RNA–Protein interactions for RNA: ENST00000560801.5

TRPM1-212, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best)

Gene TRPM1, Length 4,454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-212ENST00000560801 VAX1Q5SQQ9 334 aa7.86□□□□□ -1.15
TRPM1-212ENST00000560801 LYZL2Q7Z4W2 148 aa7.86□□□□□ -1.15
TRPM1-212ENST00000560801 NPIPB3Q92617 1050 aa7.86□□□□□ -1.15
TRPM1-212ENST00000560801 PEF1Q9UBV8 284 aaKnown RBP7.86□□□□□ -1.15
TRPM1-212ENST00000560801 MELTFP08582 738 aa7.86□□□□□ -1.15
TRPM1-212ENST00000560801 CNN1P51911 297 aaKnown RBP7.86□□□□□ -1.15
TRPM1-212ENST00000560801 FFAR4Q5NUL3 377 aa7.86□□□□□ -1.15
TRPM1-212ENST00000560801 FAM78BQ5VT40 261 aa7.86□□□□□ -1.15
TRPM1-212ENST00000560801 BPIFA4PQ86YQ2 179 aa7.86□□□□□ -1.15
TRPM1-212ENST00000560801 ATG101Q9BSB4 218 aa7.86□□□□□ -1.15
TRPM1-212ENST00000560801 CABLES2Q9BTV7 478 aa7.86□□□□□ -1.15
TRPM1-212ENST00000560801 A0A0D9SG52 128 aa7.86□□□□□ -1.15
TRPM1-212ENST00000560801 DUXBA0A1W2PPF3 345 aa7.86□□□□□ -1.15
TRPM1-212ENST00000560801 FGF16O43320 207 aa7.86□□□□□ -1.15
TRPM1-212ENST00000560801 CDS2O95674 445 aa7.86□□□□□ -1.15
TRPM1-212ENST00000560801 UBA52P62987 128 aaKnown RBP7.86□□□□□ -1.15
TRPM1-212ENST00000560801 IZUMO4Q1ZYL8 232 aa7.86□□□□□ -1.15
TRPM1-212ENST00000560801 CLEC18BQ6UXF7 455 aa7.86□□□□□ -1.15
TRPM1-212ENST00000560801 ZNF818PQ6ZRF7 136 aa7.86□□□□□ -1.15
TRPM1-212ENST00000560801 CXorf65A6NEN9 183 aa7.85□□□□□ -1.15
TRPM1-212ENST00000560801 FAM24AA6NFZ4 105 aa7.85□□□□□ -1.15
TRPM1-212ENST00000560801 ZNF705EA8MWA4 302 aaPredicted RBP7.85□□□□□ -1.15
TRPM1-212ENST00000560801 NDUFB6O95139 128 aa7.85□□□□□ -1.15
TRPM1-212ENST00000560801 LINC00869P0C866 280 aa7.85□□□□□ -1.15
TRPM1-212ENST00000560801 RNF224P0DH78 156 aa7.85□□□□□ -1.15
TRPM1-212ENST00000560801 HOXB4P17483 251 aaPredicted RBP7.85□□□□□ -1.15
TRPM1-212ENST00000560801 SLC6A1P30531 599 aa7.85□□□□□ -1.15
TRPM1-212ENST00000560801 SRSF2Q01130 221 aaKnown RBP7.85□□□□□ -1.15
TRPM1-212ENST00000560801 NHLRC3Q5JS37 347 aa7.85□□□□□ -1.15
TRPM1-212ENST00000560801 BTNL8Q6UX41 500 aa7.85□□□□□ -1.15
TRPM1-212ENST00000560801 DNAH12Q6ZR08 3092 aa7.85□□□□□ -1.15
TRPM1-212ENST00000560801 OR11H12B2RN74 326 aa7.85□□□□□ -1.15
TRPM1-212ENST00000560801 OR2C1O95371 312 aa7.85□□□□□ -1.15
TRPM1-212ENST00000560801 LDLRAD3Q86YD5 345 aa7.85□□□□□ -1.15
TRPM1-212ENST00000560801 BCL6BQ8N143 479 aaPredicted RBP7.85□□□□□ -1.15
TRPM1-212ENST00000560801 OR2C3Q8N628 320 aa7.85□□□□□ -1.15
TRPM1-212ENST00000560801 PRR13Q9NZ81 148 aa7.85□□□□□ -1.15
TRPM1-212ENST00000560801 C9orf170A2RU37 121 aa7.85□□□□□ -1.15
TRPM1-212ENST00000560801 RPL35AP18077 110 aaKnown RBP7.85□□□□□ -1.15
TRPM1-212ENST00000560801 ERVK11-1P61568 191 aa7.85□□□□□ -1.15
TRPM1-212ENST00000560801 RELBQ01201 579 aa7.85□□□□□ -1.15
TRPM1-212ENST00000560801 HIST1H1AQ02539 215 aaPredicted RBP7.85□□□□□ -1.15
TRPM1-212ENST00000560801 OR5C1Q8NGR4 320 aa7.85□□□□□ -1.15
TRPM1-212ENST00000560801 CHRDL1Q9BU40 450 aa7.85□□□□□ -1.15
TRPM1-212ENST00000560801 NPVFQ9HCQ7 196 aa7.85□□□□□ -1.15
TRPM1-212ENST00000560801 FBXL17Q9UF56 701 aa7.85□□□□□ -1.15
TRPM1-212ENST00000560801 TRBV6-7A0A0A0MS04 114 aa7.84□□□□□ -1.15
TRPM1-212ENST00000560801 ANKRD20A5PA0PJZ0 165 aa7.84□□□□□ -1.15
TRPM1-212ENST00000560801 B2MP61769 119 aa7.84□□□□□ -1.15
TRPM1-212ENST00000560801 PRSS8Q16651 343 aa7.84□□□□□ -1.15
TRPM1-212ENST00000560801 C9orf66Q5T8R8 295 aa7.84□□□□□ -1.15
TRPM1-212ENST00000560801 SAMD13Q5VXD3 122 aa7.84□□□□□ -1.15
TRPM1-212ENST00000560801 PRR27Q6MZM9 219 aa7.84□□□□□ -1.15
TRPM1-212ENST00000560801 TMEM222Q9H0R3 208 aa7.84□□□□□ -1.15
TRPM1-212ENST00000560801 TECRQ9NZ01 308 aaKnown RBP7.84□□□□□ -1.15
TRPM1-212ENST00000560801 SIGLEC9Q9Y336 463 aa7.84□□□□□ -1.15
TRPM1-212ENST00000560801 MED12LQ86YW9 2145 aa7.84□□□□□ -1.15
TRPM1-212ENST00000560801 CD5P06127 495 aa7.84□□□□□ -1.15
TRPM1-212ENST00000560801 HERPUD1Q15011 391 aa7.84□□□□□ -1.15
TRPM1-212ENST00000560801 NABP2Q9BQ15 211 aa7.84□□□□□ -1.15
TRPM1-212ENST00000560801 NIPSNAP3BQ9BS92 247 aa7.84□□□□□ -1.15
TRPM1-212ENST00000560801 PLXNB3Q9ULL4 1909 aa7.84□□□□□ -1.15
TRPM1-212ENST00000560801 CCL24O00175 119 aa7.84□□□□□ -1.15
TRPM1-212ENST00000560801 RGS13O14921 159 aa7.84□□□□□ -1.15
TRPM1-212ENST00000560801 ADAP1O75689 374 aa7.84□□□□□ -1.15
TRPM1-212ENST00000560801 JTBO76095 146 aa7.84□□□□□ -1.15
TRPM1-212ENST00000560801 ATP5IP56385 69 aaPredicted RBP7.84□□□□□ -1.15
TRPM1-212ENST00000560801 ZNF600Q6ZNG1 722 aa7.84□□□□□ -1.15
TRPM1-212ENST00000560801 RNF141Q8WVD5 230 aa7.84□□□□□ -1.15
TRPM1-212ENST00000560801 ADAMTS20P59510 1910 aa7.84□□□□□ -1.15
TRPM1-212ENST00000560801 UPK2O00526 184 aa7.84□□□□□ -1.16
TRPM1-212ENST00000560801 ATP6V0E1O15342 81 aa7.84□□□□□ -1.16
TRPM1-212ENST00000560801 IGFBP3P17936 291 aaPredicted RBP7.84□□□□□ -1.16
TRPM1-212ENST00000560801 PLAC9Q5JTB6 97 aa7.84□□□□□ -1.16
TRPM1-212ENST00000560801 TMEM182Q6ZP80 229 aaPredicted RBP7.84□□□□□ -1.16
TRPM1-212ENST00000560801 MITD1Q8WV92 249 aa7.84□□□□□ -1.16
TRPM1-212ENST00000560801 H2AFB1P0C5Y9 115 aa7.83□□□□□ -1.16
TRPM1-212ENST00000560801 TFF3Q07654 80 aa7.83□□□□□ -1.16
TRPM1-212ENST00000560801 HMGN3Q15651 99 aa7.83□□□□□ -1.16
TRPM1-212ENST00000560801 Q6P435 159 aa7.83□□□□□ -1.16
TRPM1-212ENST00000560801 WDR86Q86TI4 376 aa7.83□□□□□ -1.16
TRPM1-212ENST00000560801 OR51G1Q8NGK1 321 aa7.83□□□□□ -1.16
TRPM1-212ENST00000560801 TMEM167AQ8TBQ9 72 aa7.83□□□□□ -1.16
TRPM1-212ENST00000560801 MST1LQ2TV78 715 aa7.83□□□□□ -1.16
TRPM1-212ENST00000560801 STPG2Q8N412 459 aa7.83□□□□□ -1.16
TRPM1-212ENST00000560801 C15orf54Q8N8G6 183 aa7.83□□□□□ -1.16
TRPM1-212ENST00000560801 IL22RA2Q969J5 263 aa7.83□□□□□ -1.16
TRPM1-212ENST00000560801 MED9Q9NWA0 146 aa7.83□□□□□ -1.16
TRPM1-212ENST00000560801 GOLT1BQ9Y3E0 138 aa7.83□□□□□ -1.16
TRPM1-212ENST00000560801 SNURFLB1AK76 121 aa7.83□□□□□ -1.16
TRPM1-212ENST00000560801 RNASEK-C17orf49H0YIS7 233 aa7.83□□□□□ -1.16
TRPM1-212ENST00000560801 ZNF737O75373 536 aa7.83□□□□□ -1.16
TRPM1-212ENST00000560801 CLN5O75503 358 aa7.83□□□□□ -1.16
TRPM1-212ENST00000560801 CTF1Q16619 201 aa7.83□□□□□ -1.16
TRPM1-212ENST00000560801 PPP1R1CQ8WVI7 109 aa7.83□□□□□ -1.16
TRPM1-212ENST00000560801 TBX15Q96SF7 602 aa7.83□□□□□ -1.16
TRPM1-212ENST00000560801 KMT2EQ8IZD2 1858 aa7.83□□□□□ -1.16
TRPM1-212ENST00000560801 SNRPCP09234 159 aaKnown RBP7.82□□□□□ -1.16
TRPM1-212ENST00000560801 SMIM18P0DKX4 95 aa7.82□□□□□ -1.16
TRPM1-212ENST00000560801 DUTP33316 252 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms