
RAB40C-206ENST00000561781 MRAP2Q96G30 205 aa15.53■□□□□ 0.08
RAB40C-206ENST00000561781 JMJD8Q96S16 334 aa15.53■□□□□ 0.08
RAB40C-206ENST00000561781 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.52■□□□□ 0.08
RAB40C-206ENST00000561781 LILRA5A6NI73 299 aa15.52■□□□□ 0.08
RAB40C-206ENST00000561781 USF1P22415 310 aaPredicted RBP15.52■□□□□ 0.08
RAB40C-206ENST00000561781 VWC2Q2TAL6 325 aa15.52■□□□□ 0.08
RAB40C-206ENST00000561781 TMEM97Q5BJF2 176 aa15.52■□□□□ 0.08
RAB40C-206ENST00000561781 IGHV5-51A0A0C4DH38 117 aa15.52■□□□□ 0.07
RAB40C-206ENST00000561781 H3BUT2 72 aa15.52■□□□□ 0.07
RAB40C-206ENST00000561781 SPINK2P20155 84 aa15.52■□□□□ 0.07
RAB40C-206ENST00000561781 RPL24P83731 157 aaKnown RBP15.52■□□□□ 0.07
RAB40C-206ENST00000561781 RNASEKQ6P5S7 137 aaKnown RBP15.52■□□□□ 0.07
RAB40C-206ENST00000561781 OR2T6Q8NHC8 308 aa15.52■□□□□ 0.07
RAB40C-206ENST00000561781 VSTM2AQ8TAG5 236 aa15.52■□□□□ 0.07
RAB40C-206ENST00000561781 C11orf52Q96A22 123 aa15.52■□□□□ 0.07
RAB40C-206ENST00000561781 NABP1Q96AH0 204 aa15.52■□□□□ 0.07
RAB40C-206ENST00000561781 FER1L6-AS2Q96M78 137 aa15.52■□□□□ 0.07
RAB40C-206ENST00000561781 OR2D2Q9H210 308 aa15.52■□□□□ 0.07
RAB40C-206ENST00000561781 OSTCQ9NRP0 149 aa15.52■□□□□ 0.07
RAB40C-206ENST00000561781 TNFRSF19Q9NS68 423 aa15.52■□□□□ 0.07
RAB40C-206ENST00000561781 ZNF835Q9Y2P0 537 aa15.52■□□□□ 0.07
RAB40C-206ENST00000561781 TRAV38-1A0A0B4J264 116 aa15.51■□□□□ 0.07
RAB40C-206ENST00000561781 SYS1-DBNDD2H3BUS1 97 aa15.51■□□□□ 0.07
RAB40C-206ENST00000561781 HSPB6O14558 160 aa15.51■□□□□ 0.07
RAB40C-206ENST00000561781 DUX1O43812 170 aa15.51■□□□□ 0.07
RAB40C-206ENST00000561781 RHBDL1O75783 438 aa15.51■□□□□ 0.07
RAB40C-206ENST00000561781 SUMO3P55854 103 aaPredicted RBP15.51■□□□□ 0.07
RAB40C-206ENST00000561781 FAM162BQ5T6X4 162 aa15.51■□□□□ 0.07
RAB40C-206ENST00000561781 MRPL21Q7Z2W9 205 aaKnown RBP15.51■□□□□ 0.07
RAB40C-206ENST00000561781 CT55Q8WUE5 264 aa15.51■□□□□ 0.07
RAB40C-206ENST00000561781 WDR54Q9H977 334 aa15.51■□□□□ 0.07
RAB40C-206ENST00000561781 ZNF331Q9NQX6 463 aaPredicted RBP15.51■□□□□ 0.07
RAB40C-206ENST00000561781 MED12Q93074 2177 aa15.51■□□□□ 0.07
RAB40C-206ENST00000561781 J3QR89 54 aa15.51■□□□□ 0.07
RAB40C-206ENST00000561781 K7EQM0 130 aa15.51■□□□□ 0.07
RAB40C-206ENST00000561781 CXorf1O96002 111 aa15.51■□□□□ 0.07
RAB40C-206ENST00000561781 HIST1H1EP10412 219 aaKnown RBP15.51■□□□□ 0.07
RAB40C-206ENST00000561781 RAC3P60763 192 aa15.51■□□□□ 0.07
RAB40C-206ENST00000561781 RASL11AQ6T310 242 aa15.51■□□□□ 0.07
RAB40C-206ENST00000561781 A0A0G2JLM5 398 aa15.5■□□□□ 0.07
RAB40C-206ENST00000561781 ZNF207O43670 478 aaKnown RBP15.5■□□□□ 0.07
RAB40C-206ENST00000561781 TLX3O43711 291 aaPredicted RBP15.5■□□□□ 0.07
RAB40C-206ENST00000561781 ARL14EPLP0DKL9 152 aa15.5■□□□□ 0.07
RAB40C-206ENST00000561781 SLC35B1P78383 322 aa15.5■□□□□ 0.07
RAB40C-206ENST00000561781 HES3Q5TGS1 186 aa15.5■□□□□ 0.07
RAB40C-206ENST00000561781 CCDC144NLQ6NUI1 221 aa15.5■□□□□ 0.07
RAB40C-206ENST00000561781 BPIFA4PQ86YQ2 179 aa15.5■□□□□ 0.07
RAB40C-206ENST00000561781 KCNIP1Q9NZI2 227 aa15.5■□□□□ 0.07
RAB40C-206ENST00000561781 C19orf25Q9UFG5 118 aaPredicted RBP15.5■□□□□ 0.07
RAB40C-206ENST00000561781 OR2W1Q9Y3N9 320 aa15.5■□□□□ 0.07
RAB40C-206ENST00000561781 TEX48A0A1B0GUV7 120 aa15.49■□□□□ 0.07
RAB40C-206ENST00000561781 PMS2P5A8MQ11 134 aa15.49■□□□□ 0.07
RAB40C-206ENST00000561781 SPACA3Q8IXA5 215 aa15.49■□□□□ 0.07
RAB40C-206ENST00000561781 KIR3DL3Q8N743 410 aa15.49■□□□□ 0.07
RAB40C-206ENST00000561781 OR2Z1Q8NG97 314 aa15.49■□□□□ 0.07
RAB40C-206ENST00000561781 DLL3Q9NYJ7 618 aa15.49■□□□□ 0.07
RAB40C-206ENST00000561781 IGHV5-10-1A0A0J9YXX1 117 aa15.49■□□□□ 0.07
RAB40C-206ENST00000561781 NTN3O00634 580 aaPredicted RBP15.49■□□□□ 0.07
RAB40C-206ENST00000561781 APOA2P02652 100 aa15.49■□□□□ 0.07
RAB40C-206ENST00000561781 ZNF718Q3SXZ3 478 aa15.49■□□□□ 0.07
RAB40C-206ENST00000561781 TMEM42Q69YG0 159 aa15.49■□□□□ 0.07
RAB40C-206ENST00000561781 FA2HQ7L5A8 372 aa15.49■□□□□ 0.07
RAB40C-206ENST00000561781 ZNF611Q8N823 705 aa15.49■□□□□ 0.07
RAB40C-206ENST00000561781 ZNF479Q96JC4 524 aa15.49■□□□□ 0.07
RAB40C-206ENST00000561781 SPATA25Q9BR10 227 aa15.49■□□□□ 0.07
RAB40C-206ENST00000561781 GEMIN7Q9H840 131 aaKnown RBP15.49■□□□□ 0.07
RAB40C-206ENST00000561781 TECRQ9NZ01 308 aaKnown RBP15.49■□□□□ 0.07
RAB40C-206ENST00000561781 PPP1R3CQ9UQK1 317 aa15.49■□□□□ 0.07
RAB40C-206ENST00000561781 SPCS1Q9Y6A9 102 aa15.49■□□□□ 0.07
RAB40C-206ENST00000561781 ATP23Q9Y6H3 246 aa15.49■□□□□ 0.07
RAB40C-206ENST00000561781 COL27A1Q8IZC6 1860 aaPredicted RBP15.48■□□□□ 0.07
RAB40C-206ENST00000561781 FAM90A10PA6NDY2 464 aa15.48■□□□□ 0.07
RAB40C-206ENST00000561781 FAM90A18PA6NE21 464 aa15.48■□□□□ 0.07
RAB40C-206ENST00000561781 FAM90A16PA6NEW6 464 aa15.48■□□□□ 0.07
RAB40C-206ENST00000561781 FAM90A20PA6NIJ5 464 aa15.48■□□□□ 0.07
RAB40C-206ENST00000561781 FAM90A8PA6NJQ4 464 aa15.48■□□□□ 0.07
RAB40C-206ENST00000561781 FAM90A7PA6NKC0 464 aa15.48■□□□□ 0.07
RAB40C-206ENST00000561781 FAM90A22PA8MWA6 464 aa15.48■□□□□ 0.07
RAB40C-206ENST00000561781 FAM90A12PA8MX19 464 aa15.48■□□□□ 0.07
RAB40C-206ENST00000561781 FAM90A5PA8MXJ8 464 aa15.48■□□□□ 0.07
RAB40C-206ENST00000561781 FAM90A23PA8MXZ1 464 aa15.48■□□□□ 0.07
RAB40C-206ENST00000561781 FAM90A15PP0C7V4 464 aa15.48■□□□□ 0.07
RAB40C-206ENST00000561781 FAM90A13PP0C7W8 464 aa15.48■□□□□ 0.07
RAB40C-206ENST00000561781 FAM90A14PP0C7W9 464 aa15.48■□□□□ 0.07
RAB40C-206ENST00000561781 FAM90A24PP0C7X0 464 aa15.48■□□□□ 0.07
RAB40C-206ENST00000561781 STAG3L2P0CL84 134 aa15.48■□□□□ 0.07
RAB40C-206ENST00000561781 RAB31Q13636 194 aa15.48■□□□□ 0.07
RAB40C-206ENST00000561781 PCSK4Q6UW60 755 aa15.48■□□□□ 0.07
RAB40C-206ENST00000561781 ZNF788Q6ZQV5 615 aa15.48■□□□□ 0.07
RAB40C-206ENST00000561781 FOXL2NBQ6ZUU3 175 aa15.48■□□□□ 0.07
RAB40C-206ENST00000561781 WIPF2Q8TF74 440 aaPredicted RBP15.48■□□□□ 0.07
RAB40C-206ENST00000561781 TSSC4Q9Y5U2 329 aaPredicted RBP15.48■□□□□ 0.07
RAB40C-206ENST00000561781 SMIM27A0A1W2PRY6 76 aa15.48■□□□□ 0.07
RAB40C-206ENST00000561781 ZNF391Q9UJN7 358 aa15.48■□□□□ 0.07
RAB40C-206ENST00000561781 IGHV3-20A0A0C4DH32 117 aa15.47■□□□□ 0.07
RAB40C-206ENST00000561781 A0A1W2PNU3 283 aaPredicted RBP15.47■□□□□ 0.07
RAB40C-206ENST00000561781 IZUMO1RA6ND01 250 aa15.47■□□□□ 0.07
RAB40C-206ENST00000561781 HBZP02008 142 aa15.47■□□□□ 0.07
RAB40C-206ENST00000561781 PERPQ96FX8 193 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms