RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 IL1F10Q8WWZ1 152 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 SRSF12Q8WXF0 261 aaKnown RBP3.74□□□□□ -1.81
HERC1-213ENST00000561359 ACOT12Q8WYK0 555 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 EEF1AKMT3Q96AZ1 226 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 GALMQ96C23 342 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 ST6GAL2Q96JF0 529 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 HARBI1Q96MB7 349 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 FEVQ99581 238 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 SPIN2AQ99865 258 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 SPIN2BQ9BPZ2 258 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 METTL9Q9H1A3 318 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 GORASP2Q9H8Y8 452 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 EFCAB1Q9HAE3 211 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 SPACA1Q9HBV2 294 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 IFT46Q9NQC8 304 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 PAK1IP1Q9NWT1 392 aaPredicted RBP3.74□□□□□ -1.81
HERC1-213ENST00000561359 CLEC5AQ9NY25 188 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 TVP23BQ9NYZ1 205 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 CCDC59Q9P031 241 aaKnown RBP3.74□□□□□ -1.81
HERC1-213ENST00000561359 GNG8Q9UK08 70 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 A0A1W2PQL4 384 aaPredicted RBP3.73□□□□□ -1.81
HERC1-213ENST00000561359 GABRPO00591 440 aa3.73□□□□□ -1.81
HERC1-213ENST00000561359 CRYGBP07316 175 aa3.73□□□□□ -1.81
HERC1-213ENST00000561359 GIG44P09565 113 aaPredicted RBP3.73□□□□□ -1.81
HERC1-213ENST00000561359 SPART-AS1P0CW21 52 aa3.73□□□□□ -1.81
HERC1-213ENST00000561359 IL7P13232 177 aa3.73□□□□□ -1.81
HERC1-213ENST00000561359 EMP1P54849 157 aa3.73□□□□□ -1.81
HERC1-213ENST00000561359 KRTAP10-1P60331 282 aa3.73□□□□□ -1.81
HERC1-213ENST00000561359 CDK5Q00535 292 aa3.73□□□□□ -1.81
HERC1-213ENST00000561359 PRSS8Q16651 343 aa3.73□□□□□ -1.81
HERC1-213ENST00000561359 FAM98BQ52LJ0 330 aaKnown RBP3.73□□□□□ -1.81
HERC1-213ENST00000561359 TMEM41BQ5BJD5 291 aa3.73□□□□□ -1.81
HERC1-213ENST00000561359 LEMD1Q68G75 181 aa3.73□□□□□ -1.81
HERC1-213ENST00000561359 RAB12Q6IQ22 244 aa3.73□□□□□ -1.81
HERC1-213ENST00000561359 TMEM88Q6PEY1 159 aa3.73□□□□□ -1.81
HERC1-213ENST00000561359 ZNF773Q6PK81 442 aa3.73□□□□□ -1.81
HERC1-213ENST00000561359 PLET1Q6UQ28 207 aa3.73□□□□□ -1.81
HERC1-213ENST00000561359 ZNF66Q6ZN08 573 aa3.73□□□□□ -1.81
HERC1-213ENST00000561359 C19orf35Q6ZS72 473 aa3.73□□□□□ -1.81
HERC1-213ENST00000561359 FAM220AQ7Z4H9 259 aa3.73□□□□□ -1.81
HERC1-213ENST00000561359 BCDIN3DQ7Z5W3 292 aaKnown RBP3.73□□□□□ -1.81
HERC1-213ENST00000561359 TCTE3Q8IZS6 198 aa3.73□□□□□ -1.81
HERC1-213ENST00000561359 GBGT1Q8N5D6 347 aa3.73□□□□□ -1.81
HERC1-213ENST00000561359 TTC9CQ8N5M4 171 aa3.73□□□□□ -1.81
HERC1-213ENST00000561359 ZNF383Q8NA42 475 aa3.73□□□□□ -1.81
HERC1-213ENST00000561359 OR2G2Q8NGZ5 317 aa3.73□□□□□ -1.81
HERC1-213ENST00000561359 NSMCE2Q96MF7 247 aa3.73□□□□□ -1.81
HERC1-213ENST00000561359 S100A13Q99584 98 aa3.73□□□□□ -1.81
HERC1-213ENST00000561359 C12orf57Q99622 126 aa3.73□□□□□ -1.81
HERC1-213ENST00000561359 C20orf24Q9BUV8 137 aa3.73□□□□□ -1.81
HERC1-213ENST00000561359 REEP1Q9H902 201 aa3.73□□□□□ -1.81
HERC1-213ENST00000561359 DAZ1Q9NQZ3 744 aaKnown RBP3.73□□□□□ -1.81
HERC1-213ENST00000561359 SLC35D1Q9NTN3 355 aa3.73□□□□□ -1.81
HERC1-213ENST00000561359 TMEM14BQ9NUH8 114 aa3.73□□□□□ -1.81
HERC1-213ENST00000561359 CBY1Q9Y3M2 126 aa3.73□□□□□ -1.81
HERC1-213ENST00000561359 PEX16Q9Y5Y5 336 aa3.73□□□□□ -1.81
HERC1-213ENST00000561359 IGHV3OR16-8A0A075B7F1 116 aa3.72□□□□□ -1.81
HERC1-213ENST00000561359 TRBV7-1A0A0A6YYK4 115 aa3.72□□□□□ -1.81
HERC1-213ENST00000561359 ZNF207O43670 478 aaKnown RBP3.72□□□□□ -1.81
HERC1-213ENST00000561359 CA11O75493 328 aa3.72□□□□□ -1.81
HERC1-213ENST00000561359 GPX5O75715 221 aa3.72□□□□□ -1.81
HERC1-213ENST00000561359 APOA1P02647 267 aa3.72□□□□□ -1.81
HERC1-213ENST00000561359 ISG15P05161 165 aa3.72□□□□□ -1.81
HERC1-213ENST00000561359 GTF2F2P13984 249 aa3.72□□□□□ -1.81
HERC1-213ENST00000561359 PSMB6P28072 239 aa3.72□□□□□ -1.81
HERC1-213ENST00000561359 GPR183P32249 361 aa3.72□□□□□ -1.81
HERC1-213ENST00000561359 CAPGP40121 348 aa3.72□□□□□ -1.81
HERC1-213ENST00000561359 ASIPP42127 132 aa3.72□□□□□ -1.81
HERC1-213ENST00000561359 GBX2P52951 348 aaPredicted RBP3.72□□□□□ -1.81
HERC1-213ENST00000561359 DEFA1P59665 94 aa3.72□□□□□ -1.81
HERC1-213ENST00000561359 DEFA3P59666 94 aa3.72□□□□□ -1.81
HERC1-213ENST00000561359 DEFB131AP59861 70 aa3.72□□□□□ -1.81
HERC1-213ENST00000561359 PSME3P61289 254 aa3.72□□□□□ -1.81
HERC1-213ENST00000561359 VMA21Q3ZAQ7 101 aa3.72□□□□□ -1.81
HERC1-213ENST00000561359 TP53I3Q53FA7 332 aa3.72□□□□□ -1.81
HERC1-213ENST00000561359 Q5BKY6 102 aa3.72□□□□□ -1.81
HERC1-213ENST00000561359 HES5Q5TA89 166 aa3.72□□□□□ -1.81
HERC1-213ENST00000561359 SUMO4Q6EEV6 95 aa3.72□□□□□ -1.81
HERC1-213ENST00000561359 SSX9Q7RTT3 188 aa3.72□□□□□ -1.81
HERC1-213ENST00000561359 OR10H4Q8NGA5 316 aa3.72□□□□□ -1.81
HERC1-213ENST00000561359 OR4D10Q8NGI6 311 aa3.72□□□□□ -1.81
HERC1-213ENST00000561359 SETD6Q8TBK2 473 aa3.72□□□□□ -1.81
HERC1-213ENST00000561359 TMEM190Q8WZ59 177 aa3.72□□□□□ -1.81
HERC1-213ENST00000561359 CMTM3Q96MX0 182 aa3.72□□□□□ -1.81
HERC1-213ENST00000561359 SRSF8Q9BRL6 282 aaKnown RBP3.72□□□□□ -1.81
HERC1-213ENST00000561359 SEC22CQ9BRL7 303 aa3.72□□□□□ -1.81
HERC1-213ENST00000561359 MRPS18AQ9NVS2 196 aaKnown RBP3.72□□□□□ -1.81
HERC1-213ENST00000561359 SMPD3Q9NY59 655 aaPredicted RBP3.72□□□□□ -1.81
HERC1-213ENST00000561359 ABRACLQ9P1F3 81 aa3.72□□□□□ -1.81
HERC1-213ENST00000561359 ABCD2Q9UBJ2 740 aa3.72□□□□□ -1.81
HERC1-213ENST00000561359 ZNF257Q9Y2Q1 563 aa3.72□□□□□ -1.81
HERC1-213ENST00000561359 MRPS7Q9Y2R9 242 aaKnown RBP3.72□□□□□ -1.81
HERC1-213ENST00000561359 KCNK7Q9Y2U2 307 aa3.72□□□□□ -1.81
HERC1-213ENST00000561359 A0A1W2PP11 408 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 MFSD2BA6NFX1 497 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 SRRM4A7MD48 611 aaKnown RBP3.71□□□□□ -1.82
HERC1-213ENST00000561359 LINC00587B1AMM8 73 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 M0R1X1 148 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 WRBO00258 174 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 PRKYO43930 277 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms