RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 U3KQ87 197 aa11□□□□□ -0.65
PKNOX1-209ENST00000560448 PIGBOS1A0A0B4J2F0 54 aa10.99□□□□□ -0.65
PKNOX1-209ENST00000560448 ATP6V1G1O75348 118 aa10.99□□□□□ -0.65
PKNOX1-209ENST00000560448 ATG12O94817 140 aa10.99□□□□□ -0.65
PKNOX1-209ENST00000560448 CNIH1O95406 144 aa10.99□□□□□ -0.65
PKNOX1-209ENST00000560448 C4BPBP20851 252 aa10.99□□□□□ -0.65
PKNOX1-209ENST00000560448 PPIFP30405 207 aaKnown RBP10.99□□□□□ -0.65
PKNOX1-209ENST00000560448 ERVK-16P61578 105 aa10.99□□□□□ -0.65
PKNOX1-209ENST00000560448 FXYD3Q14802 87 aa10.99□□□□□ -0.65
PKNOX1-209ENST00000560448 PRSS8Q16651 343 aa10.99□□□□□ -0.65
PKNOX1-209ENST00000560448 LRRC37A5PQ49AS3 106 aa10.99□□□□□ -0.65
PKNOX1-209ENST00000560448 PUSL1Q8N0Z8 303 aaKnown RBP10.99□□□□□ -0.65
PKNOX1-209ENST00000560448 OR4F17Q8NGA8 305 aa10.99□□□□□ -0.65
PKNOX1-209ENST00000560448 TMEM56Q96MV1 263 aa10.99□□□□□ -0.65
PKNOX1-209ENST00000560448 OR4F4Q96R69 305 aa10.99□□□□□ -0.65
PKNOX1-209ENST00000560448 MFFQ9GZY8 342 aa10.99□□□□□ -0.65
PKNOX1-209ENST00000560448 TMEM222Q9H0R3 208 aa10.99□□□□□ -0.65
PKNOX1-209ENST00000560448 TMEM56-RWDD3S4R434 201 aa10.99□□□□□ -0.65
PKNOX1-209ENST00000560448 TCRBV4S1A1TA0A5B7 111 aa10.98□□□□□ -0.65
PKNOX1-209ENST00000560448 RNF222A6NCQ9 220 aa10.98□□□□□ -0.65
PKNOX1-209ENST00000560448 LINC01548A6NM66 108 aa10.98□□□□□ -0.65
PKNOX1-209ENST00000560448 H0Y980 276 aa10.98□□□□□ -0.65
PKNOX1-209ENST00000560448 H3BUA1 57 aa10.98□□□□□ -0.65
PKNOX1-209ENST00000560448 RAMP3O60896 148 aa10.98□□□□□ -0.65
PKNOX1-209ENST00000560448 BRI3O95415 125 aa10.98□□□□□ -0.65
PKNOX1-209ENST00000560448 IFNA21P01568 189 aa10.98□□□□□ -0.65
PKNOX1-209ENST00000560448 CD28P10747 220 aa10.98□□□□□ -0.65
PKNOX1-209ENST00000560448 ZNF345Q14585 488 aa10.98□□□□□ -0.65
PKNOX1-209ENST00000560448 NDUFA5Q16718 116 aa10.98□□□□□ -0.65
PKNOX1-209ENST00000560448 OR2B11Q5JQS5 317 aa10.98□□□□□ -0.65
PKNOX1-209ENST00000560448 THOC7Q6I9Y2 204 aaKnown RBP10.98□□□□□ -0.65
PKNOX1-209ENST00000560448 LYZL2Q7Z4W2 148 aa10.98□□□□□ -0.65
PKNOX1-209ENST00000560448 KCNRGQ8N5I3 272 aa10.98□□□□□ -0.65
PKNOX1-209ENST00000560448 ZNF680Q8NEM1 530 aa10.98□□□□□ -0.65
PKNOX1-209ENST00000560448 THAP6Q8TBB0 222 aa10.98□□□□□ -0.65
PKNOX1-209ENST00000560448 SPIN2AQ99865 258 aa10.98□□□□□ -0.65
PKNOX1-209ENST00000560448 CITED2Q99967 270 aaPredicted RBP10.98□□□□□ -0.65
PKNOX1-209ENST00000560448 SPIN2BQ9BPZ2 258 aa10.98□□□□□ -0.65
PKNOX1-209ENST00000560448 MBD2Q9UBB5 411 aa10.98□□□□□ -0.65
PKNOX1-209ENST00000560448 FOXA2Q9Y261 457 aaPredicted RBP10.98□□□□□ -0.65
PKNOX1-209ENST00000560448 TENM1Q9UKZ4 2725 aa10.98□□□□□ -0.65
PKNOX1-209ENST00000560448 A0A0D9SG52 128 aa10.97□□□□□ -0.65
PKNOX1-209ENST00000560448 MARCH11A6NNE9 402 aa10.97□□□□□ -0.65
PKNOX1-209ENST00000560448 FCN1O00602 326 aa10.97□□□□□ -0.65
PKNOX1-209ENST00000560448 CDS2O95674 445 aa10.97□□□□□ -0.65
PKNOX1-209ENST00000560448 CFDP00746 253 aaPredicted RBP10.97□□□□□ -0.65
PKNOX1-209ENST00000560448 IGLV1-40P01703 118 aa10.97□□□□□ -0.65
PKNOX1-209ENST00000560448 UCP1P25874 307 aa10.97□□□□□ -0.65
PKNOX1-209ENST00000560448 PSMB8P28062 276 aa10.97□□□□□ -0.65
PKNOX1-209ENST00000560448 SRPXP78539 464 aa10.97□□□□□ -0.65
PKNOX1-209ENST00000560448 NDPQ00604 133 aa10.97□□□□□ -0.65
PKNOX1-209ENST00000560448 OR2F1Q13607 317 aa10.97□□□□□ -0.65
PKNOX1-209ENST00000560448 IAH1Q2TAA2 248 aaPredicted RBP10.97□□□□□ -0.65
PKNOX1-209ENST00000560448 C19orf54Q5BKX5 351 aa10.97□□□□□ -0.65
PKNOX1-209ENST00000560448 PRSS54Q6PEW0 395 aa10.97□□□□□ -0.65
PKNOX1-209ENST00000560448 ACOT7LQ6ZUV0 252 aa10.97□□□□□ -0.65
PKNOX1-209ENST00000560448 ZNF329Q86UD4 541 aa10.97□□□□□ -0.65
PKNOX1-209ENST00000560448 SELENOHQ8IZQ5 122 aaKnown RBP10.97□□□□□ -0.65
PKNOX1-209ENST00000560448 ABHD5Q8WTS1 349 aa10.97□□□□□ -0.65
PKNOX1-209ENST00000560448 CLCC1Q96S66 551 aa10.97□□□□□ -0.65
PKNOX1-209ENST00000560448 SERPINE2P07093 398 aa10.96□□□□□ -0.65
PKNOX1-209ENST00000560448 RPL8P62917 257 aaKnown RBP10.96□□□□□ -0.65
PKNOX1-209ENST00000560448 RAB32Q13637 225 aa10.96□□□□□ -0.65
PKNOX1-209ENST00000560448 TCTEX1D4Q5JR98 221 aa10.96□□□□□ -0.65
PKNOX1-209ENST00000560448 OR4A47Q6IF82 309 aa10.96□□□□□ -0.65
PKNOX1-209ENST00000560448 DMBX1Q8NFW5 382 aa10.96□□□□□ -0.65
PKNOX1-209ENST00000560448 SRSF12Q8WXF0 261 aaKnown RBP10.96□□□□□ -0.65
PKNOX1-209ENST00000560448 RBMXL1Q96E39 390 aaKnown RBP10.96□□□□□ -0.65
PKNOX1-209ENST00000560448 GPHA2Q96T91 129 aa10.96□□□□□ -0.65
PKNOX1-209ENST00000560448 SRSF8Q9BRL6 282 aaKnown RBP10.96□□□□□ -0.65
PKNOX1-209ENST00000560448 ARL6Q9H0F7 186 aa10.96□□□□□ -0.65
PKNOX1-209ENST00000560448 ZNF430Q9H8G1 570 aaPredicted RBP10.96□□□□□ -0.65
PKNOX1-209ENST00000560448 TPSG1Q9NRR2 321 aa10.96□□□□□ -0.65
PKNOX1-209ENST00000560448 LINC00527Q9UJ94 153 aa10.96□□□□□ -0.65
PKNOX1-209ENST00000560448 TMED3Q9Y3Q3 217 aa10.96□□□□□ -0.65
PKNOX1-209ENST00000560448 DUXBA0A1W2PPF3 345 aa10.95□□□□□ -0.66
PKNOX1-209ENST00000560448 IL6RP08887 468 aaPredicted RBP10.95□□□□□ -0.66
PKNOX1-209ENST00000560448 EGR2P11161 476 aaPredicted RBP10.95□□□□□ -0.66
PKNOX1-209ENST00000560448 CDX1P47902 265 aaPredicted RBP10.95□□□□□ -0.66
PKNOX1-209ENST00000560448 RPL23AP62750 156 aaKnown RBP10.95□□□□□ -0.66
PKNOX1-209ENST00000560448 TNXAQ16473 311 aa10.95□□□□□ -0.66
PKNOX1-209ENST00000560448 ECSCRQ19T08 205 aa10.95□□□□□ -0.66
PKNOX1-209ENST00000560448 TMEM268Q5VZI3 342 aa10.95□□□□□ -0.66
PKNOX1-209ENST00000560448 UNQ5815/PRO19632Q6UWF5 114 aa10.95□□□□□ -0.66
PKNOX1-209ENST00000560448 SLC7A5P1Q8MH63 180 aa10.95□□□□□ -0.66
PKNOX1-209ENST00000560448 SLC35G3Q8N808 338 aa10.95□□□□□ -0.66
PKNOX1-209ENST00000560448 C11orf44Q8N8P7 122 aa10.95□□□□□ -0.66
PKNOX1-209ENST00000560448 LFNGQ8NES3 379 aa10.95□□□□□ -0.66
PKNOX1-209ENST00000560448 MYOZ3Q8TDC0 251 aa10.95□□□□□ -0.66
PKNOX1-209ENST00000560448 IL22RA2Q969J5 263 aa10.95□□□□□ -0.66
PKNOX1-209ENST00000560448 R3HDM4Q96D70 268 aa10.95□□□□□ -0.66
PKNOX1-209ENST00000560448 RRNAD1Q96FB5 475 aaKnown RBP10.95□□□□□ -0.66
PKNOX1-209ENST00000560448 UBE2E2Q96LR5 201 aa10.95□□□□□ -0.66
PKNOX1-209ENST00000560448 FKBP11Q9NYL4 201 aa10.95□□□□□ -0.66
PKNOX1-209ENST00000560448 OR5AC2Q9NZP5 309 aa10.95□□□□□ -0.66
PKNOX1-209ENST00000560448 GSKIPQ9P0R6 139 aa10.95□□□□□ -0.66
PKNOX1-209ENST00000560448 A0A1W2PN81 502 aa10.94□□□□□ -0.66
PKNOX1-209ENST00000560448 G3V318 75 aa10.94□□□□□ -0.66
PKNOX1-209ENST00000560448 S1PR2O95136 353 aa10.94□□□□□ -0.66
PKNOX1-209ENST00000560448 CHRNA7P36544 502 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms