RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 IGKV3OR2-268A0A0C4DH90 116 aa8.65□□□□□ -1.02
GTF3C1-202ENST00000561623 GATA2P23769 480 aaPredicted RBP8.65□□□□□ -1.02
GTF3C1-202ENST00000561623 QSER1Q2KHR3 1735 aa8.65□□□□□ -1.02
GTF3C1-202ENST00000561623 IGKV3D-11A0A0A0MRZ8 115 aa8.65□□□□□ -1.03
GTF3C1-202ENST00000561623 IGKV3-11P04433 115 aa8.65□□□□□ -1.03
GTF3C1-202ENST00000561623 IGFBP3P17936 291 aaPredicted RBP8.65□□□□□ -1.03
GTF3C1-202ENST00000561623 JKAMPQ9P055 326 aa8.65□□□□□ -1.03
GTF3C1-202ENST00000561623 ZNF146Q15072 292 aa8.65□□□□□ -1.03
GTF3C1-202ENST00000561623 TMEM54Q969K7 222 aa8.65□□□□□ -1.03
GTF3C1-202ENST00000561623 OR11H12B2RN74 326 aa8.64□□□□□ -1.03
GTF3C1-202ENST00000561623 AMBPP02760 352 aa8.64□□□□□ -1.03
GTF3C1-202ENST00000561623 UCP1P25874 307 aa8.64□□□□□ -1.03
GTF3C1-202ENST00000561623 GPR183P32249 361 aa8.64□□□□□ -1.03
GTF3C1-202ENST00000561623 SFTA2Q6UW10 78 aa8.64□□□□□ -1.03
GTF3C1-202ENST00000561623 OR11H1Q8NG94 326 aa8.64□□□□□ -1.03
GTF3C1-202ENST00000561623 OR11H2Q8NH07 326 aa8.64□□□□□ -1.03
GTF3C1-202ENST00000561623 GDF15Q99988 308 aa8.64□□□□□ -1.03
GTF3C1-202ENST00000561623 IGHV3-35A0A0C4DH35 117 aa8.64□□□□□ -1.03
GTF3C1-202ENST00000561623 OR5P3Q8WZ94 311 aa8.64□□□□□ -1.03
GTF3C1-202ENST00000561623 AICDAQ9GZX7 198 aa8.64□□□□□ -1.03
GTF3C1-202ENST00000561623 VSIRQ9H7M9 311 aa8.64□□□□□ -1.03
GTF3C1-202ENST00000561623 ID1P41134 155 aa8.64□□□□□ -1.03
GTF3C1-202ENST00000561623 RPS20P60866 119 aaKnown RBP8.64□□□□□ -1.03
GTF3C1-202ENST00000561623 KLF14Q8TD94 323 aaPredicted RBP8.64□□□□□ -1.03
GTF3C1-202ENST00000561623 GPR82Q96P67 336 aa8.64□□□□□ -1.03
GTF3C1-202ENST00000561623 SELENOKQ9Y6D0 94 aa8.64□□□□□ -1.03
GTF3C1-202ENST00000561623 JPT1Q9UK76 154 aa8.64□□□□□ -1.03
GTF3C1-202ENST00000561623 CD5P06127 495 aa8.64□□□□□ -1.03
GTF3C1-202ENST00000561623 CD55P08174 381 aa8.64□□□□□ -1.03
GTF3C1-202ENST00000561623 MC5RP33032 325 aa8.64□□□□□ -1.03
GTF3C1-202ENST00000561623 PGPEP1Q9NXJ5 209 aa8.64□□□□□ -1.03
GTF3C1-202ENST00000561623 SCN2AQ99250 2005 aa8.64□□□□□ -1.03
GTF3C1-202ENST00000561623 RP1P56715 2156 aa8.64□□□□□ -1.03
GTF3C1-202ENST00000561623 FOXI3A8MTJ6 420 aaPredicted RBP8.64□□□□□ -1.03
GTF3C1-202ENST00000561623 PEX7O00628 323 aa8.64□□□□□ -1.03
GTF3C1-202ENST00000561623 CA7P43166 264 aa8.64□□□□□ -1.03
GTF3C1-202ENST00000561623 PSG9Q00887 426 aa8.64□□□□□ -1.03
GTF3C1-202ENST00000561623 OR4C13Q8NGP0 309 aa8.64□□□□□ -1.03
GTF3C1-202ENST00000561623 MDC1Q14676 2089 aaKnown RBP8.63□□□□□ -1.03
GTF3C1-202ENST00000561623 IZUMO1RA6ND01 250 aa8.63□□□□□ -1.03
GTF3C1-202ENST00000561623 NUTF2P61970 127 aaKnown RBP8.63□□□□□ -1.03
GTF3C1-202ENST00000561623 FAM74A4Q5TZK3 123 aa8.63□□□□□ -1.03
GTF3C1-202ENST00000561623 TTC9CQ8N5M4 171 aa8.63□□□□□ -1.03
GTF3C1-202ENST00000561623 C19orf24Q9BVV8 132 aa8.63□□□□□ -1.03
GTF3C1-202ENST00000561623 EPOPA6NHQ4 379 aa8.63□□□□□ -1.03
GTF3C1-202ENST00000561623 METTL26Q96S19 204 aa8.63□□□□□ -1.03
GTF3C1-202ENST00000561623 SFXN3Q9BWM7 321 aa8.63□□□□□ -1.03
GTF3C1-202ENST00000561623 TMEM56-RWDD3S4R434 201 aa8.63□□□□□ -1.03
GTF3C1-202ENST00000561623 BRWD3Q6RI45 1802 aa8.63□□□□□ -1.03
GTF3C1-202ENST00000561623 PRR31Q5SQ13 230 aa8.63□□□□□ -1.03
GTF3C1-202ENST00000561623 C10orf126Q8N4M7 172 aa8.63□□□□□ -1.03
GTF3C1-202ENST00000561623 S4R3C0 116 aa8.63□□□□□ -1.03
GTF3C1-202ENST00000561623 J3QRE1 110 aa8.63□□□□□ -1.03
GTF3C1-202ENST00000561623 C19orf54Q5BKX5 351 aa8.63□□□□□ -1.03
GTF3C1-202ENST00000561623 ATP1A1-AS1Q5TC04 95 aa8.63□□□□□ -1.03
GTF3C1-202ENST00000561623 HIGD1CA8MV81 97 aa8.63□□□□□ -1.03
GTF3C1-202ENST00000561623 FAM169BQ8N8A8 192 aa8.63□□□□□ -1.03
GTF3C1-202ENST00000561623 ABHD17AQ96GS6 310 aa8.63□□□□□ -1.03
GTF3C1-202ENST00000561623 LOC390937A0A1W2PQ73 354 aa8.62□□□□□ -1.03
GTF3C1-202ENST00000561623 C19orf67A6NJJ6 358 aa8.62□□□□□ -1.03
GTF3C1-202ENST00000561623 APOMO95445 188 aa8.62□□□□□ -1.03
GTF3C1-202ENST00000561623 GPX4P36969 197 aaPredicted RBP8.62□□□□□ -1.03
GTF3C1-202ENST00000561623 FAM214BQ7L5A3 538 aa8.62□□□□□ -1.03
GTF3C1-202ENST00000561623 IGKV1D-13A0A0B4J2D9 117 aa8.62□□□□□ -1.03
GTF3C1-202ENST00000561623 C12orf77C9JDV5 145 aa8.62□□□□□ -1.03
GTF3C1-202ENST00000561623 NDUFA3O95167 84 aa8.62□□□□□ -1.03
GTF3C1-202ENST00000561623 IGKV1-13P0DP09 117 aa8.62□□□□□ -1.03
GTF3C1-202ENST00000561623 TMEM170BQ5T4T1 132 aa8.62□□□□□ -1.03
GTF3C1-202ENST00000561623 ZNRF1Q8ND25 227 aa8.62□□□□□ -1.03
GTF3C1-202ENST00000561623 DIRC2Q96SL1 478 aa8.62□□□□□ -1.03
GTF3C1-202ENST00000561623 RPP21Q9H633 154 aaKnown RBP8.62□□□□□ -1.03
GTF3C1-202ENST00000561623 CYTL1Q9NRR1 136 aa8.62□□□□□ -1.03
GTF3C1-202ENST00000561623 IGHV3OR16-13A0A075B7E8 117 aa8.62□□□□□ -1.03
GTF3C1-202ENST00000561623 IGHV3-74A0A0B4J1X5 117 aa8.62□□□□□ -1.03
GTF3C1-202ENST00000561623 TGFBR3LH3BV60 316 aa8.62□□□□□ -1.03
GTF3C1-202ENST00000561623 PYY3Q5JQD4 70 aa8.62□□□□□ -1.03
GTF3C1-202ENST00000561623 C10orf128Q5T292 105 aa8.62□□□□□ -1.03
GTF3C1-202ENST00000561623 IGHV3-23P01764 117 aa8.62□□□□□ -1.03
GTF3C1-202ENST00000561623 GNG5P63218 68 aa8.62□□□□□ -1.03
GTF3C1-202ENST00000561623 RFNGQ9Y644 331 aa8.62□□□□□ -1.03
GTF3C1-202ENST00000561623 ATAD5Q96QE3 1844 aa8.62□□□□□ -1.03
GTF3C1-202ENST00000561623 ATRXP46100 2492 aa8.62□□□□□ -1.03
GTF3C1-202ENST00000561623 GAS1P54826 345 aa8.62□□□□□ -1.03
GTF3C1-202ENST00000561623 IGLV3-21P80748 117 aaPredicted RBP8.62□□□□□ -1.03
GTF3C1-202ENST00000561623 A0A0A6YYD4 124 aa8.62□□□□□ -1.03
GTF3C1-202ENST00000561623 hCG_38984A0A1B0GV85 526 aa8.62□□□□□ -1.03
GTF3C1-202ENST00000561623 IFI6P09912 130 aa8.62□□□□□ -1.03
GTF3C1-202ENST00000561623 MFAP4P55083 255 aa8.62□□□□□ -1.03
GTF3C1-202ENST00000561623 LINC00114Q6XXX2 140 aa8.62□□□□□ -1.03
GTF3C1-202ENST00000561623 LRTM2Q8N967 370 aa8.62□□□□□ -1.03
GTF3C1-202ENST00000561623 FAM168AQ92567 244 aa8.62□□□□□ -1.03
GTF3C1-202ENST00000561623 UBR3Q6ZT12 1888 aa8.61□□□□□ -1.03
GTF3C1-202ENST00000561623 NAPSAO96009 420 aa8.61□□□□□ -1.03
GTF3C1-202ENST00000561623 NBEAP1P0C6P0 100 aa8.61□□□□□ -1.03
GTF3C1-202ENST00000561623 GNLYP22749 145 aa8.61□□□□□ -1.03
GTF3C1-202ENST00000561623 PTGDSP41222 190 aa8.61□□□□□ -1.03
GTF3C1-202ENST00000561623 SAPCD1Q5SSQ6 148 aa8.61□□□□□ -1.03
GTF3C1-202ENST00000561623 SYT8Q8NBV8 401 aa8.61□□□□□ -1.03
GTF3C1-202ENST00000561623 DEPPQ9NTK1 212 aa8.61□□□□□ -1.03
GTF3C1-202ENST00000561623 IGKV1D-8A0A087WSZ0 117 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms