RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 OPN1MWP04001 364 aa10.37□□□□□ -0.75
SNX1-211ENST00000560829 OPN1MW2P0DN77 364 aa10.37□□□□□ -0.75
SNX1-211ENST00000560829 OPN1MW3P0DN78 364 aa10.37□□□□□ -0.75
SNX1-211ENST00000560829 RNASE2P10153 161 aaKnown RBP10.37□□□□□ -0.75
SNX1-211ENST00000560829 MAS1LP35410 378 aa10.37□□□□□ -0.75
SNX1-211ENST00000560829 DVL1P1P54792 670 aaPredicted RBP10.37□□□□□ -0.75
SNX1-211ENST00000560829 ATP5J2P56134 94 aa10.37□□□□□ -0.75
SNX1-211ENST00000560829 PRSS8Q16651 343 aa10.37□□□□□ -0.75
SNX1-211ENST00000560829 CLEC2AQ6UVW9 174 aa10.37□□□□□ -0.75
SNX1-211ENST00000560829 MMD2Q8IY49 270 aa10.37□□□□□ -0.75
SNX1-211ENST00000560829 SCRT1Q9BWW7 348 aa10.37□□□□□ -0.75
SNX1-211ENST00000560829 TPSG1Q9NRR2 321 aa10.37□□□□□ -0.75
SNX1-211ENST00000560829 SIGLEC9Q9Y336 463 aa10.37□□□□□ -0.75
SNX1-211ENST00000560829 E7EUB6 86 aa10.36□□□□□ -0.75
SNX1-211ENST00000560829 C17orf112F2Z3M2 114 aa10.36□□□□□ -0.75
SNX1-211ENST00000560829 AGPAT2O15120 278 aa10.36□□□□□ -0.75
SNX1-211ENST00000560829 HBE1P02100 147 aa10.36□□□□□ -0.75
SNX1-211ENST00000560829 ERHP84090 104 aaKnown RBP10.36□□□□□ -0.75
SNX1-211ENST00000560829 TMEM41BQ5BJD5 291 aa10.36□□□□□ -0.75
SNX1-211ENST00000560829 TREML4Q6UXN2 200 aa10.36□□□□□ -0.75
SNX1-211ENST00000560829 LHFPL4Q7Z7J7 247 aa10.36□□□□□ -0.75
SNX1-211ENST00000560829 MBD3L1Q8WWY6 194 aa10.36□□□□□ -0.75
SNX1-211ENST00000560829 TBX15Q96SF7 602 aa10.36□□□□□ -0.75
SNX1-211ENST00000560829 LSM4Q9Y4Z0 139 aaKnown RBP10.36□□□□□ -0.75
SNX1-211ENST00000560829 FAM157AC9JC47 383 aa10.36□□□□□ -0.75
SNX1-211ENST00000560829 TOX4O94842 621 aa10.36□□□□□ -0.75
SNX1-211ENST00000560829 MBP02144 154 aa10.36□□□□□ -0.75
SNX1-211ENST00000560829 UBE2E1P51965 193 aa10.36□□□□□ -0.75
SNX1-211ENST00000560829 AKR1C1Q04828 323 aa10.36□□□□□ -0.75
SNX1-211ENST00000560829 C10orf91Q5T1B1 145 aa10.36□□□□□ -0.75
SNX1-211ENST00000560829 CCDC144NLQ6NUI1 221 aa10.36□□□□□ -0.75
SNX1-211ENST00000560829 OR10W1Q8NGF6 305 aa10.36□□□□□ -0.75
SNX1-211ENST00000560829 VSIRQ9H7M9 311 aa10.36□□□□□ -0.75
SNX1-211ENST00000560829 NPVFQ9HCQ7 196 aa10.36□□□□□ -0.75
SNX1-211ENST00000560829 KIAA1456Q9P272 454 aa10.36□□□□□ -0.75
SNX1-211ENST00000560829 TBL2Q9Y4P3 447 aaKnown RBP10.36□□□□□ -0.75
SNX1-211ENST00000560829 MYO18BQ8IUG5 2567 aa10.35□□□□□ -0.75
SNX1-211ENST00000560829 IGHV4-61A0A0C4DH41 118 aa10.35□□□□□ -0.75
SNX1-211ENST00000560829 CNTFRP26992 372 aa10.35□□□□□ -0.75
SNX1-211ENST00000560829 DSCR9P59020 149 aa10.35□□□□□ -0.75
SNX1-211ENST00000560829 WT1-ASQ06250 92 aa10.35□□□□□ -0.75
SNX1-211ENST00000560829 ZNF726P1Q15940 193 aa10.35□□□□□ -0.75
SNX1-211ENST00000560829 ARSJQ5FYB0 599 aaPredicted RBP10.35□□□□□ -0.75
SNX1-211ENST00000560829 C10orf55Q5SWW7 151 aa10.35□□□□□ -0.75
SNX1-211ENST00000560829 ACSM6Q6P461 480 aa10.35□□□□□ -0.75
SNX1-211ENST00000560829 PPP1R27Q86WC6 154 aa10.35□□□□□ -0.75
SNX1-211ENST00000560829 ZNF709Q8N972 641 aa10.35□□□□□ -0.75
SNX1-211ENST00000560829 C1orf159Q96HA4 380 aa10.35□□□□□ -0.75
SNX1-211ENST00000560829 NARS2Q96I59 477 aaKnown RBP10.35□□□□□ -0.75
SNX1-211ENST00000560829 TREM1Q9NP99 234 aa10.35□□□□□ -0.75
SNX1-211ENST00000560829 FAM96BQ9Y3D0 163 aa10.35□□□□□ -0.75
SNX1-211ENST00000560829 HILPDAQ9Y5L2 63 aa10.35□□□□□ -0.75
SNX1-211ENST00000560829 IGKV1D-33P01593 117 aa10.34□□□□□ -0.75
SNX1-211ENST00000560829 IGKV1-33P01594 117 aa10.34□□□□□ -0.75
SNX1-211ENST00000560829 GUK1Q16774 197 aa10.34□□□□□ -0.75
SNX1-211ENST00000560829 NPBQ8NG41 125 aa10.34□□□□□ -0.75
SNX1-211ENST00000560829 SFT2D1Q8WV19 159 aa10.34□□□□□ -0.75
SNX1-211ENST00000560829 RCC1LQ96I51 464 aaKnown RBP10.34□□□□□ -0.75
SNX1-211ENST00000560829 PBDC1Q9BVG4 233 aa10.34□□□□□ -0.75
SNX1-211ENST00000560829 SMDT1Q9H4I9 107 aa10.34□□□□□ -0.75
SNX1-211ENST00000560829 TMEM231Q9H6L2 316 aa10.34□□□□□ -0.75
SNX1-211ENST00000560829 METTL1Q9UBP6 276 aaKnown RBP10.34□□□□□ -0.75
SNX1-211ENST00000560829 NDUFA3O95167 84 aa10.34□□□□□ -0.75
SNX1-211ENST00000560829 ADCYAP1P18509 176 aa10.34□□□□□ -0.75
SNX1-211ENST00000560829 OPRK1P41145 380 aa10.34□□□□□ -0.75
SNX1-211ENST00000560829 COMPP49747 757 aaPredicted RBP10.34□□□□□ -0.75
SNX1-211ENST00000560829 ELLP55199 621 aaPredicted RBP10.34□□□□□ -0.75
SNX1-211ENST00000560829 LGALS4P56470 323 aa10.34□□□□□ -0.75
SNX1-211ENST00000560829 RAB2AP61019 212 aa10.34□□□□□ -0.75
SNX1-211ENST00000560829 CCL20P78556 96 aa10.34□□□□□ -0.75
SNX1-211ENST00000560829 PAX8Q06710 450 aa10.34□□□□□ -0.75
SNX1-211ENST00000560829 EBI3Q14213 229 aa10.34□□□□□ -0.75
SNX1-211ENST00000560829 PEA15Q15121 130 aa10.34□□□□□ -0.75
SNX1-211ENST00000560829 PVRIGQ6DKI7 326 aa10.34□□□□□ -0.75
SNX1-211ENST00000560829 MRPL41Q8IXM3 137 aaKnown RBP10.34□□□□□ -0.75
SNX1-211ENST00000560829 RPP25LQ8N5L8 163 aaKnown RBP10.34□□□□□ -0.75
SNX1-211ENST00000560829 SEC11CQ9BY50 192 aa10.34□□□□□ -0.75
SNX1-211ENST00000560829 CARHSP1Q9Y2V2 147 aaKnown RBP10.34□□□□□ -0.75
SNX1-211ENST00000560829 DOCK11Q5JSL3 2073 aa10.33□□□□□ -0.76
SNX1-211ENST00000560829 IGHV4-30-2A0A087WSY4 118 aa10.33□□□□□ -0.76
SNX1-211ENST00000560829 A1L4Q6 167 aa10.33□□□□□ -0.76
SNX1-211ENST00000560829 SMCO3A2RU48 225 aa10.33□□□□□ -0.76
SNX1-211ENST00000560829 C9JQL5 133 aa10.33□□□□□ -0.76
SNX1-211ENST00000560829 ACTL6BO94805 426 aa10.33□□□□□ -0.76
SNX1-211ENST00000560829 MOSP00540 346 aa10.33□□□□□ -0.76
SNX1-211ENST00000560829 RPL27AP46776 148 aaKnown RBP10.33□□□□□ -0.76
SNX1-211ENST00000560829 TEPPQ6URK8 271 aa10.33□□□□□ -0.76
SNX1-211ENST00000560829 DYNAPQ8N1N2 210 aa10.33□□□□□ -0.76
SNX1-211ENST00000560829 ZNF114Q8NC26 417 aa10.33□□□□□ -0.76
SNX1-211ENST00000560829 RNASEH2CQ8TDP1 164 aaKnown RBP10.33□□□□□ -0.76
SNX1-211ENST00000560829 CACNG8Q8WXS5 425 aa10.33□□□□□ -0.76
SNX1-211ENST00000560829 MALSU1Q96EH3 234 aa10.33□□□□□ -0.76
SNX1-211ENST00000560829 MGST2Q99735 147 aa10.33□□□□□ -0.76
SNX1-211ENST00000560829 GGTLC1Q9BX51 225 aa10.33□□□□□ -0.76
SNX1-211ENST00000560829 FBXL15Q9H469 300 aa10.33□□□□□ -0.76
SNX1-211ENST00000560829 LPAR2Q9HBW0 351 aa10.33□□□□□ -0.76
SNX1-211ENST00000560829 KCNIP2Q9NS61 270 aa10.33□□□□□ -0.76
SNX1-211ENST00000560829 A0A1W2PRD5 423 aa10.32□□□□□ -0.76
SNX1-211ENST00000560829 A0A1W2PRF3 423 aa10.32□□□□□ -0.76
SNX1-211ENST00000560829 A0A1W2PRM7 423 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms