RNA–Protein interactions for RNA: ENST00000561235.5

TCF12-223, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-223	ENST00000561235	SIGMAR1	Q99720	223 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	C20orf144	Q9BQM9	153 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	PSMG3	Q9BT73	122 aa	Predicted RBP	3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	CHAC1	Q9BUX1	264 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	SPANXD	Q9BXN6	97 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	MS4A8	Q9BY19	250 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	SMDT1	Q9H4I9	107 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	EXOSC4	Q9NPD3	245 aa	Known RBP	3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	FBXO6	Q9NRD1	293 aa	Predicted RBP	3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	UBQLN4	Q9NRR5	601 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	TMEM38B	Q9NVV0	291 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	CES1P1	Q9UKY3	287 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	OR51B2	Q9Y5P1	312 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	SPG11	Q96JI7	2443 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	IGSF9B	Q9UPX0	1349 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	LCT	P09848	1927 aa		3.36	□□□□□ -1.87
TCF12-223	ENST00000561235	ATM	Q13315	3056 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	LAMA4	Q16363	1823 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	IGKV6D-21	A0A0A0MT36	114 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	IGHV2OR16-5	A0A0B4J2B6	119 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235		A0A0D9SG52	128 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235		K7EMT4	169 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	CRX	O43186	299 aa	Predicted RBP	3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	RBFOX2	O43251	390 aa	Known RBP eCLIP	3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	OR7C2	O60412	319 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	S1PR2	O95136	353 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	MPC2	O95563	127 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	RAB36	O95755	333 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	OXT	P01178	125 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	IFNA1	P01562	189 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	HLA-A	P01891	365 aa	Known RBP	3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	OR5H8	P0DN80	308 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	HIST1H1C	P16403	213 aa	Known RBP	3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	HIST1H1T	P22492	207 aa	Predicted RBP	3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	RPA3	P35244	121 aa	Predicted RBP	3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	INPP1	P49441	399 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	ZNF138	P52744	262 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	ZNF121	P58317	390 aa	Predicted RBP	3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	PAFAH1B2	P68402	229 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	RUNX1	Q01196	453 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	RPL18A	Q02543	176 aa	Known RBP	3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	PRDX4	Q13162	271 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	IAH1	Q2TAA2	248 aa	Predicted RBP	3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	CBLN2	Q8IUK8	224 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	C20orf196	Q8IYI0	205 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	OR10G4	Q8NGN3	311 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	OR1J4	Q8NGS1	313 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	CANT1	Q8WVQ1	401 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	HIST1H2BA	Q96A08	127 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	WDR34	Q96EX3	536 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	MIEN1	Q9BRT3	115 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	FAAP24	Q9BTP7	215 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	SUCNR1	Q9BXA5	334 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	SLC25A2	Q9BXI2	301 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	CHRNA10	Q9GZZ6	450 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	LINC00597	Q9H2U6	94 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	DUSP21	Q9H596	190 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	REEP1	Q9H902	201 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	TAF9B	Q9HBM6	251 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	ISYNA1	Q9NPH2	558 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	MRPL27	Q9P0M9	148 aa	Known RBP	3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	NAT8	Q9UHE5	227 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	ZNF230	Q9UIE0	474 aa	Predicted RBP	3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	VAX2	Q9UIW0	290 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	JPT1	Q9UK76	154 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	ORC6	Q9Y5N6	252 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	ABCA2	Q9BZC7	2435 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	NF1	P21359	2839 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	MGA	Q8IWI9	3026 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	DOCK5	Q9H7D0	1870 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	KIF26A	Q9ULI4	1882 aa	Predicted RBP	3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	FLNC	Q14315	2725 aa		3.35	□□□□□ -1.87
TCF12-223	ENST00000561235	LRP4	O75096	1905 aa		3.34	□□□□□ -1.87
TCF12-223	ENST00000561235	CIT	O14578	2027 aa		3.34	□□□□□ -1.87
TCF12-223	ENST00000561235	F5	P12259	2224 aa		3.34	□□□□□ -1.87
TCF12-223	ENST00000561235	ICE1	Q9Y2F5	2266 aa		3.34	□□□□□ -1.87
TCF12-223	ENST00000561235	IGHV3-66	A0A0C4DH42	116 aa		3.34	□□□□□ -1.87
TCF12-223	ENST00000561235	SPAAR	A0A1B0GVQ0	90 aa		3.34	□□□□□ -1.87
TCF12-223	ENST00000561235	MFNG	O00587	321 aa		3.34	□□□□□ -1.87
TCF12-223	ENST00000561235	NME4	O00746	187 aa		3.34	□□□□□ -1.87
TCF12-223	ENST00000561235	CCL25	O15444	150 aa		3.34	□□□□□ -1.87
TCF12-223	ENST00000561235	LYRM1	O43325	122 aa		3.34	□□□□□ -1.87
TCF12-223	ENST00000561235	HBZ	P02008	142 aa		3.34	□□□□□ -1.87
TCF12-223	ENST00000561235	SERPINA7	P05543	415 aa		3.34	□□□□□ -1.87
TCF12-223	ENST00000561235	CSN2	P05814	226 aa		3.34	□□□□□ -1.87
TCF12-223	ENST00000561235	OR5AL1	P0C617	328 aa		3.34	□□□□□ -1.87
TCF12-223	ENST00000561235	OR4Q2	P0C623	313 aa		3.34	□□□□□ -1.87
TCF12-223	ENST00000561235	MPC1L	P0DKB6	136 aa		3.34	□□□□□ -1.87
TCF12-223	ENST00000561235	C8orf88	P0DMB2	117 aa		3.34	□□□□□ -1.87
TCF12-223	ENST00000561235	SULT1A3	P0DMM9	295 aa		3.34	□□□□□ -1.87
TCF12-223	ENST00000561235	SULT1A4	P0DMN0	295 aa		3.34	□□□□□ -1.87
TCF12-223	ENST00000561235	OR13C7	P0DN81	318 aa		3.34	□□□□□ -1.87
TCF12-223	ENST00000561235	ZNF32	P17041	273 aa		3.34	□□□□□ -1.87
TCF12-223	ENST00000561235	GZMH	P20718	246 aa		3.34	□□□□□ -1.87
TCF12-223	ENST00000561235	LGALS7	P47929	136 aa		3.34	□□□□□ -1.87
TCF12-223	ENST00000561235	TAS2R41	P59536	307 aa		3.34	□□□□□ -1.87
TCF12-223	ENST00000561235	TAS2R43	P59537	309 aa		3.34	□□□□□ -1.87
TCF12-223	ENST00000561235	H3F3A	P84243	136 aa		3.34	□□□□□ -1.87
TCF12-223	ENST00000561235	HTR4	Q13639	388 aa		3.34	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms