RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 NQO2P16083 231 aa8.68□□□□□ -1.02
USP3-220ENST00000561381 TAS2R31P59538 309 aa8.68□□□□□ -1.02
USP3-220ENST00000561381 POU2AF1Q16633 256 aa8.68□□□□□ -1.02
USP3-220ENST00000561381 GIMAP1Q8WWP7 306 aa8.68□□□□□ -1.02
USP3-220ENST00000561381 GGTLC1Q9BX51 225 aa8.68□□□□□ -1.02
USP3-220ENST00000561381 LOC102724200A0A096LPH7 203 aaPredicted RBP8.67□□□□□ -1.02
USP3-220ENST00000561381 IGHV3-21A0A0B4J1V1 117 aa8.67□□□□□ -1.02
USP3-220ENST00000561381 ATP6V1G2O95670 118 aa8.67□□□□□ -1.02
USP3-220ENST00000561381 PTBP1P26599 531 aaKnown RBP eCLIP8.67□□□□□ -1.02
USP3-220ENST00000561381 GNRHRP30968 328 aa8.67□□□□□ -1.02
USP3-220ENST00000561381 TGFBR1P36897 503 aa8.67□□□□□ -1.02
USP3-220ENST00000561381 SCAND1P57086 179 aa8.67□□□□□ -1.02
USP3-220ENST00000561381 CATR1Q13166 79 aa8.67□□□□□ -1.02
USP3-220ENST00000561381 AADACL3Q5VUY0 350 aa8.67□□□□□ -1.02
USP3-220ENST00000561381 PLET1Q6UQ28 207 aa8.67□□□□□ -1.02
USP3-220ENST00000561381 DMBX1Q8NFW5 382 aa8.67□□□□□ -1.02
USP3-220ENST00000561381 OR5AP2Q8NGF4 316 aa8.67□□□□□ -1.02
USP3-220ENST00000561381 AIFM2Q9BRQ8 373 aa8.67□□□□□ -1.02
USP3-220ENST00000561381 QTRT1Q9BXR0 403 aaKnown RBP8.67□□□□□ -1.02
USP3-220ENST00000561381 YTHDF1Q9BYJ9 559 aaKnown RBP8.67□□□□□ -1.02
USP3-220ENST00000561381 COMMD5Q9GZQ3 224 aa8.67□□□□□ -1.02
USP3-220ENST00000561381 DIABLOQ9NR28 239 aa8.67□□□□□ -1.02
USP3-220ENST00000561381 ALMS1Q8TCU4 4167 aa8.66□□□□□ -1.02
USP3-220ENST00000561381 IGHV3OR16-8A0A075B7F1 116 aa8.66□□□□□ -1.02
USP3-220ENST00000561381 A0A0A6YYH2 397 aa8.66□□□□□ -1.02
USP3-220ENST00000561381 TEX50A0A1B0GTY4 177 aa8.66□□□□□ -1.02
USP3-220ENST00000561381 OR2T8A6NH00 312 aa8.66□□□□□ -1.02
USP3-220ENST00000561381 A6NJ64 397 aa8.66□□□□□ -1.02
USP3-220ENST00000561381 OR13C7P0DN81 318 aa8.66□□□□□ -1.02
USP3-220ENST00000561381 RFX2P48378 723 aa8.66□□□□□ -1.02
USP3-220ENST00000561381 MFAP2P55001 183 aa8.66□□□□□ -1.02
USP3-220ENST00000561381 EWSR1Q01844 656 aaKnown RBP eCLIP8.66□□□□□ -1.02
USP3-220ENST00000561381 WT1-ASQ06250 92 aa8.66□□□□□ -1.02
USP3-220ENST00000561381 NEDD8Q15843 81 aa8.66□□□□□ -1.02
USP3-220ENST00000561381 ANKRD55Q3KP44 614 aa8.66□□□□□ -1.02
USP3-220ENST00000561381 RBPMS2Q6ZRY4 209 aaKnown RBP8.66□□□□□ -1.02
USP3-220ENST00000561381 GDPD1Q8N9F7 314 aa8.66□□□□□ -1.02
USP3-220ENST00000561381 OR1L6Q8NGR2 347 aa8.66□□□□□ -1.02
USP3-220ENST00000561381 MARC2Q969Z3 335 aa8.66□□□□□ -1.02
USP3-220ENST00000561381 SRSF8Q9BRL6 282 aaKnown RBP8.66□□□□□ -1.02
USP3-220ENST00000561381 ZNF436Q9C0F3 470 aaPredicted RBP8.66□□□□□ -1.02
USP3-220ENST00000561381 PLEKHA2Q9HB19 425 aa8.66□□□□□ -1.02
USP3-220ENST00000561381 EHFQ9NZC4 300 aa8.66□□□□□ -1.02
USP3-220ENST00000561381 MRPL27Q9P0M9 148 aaKnown RBP8.66□□□□□ -1.02
USP3-220ENST00000561381 UBQLN2Q9UHD9 624 aa8.66□□□□□ -1.02
USP3-220ENST00000561381 NSG2Q9Y328 171 aa8.66□□□□□ -1.02
USP3-220ENST00000561381 UFC1Q9Y3C8 167 aa8.66□□□□□ -1.02
USP3-220ENST00000561381 TRAV25A0A0B4J276 109 aa8.65□□□□□ -1.02
USP3-220ENST00000561381 TGOLN2O43493 480 aa8.65□□□□□ -1.02
USP3-220ENST00000561381 PGLYRP1O75594 196 aaPredicted RBP8.65□□□□□ -1.02
USP3-220ENST00000561381 PMP2P02689 132 aa8.65□□□□□ -1.02
USP3-220ENST00000561381 RLN1P04808 185 aa8.65□□□□□ -1.02
USP3-220ENST00000561381 SERPINE2P07093 398 aa8.65□□□□□ -1.02
USP3-220ENST00000561381 TRAPPC2P0DI81 140 aa8.65□□□□□ -1.02
USP3-220ENST00000561381 TRAPPC2BP0DI82 140 aa8.65□□□□□ -1.02
USP3-220ENST00000561381 CBX5P45973 191 aa8.65□□□□□ -1.02
USP3-220ENST00000561381 HERV-K104P61576 105 aa8.65□□□□□ -1.02
USP3-220ENST00000561381 SLC25A24Q6NUK1 477 aa8.65□□□□□ -1.02
USP3-220ENST00000561381 VN1R17PQ8TDU5 208 aa8.65□□□□□ -1.02
USP3-220ENST00000561381 FCAMRQ8WWV6 532 aa8.65□□□□□ -1.02
USP3-220ENST00000561381 TMEM190Q8WZ59 177 aa8.65□□□□□ -1.02
USP3-220ENST00000561381 CHRDL1Q9BU40 450 aa8.65□□□□□ -1.02
USP3-220ENST00000561381 HINT2Q9BX68 163 aa8.65□□□□□ -1.02
USP3-220ENST00000561381 Q9H521 79 aa8.65□□□□□ -1.02
USP3-220ENST00000561381 IFT46Q9NQC8 304 aa8.65□□□□□ -1.02
USP3-220ENST00000561381 COMMD9Q9P000 198 aa8.65□□□□□ -1.02
USP3-220ENST00000561381 THYN1Q9P016 225 aa8.65□□□□□ -1.02
USP3-220ENST00000561381 A0A0J9YWU9 116 aa8.64□□□□□ -1.03
USP3-220ENST00000561381 MARCH11A6NNE9 402 aa8.64□□□□□ -1.03
USP3-220ENST00000561381 F8W735 103 aaPredicted RBP8.64□□□□□ -1.03
USP3-220ENST00000561381 XRCC3O43542 346 aa8.64□□□□□ -1.03
USP3-220ENST00000561381 ZNF207O43670 478 aaKnown RBP8.64□□□□□ -1.03
USP3-220ENST00000561381 H2AFB1P0C5Y9 115 aa8.64□□□□□ -1.03
USP3-220ENST00000561381 H2AFB2P0C5Z0 115 aa8.64□□□□□ -1.03
USP3-220ENST00000561381 G6PCP35575 357 aa8.64□□□□□ -1.03
USP3-220ENST00000561381 LPAR6P43657 344 aa8.64□□□□□ -1.03
USP3-220ENST00000561381 ELLP55199 621 aaPredicted RBP8.64□□□□□ -1.03
USP3-220ENST00000561381 ERVK-16P61578 105 aa8.64□□□□□ -1.03
USP3-220ENST00000561381 PMS2P11Q13670 270 aa8.64□□□□□ -1.03
USP3-220ENST00000561381 DHRS11Q6UWP2 260 aa8.64□□□□□ -1.03
USP3-220ENST00000561381 OR2C3Q8N628 320 aa8.64□□□□□ -1.03
USP3-220ENST00000561381 OR1L8Q8NGR8 309 aa8.64□□□□□ -1.03
USP3-220ENST00000561381 CD300LFQ8TDQ1 290 aa8.64□□□□□ -1.03
USP3-220ENST00000561381 MOB3AQ96BX8 217 aa8.64□□□□□ -1.03
USP3-220ENST00000561381 ZNF2Q9BSG1 426 aaPredicted RBP8.64□□□□□ -1.03
USP3-220ENST00000561381 C20orf24Q9BUV8 137 aa8.64□□□□□ -1.03
USP3-220ENST00000561381 C5orf66Q9H5L9 145 aa8.64□□□□□ -1.03
USP3-220ENST00000561381 NDUFA4L2Q9NRX3 87 aa8.64□□□□□ -1.03
USP3-220ENST00000561381 ANAPC10Q9UM13 185 aa8.64□□□□□ -1.03
USP3-220ENST00000561381 DBX1A6NMT0 343 aa8.63□□□□□ -1.03
USP3-220ENST00000561381 K7EIM0 57 aa8.63□□□□□ -1.03
USP3-220ENST00000561381 TSPAN4O14817 238 aa8.63□□□□□ -1.03
USP3-220ENST00000561381 KRASP01116 189 aa8.63□□□□□ -1.03
USP3-220ENST00000561381 FGF2P09038 288 aa8.63□□□□□ -1.03
USP3-220ENST00000561381 F2RP25116 425 aa8.63□□□□□ -1.03
USP3-220ENST00000561381 ADMP35318 185 aa8.63□□□□□ -1.03
USP3-220ENST00000561381 TAS2R20P59543 309 aa8.63□□□□□ -1.03
USP3-220ENST00000561381 DEFB135Q30KP9 77 aa8.63□□□□□ -1.03
USP3-220ENST00000561381 ODF3L2Q3SX64 289 aa8.63□□□□□ -1.03
USP3-220ENST00000561381 SCARB1Q8WTV0 552 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms