RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 GDPD1Q8N9F7 314 aa13□□□□□ -0.33
CDC42BPB-208ENST00000561271 ZNF502Q8TBZ5 544 aa13□□□□□ -0.33
CDC42BPB-208ENST00000561271 AP3S1Q92572 193 aa13□□□□□ -0.33
CDC42BPB-208ENST00000561271 CXorf58Q96LI9 332 aa13□□□□□ -0.33
CDC42BPB-208ENST00000561271 PLEKHA3Q9HB20 300 aa13□□□□□ -0.33
CDC42BPB-208ENST00000561271 TRBV7-1A0A0A6YYK4 115 aa12.99□□□□□ -0.33
CDC42BPB-208ENST00000561271 ZNF320A2RRD8 509 aa12.99□□□□□ -0.33
CDC42BPB-208ENST00000561271 TMEM213A2RRL7 107 aa12.99□□□□□ -0.33
CDC42BPB-208ENST00000561271 DEFB114Q30KQ6 69 aa12.99□□□□□ -0.33
CDC42BPB-208ENST00000561271 TBC1D26Q86UD7 250 aa12.99□□□□□ -0.33
CDC42BPB-208ENST00000561271 GPHB5Q86YW7 130 aa12.99□□□□□ -0.33
CDC42BPB-208ENST00000561271 OR1L8Q8NGR8 309 aa12.99□□□□□ -0.33
CDC42BPB-208ENST00000561271 EXTL2Q9UBQ6 330 aa12.99□□□□□ -0.33
CDC42BPB-208ENST00000561271 OR51B2Q9Y5P1 312 aa12.99□□□□□ -0.33
CDC42BPB-208ENST00000561271 RYR3Q15413 4870 aa12.98□□□□□ -0.33
CDC42BPB-208ENST00000561271 DBX1A6NMT0 343 aa12.98□□□□□ -0.33
CDC42BPB-208ENST00000561271 A8MWP6 167 aa12.98□□□□□ -0.33
CDC42BPB-208ENST00000561271 SNAPC5O75971 98 aa12.98□□□□□ -0.33
CDC42BPB-208ENST00000561271 SERPINE2P07093 398 aa12.98□□□□□ -0.33
CDC42BPB-208ENST00000561271 ZNF182P17025 639 aaPredicted RBP12.98□□□□□ -0.33
CDC42BPB-208ENST00000561271 S100GP29377 79 aa12.98□□□□□ -0.33
CDC42BPB-208ENST00000561271 MFAP2P55001 183 aa12.98□□□□□ -0.33
CDC42BPB-208ENST00000561271 GUCA2BQ16661 112 aa12.98□□□□□ -0.33
CDC42BPB-208ENST00000561271 UNQ9165/PRO28630Q6UXU0 137 aa12.98□□□□□ -0.33
CDC42BPB-208ENST00000561271 SLC38A6Q8IZM9 456 aa12.98□□□□□ -0.33
CDC42BPB-208ENST00000561271 OR52I2Q8NH67 350 aa12.98□□□□□ -0.33
CDC42BPB-208ENST00000561271 LSM10Q969L4 123 aaKnown RBP12.98□□□□□ -0.33
CDC42BPB-208ENST00000561271 WDR89Q96FK6 387 aaPredicted RBP12.98□□□□□ -0.33
CDC42BPB-208ENST00000561271 MRPS26Q9BYN8 205 aaKnown RBP12.98□□□□□ -0.33
CDC42BPB-208ENST00000561271 WFDC10AQ9H1F0 79 aa12.98□□□□□ -0.33
CDC42BPB-208ENST00000561271 TUBA4BQ9H853 241 aa12.98□□□□□ -0.33
CDC42BPB-208ENST00000561271 NDUFA4L2Q9NRX3 87 aa12.98□□□□□ -0.33
CDC42BPB-208ENST00000561271 IGHV3-35A0A0C4DH35 117 aa12.97□□□□□ -0.33
CDC42BPB-208ENST00000561271 C15orf61A6NNL5 157 aa12.97□□□□□ -0.33
CDC42BPB-208ENST00000561271 ZNF785A8K8V0 405 aa12.97□□□□□ -0.33
CDC42BPB-208ENST00000561271 CLEC3BP05452 202 aa12.97□□□□□ -0.33
CDC42BPB-208ENST00000561271 CD7P09564 240 aa12.97□□□□□ -0.33
CDC42BPB-208ENST00000561271 CBLN1P23435 193 aa12.97□□□□□ -0.33
CDC42BPB-208ENST00000561271 FAM106AQ4KMX7 169 aa12.97□□□□□ -0.33
CDC42BPB-208ENST00000561271 LPCAT3Q6P1A2 487 aa12.97□□□□□ -0.33
CDC42BPB-208ENST00000561271 HSD17B13Q7Z5P4 300 aaPredicted RBP12.97□□□□□ -0.33
CDC42BPB-208ENST00000561271 GPR141Q7Z602 305 aa12.97□□□□□ -0.33
CDC42BPB-208ENST00000561271 LAX1Q8IWV1 398 aa12.97□□□□□ -0.33
CDC42BPB-208ENST00000561271 NEURL2Q9BR09 285 aa12.97□□□□□ -0.33
CDC42BPB-208ENST00000561271 THYN1Q9P016 225 aa12.97□□□□□ -0.33
CDC42BPB-208ENST00000561271 KLK11Q9UBX7 282 aa12.97□□□□□ -0.33
CDC42BPB-208ENST00000561271 MLXQ9UH92 298 aa12.97□□□□□ -0.33
CDC42BPB-208ENST00000561271 IGHV3-21A0A0B4J1V1 117 aa12.96□□□□□ -0.33
CDC42BPB-208ENST00000561271 C3orf84H3BNL1 204 aa12.96□□□□□ -0.33
CDC42BPB-208ENST00000561271 IGKV1-39P01597 117 aa12.96□□□□□ -0.33
CDC42BPB-208ENST00000561271 IGKV1D-39P04432 117 aa12.96□□□□□ -0.33
CDC42BPB-208ENST00000561271 PI3P19957 117 aa12.96□□□□□ -0.33
CDC42BPB-208ENST00000561271 UCP3P55916 312 aa12.96□□□□□ -0.33
CDC42BPB-208ENST00000561271 HAGHQ16775 308 aa12.96□□□□□ -0.33
CDC42BPB-208ENST00000561271 TM4SF20Q53R12 229 aa12.96□□□□□ -0.33
CDC42BPB-208ENST00000561271 RNASE10Q5GAN6 216 aaKnown RBP12.96□□□□□ -0.33
CDC42BPB-208ENST00000561271 SLC25A24Q6NUK1 477 aa12.96□□□□□ -0.33
CDC42BPB-208ENST00000561271 TMEM61Q8N0U2 210 aa12.96□□□□□ -0.33
CDC42BPB-208ENST00000561271 MUC7Q8TAX7 377 aa12.96□□□□□ -0.33
CDC42BPB-208ENST00000561271 MRGPRFQ96AM1 343 aa12.96□□□□□ -0.33
CDC42BPB-208ENST00000561271 TMEM14BQ9NUH8 114 aa12.96□□□□□ -0.33
CDC42BPB-208ENST00000561271 SLC2A8Q9NY64 477 aa12.96□□□□□ -0.33
CDC42BPB-208ENST00000561271 TECRQ9NZ01 308 aaKnown RBP12.96□□□□□ -0.33
CDC42BPB-208ENST00000561271 PRNDQ9UKY0 176 aa12.96□□□□□ -0.33
CDC42BPB-208ENST00000561271 F11RQ9Y624 299 aaKnown RBP12.96□□□□□ -0.33
CDC42BPB-208ENST00000561271 OR2T8A6NH00 312 aa12.95□□□□□ -0.34
CDC42BPB-208ENST00000561271 CYB5BO43169 146 aa12.95□□□□□ -0.34
CDC42BPB-208ENST00000561271 TGOLN2O43493 480 aa12.95□□□□□ -0.34
CDC42BPB-208ENST00000561271 TPPPO94811 219 aa12.95□□□□□ -0.34
CDC42BPB-208ENST00000561271 CD3DP04234 171 aa12.95□□□□□ -0.34
CDC42BPB-208ENST00000561271 PGAM2P15259 253 aa12.95□□□□□ -0.34
CDC42BPB-208ENST00000561271 PTBP1P26599 531 aaKnown RBP eCLIP12.95□□□□□ -0.34
CDC42BPB-208ENST00000561271 ALDH3B2P48448 385 aa12.95□□□□□ -0.34
CDC42BPB-208ENST00000561271 PPP5CP53041 499 aa12.95□□□□□ -0.34
CDC42BPB-208ENST00000561271 SPCS2Q15005 226 aa12.95□□□□□ -0.34
CDC42BPB-208ENST00000561271 PLET1Q6UQ28 207 aa12.95□□□□□ -0.34
CDC42BPB-208ENST00000561271 BTNL8Q6UX41 500 aa12.95□□□□□ -0.34
CDC42BPB-208ENST00000561271 CADM3Q8N126 398 aa12.95□□□□□ -0.34
CDC42BPB-208ENST00000561271 UXS1Q8NBZ7 420 aa12.95□□□□□ -0.34
CDC42BPB-208ENST00000561271 VN1R17PQ8TDU5 208 aa12.95□□□□□ -0.34
CDC42BPB-208ENST00000561271 SEC22AQ96IW7 307 aa12.95□□□□□ -0.34
CDC42BPB-208ENST00000561271 ABHD1Q96SE0 405 aa12.95□□□□□ -0.34
CDC42BPB-208ENST00000561271 SPATA25Q9BR10 227 aa12.95□□□□□ -0.34
CDC42BPB-208ENST00000561271 MIXL1Q9H2W2 232 aa12.95□□□□□ -0.34
CDC42BPB-208ENST00000561271 FAM212BQ9NTI7 297 aaPredicted RBP12.95□□□□□ -0.34
CDC42BPB-208ENST00000561271 IFNA6P05013 189 aa12.94□□□□□ -0.34
CDC42BPB-208ENST00000561271 ZNF57Q68EA5 555 aaPredicted RBP12.94□□□□□ -0.34
CDC42BPB-208ENST00000561271 LHFPL1Q86WI0 220 aa12.94□□□□□ -0.34
CDC42BPB-208ENST00000561271 DEFB125Q8N687 156 aa12.94□□□□□ -0.34
CDC42BPB-208ENST00000561271 OR4D10Q8NGI6 311 aa12.94□□□□□ -0.34
CDC42BPB-208ENST00000561271 OR5B3Q8NH48 314 aa12.94□□□□□ -0.34
CDC42BPB-208ENST00000561271 CITED4Q96RK1 184 aa12.94□□□□□ -0.34
CDC42BPB-208ENST00000561271 TSC22D3Q99576 134 aa12.94□□□□□ -0.34
CDC42BPB-208ENST00000561271 RETNQ9HD89 108 aa12.94□□□□□ -0.34
CDC42BPB-208ENST00000561271 MTFP1Q9UDX5 166 aa12.94□□□□□ -0.34
CDC42BPB-208ENST00000561271 CEPT1Q9Y6K0 416 aa12.94□□□□□ -0.34
CDC42BPB-208ENST00000561271 RGS5O15539 181 aa12.93□□□□□ -0.34
CDC42BPB-208ENST00000561271 SCAF4O95104 1147 aaKnown RBP12.93□□□□□ -0.34
CDC42BPB-208ENST00000561271 H2BFWTQ7Z2G1 175 aa12.93□□□□□ -0.34
CDC42BPB-208ENST00000561271 ARRDC1Q8N5I2 433 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms